RNA–Protein interactions for RNA: ENST00000409498.6

SUMO1-207, Transcript of small ubiquitin-like modifier 1, humanhuman

TSL 3 BASIC

Gene SUMO1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-207ENST00000409498 CRKLP46109 303 aaKnown RBP19.28■□□□□ 0.68
SUMO1-207ENST00000409498 MBIPQ9NS73 344 aa19.27■□□□□ 0.68
SUMO1-207ENST00000409498 USP16Q9Y5T5 823 aa19.27■□□□□ 0.68
SUMO1-207ENST00000409498 AMIGO3Q86WK7 504 aa19.26■□□□□ 0.67
SUMO1-207ENST00000409498 SLC16A10Q8TF71 515 aa19.26■□□□□ 0.67
SUMO1-207ENST00000409498 CCDC87Q9NVE4 849 aa19.26■□□□□ 0.67
SUMO1-207ENST00000409498 LAMB4A4D0S4 1761 aa19.26■□□□□ 0.67
SUMO1-207ENST00000409498 PRAMEF22A3QJZ6 481 aa19.25■□□□□ 0.67
SUMO1-207ENST00000409498 GNPATO15228 680 aa19.25■□□□□ 0.67
SUMO1-207ENST00000409498 COL23A1Q86Y22 540 aaPredicted RBP19.25■□□□□ 0.67
SUMO1-207ENST00000409498 RTCBQ9Y3I0 505 aaKnown RBP19.25■□□□□ 0.67
SUMO1-207ENST00000409498 SENP3-EIF4A1A0A087X0R7 540 aa19.24■□□□□ 0.67
SUMO1-207ENST00000409498 HOXB7P09629 217 aa19.24■□□□□ 0.67
SUMO1-207ENST00000409498 PDGFDQ9GZP0 370 aaPredicted RBP19.24■□□□□ 0.67
SUMO1-207ENST00000409498 LAS1LQ9Y4W2 734 aaKnown RBP19.24■□□□□ 0.67
SUMO1-207ENST00000409498 COL24A1Q17RW2 1714 aa19.23■□□□□ 0.67
SUMO1-207ENST00000409498 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.23■□□□□ 0.67
SUMO1-207ENST00000409498 ZBTB1Q9Y2K1 713 aa19.23■□□□□ 0.67
SUMO1-207ENST00000409498 SALL2Q9Y467 1007 aaPredicted RBP19.23■□□□□ 0.67
SUMO1-207ENST00000409498 SOS1Q07889 1333 aaPredicted RBP19.23■□□□□ 0.67
SUMO1-207ENST00000409498 IL6STP40189 918 aaPredicted RBP19.22■□□□□ 0.67
SUMO1-207ENST00000409498 EIF5P55010 431 aaKnown RBP19.22■□□□□ 0.67
SUMO1-207ENST00000409498 TRAPPC3LQ5T215 181 aa19.22■□□□□ 0.67
SUMO1-207ENST00000409498 ERBB4Q15303 1308 aa19.21■□□□□ 0.67
SUMO1-207ENST00000409498 A1BGP04217 495 aa19.2■□□□□ 0.66
SUMO1-207ENST00000409498 ARHGEF1Q92888 912 aaKnown RBP19.2■□□□□ 0.66
SUMO1-207ENST00000409498 MTFR1LQ9H019 292 aa19.2■□□□□ 0.66
SUMO1-207ENST00000409498 PIAS4Q8N2W9 510 aaPredicted RBP19.19■□□□□ 0.66
SUMO1-207ENST00000409498 SPINK5Q9NQ38 1064 aaPredicted RBP19.19■□□□□ 0.66
SUMO1-207ENST00000409498 C4AP0C0L4 1744 aa19.19■□□□□ 0.66
SUMO1-207ENST00000409498 NBPF26B4DH59 902 aa19.18■□□□□ 0.66
SUMO1-207ENST00000409498 KRT24Q2M2I5 525 aa19.18■□□□□ 0.66
SUMO1-207ENST00000409498 NBPF10Q6P3W6 841 aaKnown RBP19.18■□□□□ 0.66
SUMO1-207ENST00000409498 SMIM5Q71RC9 77 aa19.18■□□□□ 0.66
SUMO1-207ENST00000409498 NBPF15Q8N660 670 aa19.18■□□□□ 0.66
SUMO1-207ENST00000409498 COL15A1P39059 1388 aa19.18■□□□□ 0.66
SUMO1-207ENST00000409498 PHF14O94880 888 aa19.17■□□□□ 0.66
SUMO1-207ENST00000409498 CANXP27824 592 aaKnown RBP19.17■□□□□ 0.66
SUMO1-207ENST00000409498 GOLGA2Q08379 1002 aa19.17■□□□□ 0.66
SUMO1-207ENST00000409498 DUSP27Q5VZP5 1158 aa19.17■□□□□ 0.66
SUMO1-207ENST00000409498 TSR2Q969E8 191 aaKnown RBP19.17■□□□□ 0.66
SUMO1-207ENST00000409498 FANCIQ9NVI1 1328 aa19.17■□□□□ 0.66
SUMO1-207ENST00000409498 LRP5O75197 1615 aa19.17■□□□□ 0.66
SUMO1-207ENST00000409498 A0A087WZG4 1122 aa19.16■□□□□ 0.66
SUMO1-207ENST00000409498 PDIA6Q15084 440 aa19.16■□□□□ 0.66
SUMO1-207ENST00000409498 C8orf58Q8NAV2 365 aa19.16■□□□□ 0.66
SUMO1-207ENST00000409498 SGIP1Q9BQI5 828 aa19.16■□□□□ 0.66
SUMO1-207ENST00000409498 MYH16Q9H6N6 1097 aa19.16■□□□□ 0.66
SUMO1-207ENST00000409498 NARFQ9UHQ1 456 aa19.16■□□□□ 0.66
SUMO1-207ENST00000409498 RFC4P35249 363 aa19.15■□□□□ 0.66
SUMO1-207ENST00000409498 LRP10Q7Z4F1 713 aa19.15■□□□□ 0.66
SUMO1-207ENST00000409498 TRMT2AQ8IZ69 625 aaKnown RBP19.15■□□□□ 0.66
SUMO1-207ENST00000409498 CHMP4AQ9BY43 222 aa19.15■□□□□ 0.66
SUMO1-207ENST00000409498 SPON1Q9HCB6 807 aa19.15■□□□□ 0.66
SUMO1-207ENST00000409498 USP42Q9H9J4 1324 aaKnown RBP19.15■□□□□ 0.66
SUMO1-207ENST00000409498 E9PSI1 815 aa19.14■□□□□ 0.65
SUMO1-207ENST00000409498 RGL2O15211 777 aa19.14■□□□□ 0.65
SUMO1-207ENST00000409498 ZBTB7AO95365 584 aa19.14■□□□□ 0.65
SUMO1-207ENST00000409498 PTGER2P43116 358 aa19.14■□□□□ 0.65
SUMO1-207ENST00000409498 SLFN5Q08AF3 891 aa19.14■□□□□ 0.65
SUMO1-207ENST00000409498 GYS1P13807 737 aa19.13■□□□□ 0.65
SUMO1-207ENST00000409498 MSH5O43196 834 aa19.12■□□□□ 0.65
SUMO1-207ENST00000409498 EIF2S2P20042 333 aaKnown RBP19.12■□□□□ 0.65
SUMO1-207ENST00000409498 NLGN1Q8N2Q7 840 aa19.12■□□□□ 0.65
SUMO1-207ENST00000409498 TSPYL6Q8N831 410 aa19.12■□□□□ 0.65
SUMO1-207ENST00000409498 DDX21Q9NR30 783 aaKnown RBP eCLIP19.12■□□□□ 0.65
SUMO1-207ENST00000409498 HDGFL1Q5TGJ6 251 aa19.11■□□□□ 0.65
SUMO1-207ENST00000409498 BCL2L12Q9HB09 334 aa19.11■□□□□ 0.65
SUMO1-207ENST00000409498 ATF5Q9Y2D1 282 aaPredicted RBP19.11■□□□□ 0.65
SUMO1-207ENST00000409498 ZPR1O75312 459 aa19.1■□□□□ 0.65
SUMO1-207ENST00000409498 VAMP4O75379 141 aa19.1■□□□□ 0.65
SUMO1-207ENST00000409498 PIP4K2AP48426 406 aaPredicted RBP19.1■□□□□ 0.65
SUMO1-207ENST00000409498 HNRNPUQ00839 825 aaKnown RBP eCLIP19.1■□□□□ 0.65
SUMO1-207ENST00000409498 TWISTNBQ3B726 338 aaPredicted RBP19.1■□□□□ 0.65
SUMO1-207ENST00000409498 DBF4Q9UBU7 674 aaPredicted RBP19.1■□□□□ 0.65
SUMO1-207ENST00000409498 BCORQ6W2J9 1755 aa19.09■□□□□ 0.65
SUMO1-207ENST00000409498 SCN7AQ01118 1682 aa19.09■□□□□ 0.65
SUMO1-207ENST00000409498 ELL2O00472 640 aaPredicted RBP19.09■□□□□ 0.65
SUMO1-207ENST00000409498 CAMTA2O94983 1202 aa19.09■□□□□ 0.65
SUMO1-207ENST00000409498 EXOSC9Q06265 439 aaKnown RBP19.09■□□□□ 0.65
SUMO1-207ENST00000409498 USPL1Q5W0Q7 1092 aa19.09■□□□□ 0.65
SUMO1-207ENST00000409498 NPM2Q86SE8 214 aaKnown RBP19.09■□□□□ 0.65
SUMO1-207ENST00000409498 DZIP3Q86Y13 1208 aaKnown RBP19.09■□□□□ 0.65
SUMO1-207ENST00000409498 SRP68Q9UHB9 627 aaKnown RBP19.09■□□□□ 0.65
SUMO1-207ENST00000409498 ZBED9Q6R2W3 1325 aa19.08■□□□□ 0.65
SUMO1-207ENST00000409498 PROSER3Q2NL68 480 aa19.08■□□□□ 0.64
SUMO1-207ENST00000409498 CCDC30Q5VVM6 783 aa19.08■□□□□ 0.64
SUMO1-207ENST00000409498 CLEC4GQ6UXB4 293 aa19.08■□□□□ 0.64
SUMO1-207ENST00000409498 CDCA7LQ96GN5 454 aa19.08■□□□□ 0.64
SUMO1-207ENST00000409498 TBC1D2BQ9UPU7 963 aa19.08■□□□□ 0.64
SUMO1-207ENST00000409498 ERVV-1B6SEH8 477 aa19.07■□□□□ 0.64
SUMO1-207ENST00000409498 MYL6BP14649 208 aa19.07■□□□□ 0.64
SUMO1-207ENST00000409498 POLD1P28340 1107 aa19.07■□□□□ 0.64
SUMO1-207ENST00000409498 TM4SF1P30408 202 aa19.07■□□□□ 0.64
SUMO1-207ENST00000409498 FKBP8Q14318 412 aa19.07■□□□□ 0.64
SUMO1-207ENST00000409498 CHPF2Q9P2E5 772 aa19.07■□□□□ 0.64
SUMO1-207ENST00000409498 HYPKQ9NX55 129 aa19.06■□□□□ 0.64
SUMO1-207ENST00000409498 ZNF330Q9Y3S2 320 aaPredicted RBP19.06■□□□□ 0.64
SUMO1-207ENST00000409498 CACNA1FO60840 1977 aa19.06■□□□□ 0.64
SUMO1-207ENST00000409498 MSL1Q68DK7 614 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms