RNA–Protein interactions for RNA: ENST00000409057.5

PBRM1-205, Transcript of polybromo 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PBRM1, Length 4,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-205ENST00000409057 IL16Q14005 1332 aa12.47□□□□□ -0.41
PBRM1-205ENST00000409057 IDH1O75874 414 aaKnown RBP12.47□□□□□ -0.41
PBRM1-205ENST00000409057 HMGB1P09429 215 aaKnown RBP12.47□□□□□ -0.41
PBRM1-205ENST00000409057 UBE2HP62256 183 aa12.47□□□□□ -0.41
PBRM1-205ENST00000409057 FLIIQ13045 1269 aa12.47□□□□□ -0.41
PBRM1-205ENST00000409057 LRSAM1Q6UWE0 723 aa12.47□□□□□ -0.41
PBRM1-205ENST00000409057 BIVM-ERCC5R4GMW8 1640 aa12.47□□□□□ -0.41
PBRM1-205ENST00000409057 PEG3Q9GZU2 1588 aa12.47□□□□□ -0.41
PBRM1-205ENST00000409057 MAP9Q49MG5 647 aa12.47□□□□□ -0.41
PBRM1-205ENST00000409057 PPP4R3BQ5MIZ7 849 aa12.47□□□□□ -0.41
PBRM1-205ENST00000409057 THOC2Q8NI27 1593 aaKnown RBP12.47□□□□□ -0.41
PBRM1-205ENST00000409057 AMOTQ4VCS5 1084 aa12.47□□□□□ -0.41
PBRM1-205ENST00000409057 URB2Q14146 1524 aaKnown RBP12.47□□□□□ -0.41
PBRM1-205ENST00000409057 KIF4BQ2VIQ3 1234 aa12.47□□□□□ -0.41
PBRM1-205ENST00000409057 USHBP1Q8N6Y0 703 aa12.47□□□□□ -0.41
PBRM1-205ENST00000409057 JAKMIP3Q5VZ66 844 aa12.46□□□□□ -0.41
PBRM1-205ENST00000409057 BMP2KQ9NSY1 1161 aaPredicted RBP12.46□□□□□ -0.41
PBRM1-205ENST00000409057 CASQ1P31415 396 aa12.46□□□□□ -0.41
PBRM1-205ENST00000409057 ZNF165P49910 485 aa12.46□□□□□ -0.41
PBRM1-205ENST00000409057 SOGA3Q5TF21 947 aa12.46□□□□□ -0.41
PBRM1-205ENST00000409057 NEFHP12036 1026 aa12.46□□□□□ -0.42
PBRM1-205ENST00000409057 C8orf76Q96K31 380 aa12.46□□□□□ -0.42
PBRM1-205ENST00000409057 TRMT1Q9NXH9 659 aaKnown RBP12.46□□□□□ -0.42
PBRM1-205ENST00000409057 RBM27Q9P2N5 1060 aaKnown RBP12.46□□□□□ -0.42
PBRM1-205ENST00000409057 MCM3P25205 808 aa12.46□□□□□ -0.42
PBRM1-205ENST00000409057 DBF4Q9UBU7 674 aaPredicted RBP12.46□□□□□ -0.42
PBRM1-205ENST00000409057 PTCD1O75127 700 aaKnown RBP12.45□□□□□ -0.42
PBRM1-205ENST00000409057 TTC22Q5TAA0 569 aa12.45□□□□□ -0.42
PBRM1-205ENST00000409057 MBIPQ9NS73 344 aa12.45□□□□□ -0.42
PBRM1-205ENST00000409057 SHTN1A0MZ66 631 aa12.45□□□□□ -0.42
PBRM1-205ENST00000409057 TAF4BQ92750 862 aa12.45□□□□□ -0.42
PBRM1-205ENST00000409057 PAXBP1Q9Y5B6 917 aa12.45□□□□□ -0.42
PBRM1-205ENST00000409057 RALGAPBQ86X10 1494 aa12.45□□□□□ -0.42
PBRM1-205ENST00000409057 ANKRD36BQ8N2N9 1353 aa12.45□□□□□ -0.42
PBRM1-205ENST00000409057 C8orf34Q49A92 452 aa12.45□□□□□ -0.42
PBRM1-205ENST00000409057 ZMYND15Q9H091 742 aa12.45□□□□□ -0.42
PBRM1-205ENST00000409057 CCDC8Q9H0W5 538 aaPredicted RBP12.45□□□□□ -0.42
PBRM1-205ENST00000409057 NUCB1Q02818 461 aa12.45□□□□□ -0.42
PBRM1-205ENST00000409057 ZNF397Q8NF99 534 aaPredicted RBP12.45□□□□□ -0.42
PBRM1-205ENST00000409057 MYD88Q99836 296 aa12.45□□□□□ -0.42
PBRM1-205ENST00000409057 LRP2BPQ9P2M1 347 aa12.45□□□□□ -0.42
PBRM1-205ENST00000409057 PHF8Q9UPP1 1060 aa12.45□□□□□ -0.42
PBRM1-205ENST00000409057 AMOTL2Q9Y2J4 779 aa12.45□□□□□ -0.42
PBRM1-205ENST00000409057 STX1AQ16623 288 aa12.44□□□□□ -0.42
PBRM1-205ENST00000409057 METTL24Q5JXM2 366 aa12.44□□□□□ -0.42
PBRM1-205ENST00000409057 SNX21Q969T3 373 aa12.44□□□□□ -0.42
PBRM1-205ENST00000409057 AIDAQ96BJ3 306 aa12.44□□□□□ -0.42
PBRM1-205ENST00000409057 ZHX3Q9H4I2 956 aa12.44□□□□□ -0.42
PBRM1-205ENST00000409057 TTC21BQ7Z4L5 1316 aa12.44□□□□□ -0.42
PBRM1-205ENST00000409057 HCLS1P14317 486 aaPredicted RBP12.44□□□□□ -0.42
PBRM1-205ENST00000409057 MPRIPQ6WCQ1 1025 aa12.44□□□□□ -0.42
PBRM1-205ENST00000409057 PLCD4Q9BRC7 762 aa12.44□□□□□ -0.42
PBRM1-205ENST00000409057 PCDHB15Q9Y5E8 787 aa12.44□□□□□ -0.42
PBRM1-205ENST00000409057 GJB2P29033 226 aa12.44□□□□□ -0.42
PBRM1-205ENST00000409057 TAX1BP1Q86VP1 789 aa12.44□□□□□ -0.42
PBRM1-205ENST00000409057 FSIP1Q8NA03 581 aa12.44□□□□□ -0.42
PBRM1-205ENST00000409057 PANK2Q9BZ23 570 aa12.44□□□□□ -0.42
PBRM1-205ENST00000409057 RAI14Q9P0K7 980 aa12.44□□□□□ -0.42
PBRM1-205ENST00000409057 BMS1Q14692 1282 aaKnown RBP12.43□□□□□ -0.42
PBRM1-205ENST00000409057 TFIP11Q9UBB9 837 aaKnown RBP12.43□□□□□ -0.42
PBRM1-205ENST00000409057 AKAP2Q9Y2D5 859 aa12.43□□□□□ -0.42
PBRM1-205ENST00000409057 FAM83GA6ND36 823 aa12.43□□□□□ -0.42
PBRM1-205ENST00000409057 POLR3GO15318 223 aaPredicted RBP12.43□□□□□ -0.42
PBRM1-205ENST00000409057 ATP2B2Q01814 1243 aa12.43□□□□□ -0.42
PBRM1-205ENST00000409057 STARD3NLO95772 234 aa12.43□□□□□ -0.42
PBRM1-205ENST00000409057 IFIT1P09914 478 aaKnown RBP12.43□□□□□ -0.42
PBRM1-205ENST00000409057 SPA17Q15506 151 aa12.43□□□□□ -0.42
PBRM1-205ENST00000409057 SEPT7Q16181 437 aaKnown RBP12.43□□□□□ -0.42
PBRM1-205ENST00000409057 ECHDC1Q9NTX5 307 aa12.43□□□□□ -0.42
PBRM1-205ENST00000409057 GOLGA6L9A6NEM1 432 aa12.43□□□□□ -0.42
PBRM1-205ENST00000409057 ARHGAP45Q92619 1136 aa12.43□□□□□ -0.42
PBRM1-205ENST00000409057 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.43□□□□□ -0.423e-10■■■■■ 153.8
PBRM1-205ENST00000409057 ZNF608Q9ULD9 1512 aaPredicted RBP12.43□□□□□ -0.42
PBRM1-205ENST00000409057 ZRSR2Q15696 482 aaKnown RBP12.42□□□□□ -0.42
PBRM1-205ENST00000409057 TMX3Q96JJ7 454 aa12.42□□□□□ -0.42
PBRM1-205ENST00000409057 SPINK5Q9NQ38 1064 aaPredicted RBP12.42□□□□□ -0.42
PBRM1-205ENST00000409057 ZKSCAN5Q9Y2L8 839 aa12.42□□□□□ -0.42
PBRM1-205ENST00000409057 PARD3Q8TEW0 1356 aa12.42□□□□□ -0.42
PBRM1-205ENST00000409057 POTEB2H3BUK9 544 aa12.42□□□□□ -0.42
PBRM1-205ENST00000409057 SNW1Q13573 536 aaKnown RBP12.42□□□□□ -0.42
PBRM1-205ENST00000409057 FANCAO15360 1455 aa12.42□□□□□ -0.42
PBRM1-205ENST00000409057 CCDC196A0A1B0GTZ2 297 aa12.42□□□□□ -0.42
PBRM1-205ENST00000409057 FOXO3O43524 673 aa12.42□□□□□ -0.42
PBRM1-205ENST00000409057 IGHMBP2P38935 993 aaKnown RBP12.42□□□□□ -0.42
PBRM1-205ENST00000409057 NOLC1Q14978 699 aaKnown RBP eCLIP12.42□□□□□ -0.42
PBRM1-205ENST00000409057 HYPKQ9NX55 129 aa12.42□□□□□ -0.42
PBRM1-205ENST00000409057 ENOX2Q16206 610 aaKnown RBP12.42□□□□□ -0.42
PBRM1-205ENST00000409057 KLHL10Q6JEL2 608 aa12.42□□□□□ -0.42
PBRM1-205ENST00000409057 EVI5LQ96CN4 794 aa12.42□□□□□ -0.42
PBRM1-205ENST00000409057 UGGT2Q9NYU1 1516 aa12.42□□□□□ -0.42
PBRM1-205ENST00000409057 ABCF2Q9UG63 623 aa12.42□□□□□ -0.42
PBRM1-205ENST00000409057 ZHX1Q9UKY1 873 aaPredicted RBP12.42□□□□□ -0.42
PBRM1-205ENST00000409057 HS1BP3Q53T59 392 aa12.41□□□□□ -0.42
PBRM1-205ENST00000409057 FAM107BQ9H098 131 aa12.41□□□□□ -0.42
PBRM1-205ENST00000409057 CEP135Q66GS9 1140 aa12.41□□□□□ -0.42
PBRM1-205ENST00000409057 TMC6Q7Z403 805 aa12.41□□□□□ -0.42
PBRM1-205ENST00000409057 SSBP05455 408 aaKnown RBP eCLIP12.41□□□□□ -0.42
PBRM1-205ENST00000409057 GUCY1B3Q02153 619 aa12.41□□□□□ -0.42
PBRM1-205ENST00000409057 GTF2F1P35269 517 aaKnown RBP eCLIP12.41□□□□□ -0.42
PBRM1-205ENST00000409057 SPDYE4A6NLX3 237 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms