RNA–Protein interactions for RNA: ENST00000404583.5

CDPF1-203, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CDPF1, Length 1,439 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-203ENST00000404583 MTFR1LQ9H019 292 aa19.08■□□□□ 0.65
CDPF1-203ENST00000404583 CCDC87Q9NVE4 849 aa19.08■□□□□ 0.65
CDPF1-203ENST00000404583 USP16Q9Y5T5 823 aa19.08■□□□□ 0.65
CDPF1-203ENST00000404583 STARD3NLO95772 234 aa19.08■□□□□ 0.64
CDPF1-203ENST00000404583 SNRPA1P09661 255 aaKnown RBP19.08■□□□□ 0.64
CDPF1-203ENST00000404583 EIF4A1P60842 406 aaKnown RBP19.08■□□□□ 0.64
CDPF1-203ENST00000404583 TRAPPC3LQ5T215 181 aa19.08■□□□□ 0.64
CDPF1-203ENST00000404583 SLC16A10Q8TF71 515 aa19.08■□□□□ 0.64
CDPF1-203ENST00000404583 SALL2Q9Y467 1007 aaPredicted RBP19.08■□□□□ 0.64
CDPF1-203ENST00000404583 BABAM1Q9NWV8 329 aa19.07■□□□□ 0.64
CDPF1-203ENST00000404583 ZBTB1Q9Y2K1 713 aa19.07■□□□□ 0.64
CDPF1-203ENST00000404583 CHL1O00533 1208 aa19.06■□□□□ 0.64
CDPF1-203ENST00000404583 PTGER2P43116 358 aa19.06■□□□□ 0.64
CDPF1-203ENST00000404583 ARHGEF1Q92888 912 aaKnown RBP19.06■□□□□ 0.64
CDPF1-203ENST00000404583 A1BGP04217 495 aa19.05■□□□□ 0.64
CDPF1-203ENST00000404583 CANXP27824 592 aaKnown RBP19.05■□□□□ 0.64
CDPF1-203ENST00000404583 GIGYF1O75420 1035 aaPredicted RBP19.04■□□□□ 0.64
CDPF1-203ENST00000404583 CCDC27Q2M243 656 aa19.04■□□□□ 0.64
CDPF1-203ENST00000404583 WWC1Q8IX03 1113 aa19.04■□□□□ 0.64
CDPF1-203ENST00000404583 CFAP44Q96MT7 982 aa19.04■□□□□ 0.64
CDPF1-203ENST00000404583 UTRNP46939 3433 aa19.03■□□□□ 0.64
CDPF1-203ENST00000404583 ADRA2BP18089 450 aa19.03■□□□□ 0.64
CDPF1-203ENST00000404583 MSL1Q68DK7 614 aa19.03■□□□□ 0.64
CDPF1-203ENST00000404583 SOS1Q07889 1333 aaPredicted RBP19.03■□□□□ 0.64
CDPF1-203ENST00000404583 C4AP0C0L4 1744 aa19.03■□□□□ 0.64
CDPF1-203ENST00000404583 ZNF853P0CG23 659 aa19.02■□□□□ 0.64
CDPF1-203ENST00000404583 RFC4P35249 363 aa19.02■□□□□ 0.64
CDPF1-203ENST00000404583 CALD1Q05682 793 aaKnown RBP19.02■□□□□ 0.64
CDPF1-203ENST00000404583 NCBP3Q53F19 620 aaKnown RBP19.02■□□□□ 0.64
CDPF1-203ENST00000404583 SGIP1Q9BQI5 828 aa19.02■□□□□ 0.64
CDPF1-203ENST00000404583 PIP4K2AP48426 406 aaPredicted RBP19.01■□□□□ 0.63
CDPF1-203ENST00000404583 COL24A1Q17RW2 1714 aa19.01■□□□□ 0.63
CDPF1-203ENST00000404583 MBIPQ9NS73 344 aa19.01■□□□□ 0.63
CDPF1-203ENST00000404583 IFT57Q9NWB7 429 aa19.01■□□□□ 0.63
CDPF1-203ENST00000404583 LAMB4A4D0S4 1761 aa19■□□□□ 0.63
CDPF1-203ENST00000404583 GNAI1P63096 354 aa19■□□□□ 0.63
CDPF1-203ENST00000404583 KRT24Q2M2I5 525 aa19■□□□□ 0.63
CDPF1-203ENST00000404583 EIF5P55010 431 aaKnown RBP19■□□□□ 0.63
CDPF1-203ENST00000404583 SRP68Q9UHB9 627 aaKnown RBP19■□□□□ 0.63
CDPF1-203ENST00000404583 ZNF330Q9Y3S2 320 aaPredicted RBP19■□□□□ 0.63
CDPF1-203ENST00000404583 COL15A1P39059 1388 aa18.99■□□□□ 0.63
CDPF1-203ENST00000404583 GYS1P13807 737 aa18.98■□□□□ 0.63
CDPF1-203ENST00000404583 POLD1P28340 1107 aa18.98■□□□□ 0.63
CDPF1-203ENST00000404583 IL6STP40189 918 aaPredicted RBP18.98■□□□□ 0.63
CDPF1-203ENST00000404583 FHDC1Q9C0D6 1143 aaPredicted RBP18.98■□□□□ 0.63
CDPF1-203ENST00000404583 NBPF26B4DH59 902 aa18.97■□□□□ 0.63
CDPF1-203ENST00000404583 EIF2S2P20042 333 aaKnown RBP18.97■□□□□ 0.63
CDPF1-203ENST00000404583 YY1P25490 414 aa18.97■□□□□ 0.63
CDPF1-203ENST00000404583 NBPF10Q6P3W6 841 aaKnown RBP18.97■□□□□ 0.63
CDPF1-203ENST00000404583 NBPF15Q8N660 670 aa18.97■□□□□ 0.63
CDPF1-203ENST00000404583 USP42Q9H9J4 1324 aaKnown RBP18.97■□□□□ 0.63
CDPF1-203ENST00000404583 ZPR1O75312 459 aa18.96■□□□□ 0.63
CDPF1-203ENST00000404583 USPL1Q5W0Q7 1092 aa18.96■□□□□ 0.63
CDPF1-203ENST00000404583 NGEFQ8N5V2 710 aa18.96■□□□□ 0.63
CDPF1-203ENST00000404583 ARXQ96QS3 562 aa18.96■□□□□ 0.63
CDPF1-203ENST00000404583 NPM2Q86SE8 214 aaKnown RBP18.95■□□□□ 0.62
CDPF1-203ENST00000404583 WDR63Q8IWG1 891 aa18.95■□□□□ 0.62
CDPF1-203ENST00000404583 TSR2Q969E8 191 aaKnown RBP18.95■□□□□ 0.62
CDPF1-203ENST00000404583 SYT17Q9BSW7 474 aa18.95■□□□□ 0.62
CDPF1-203ENST00000404583 NARFQ9UHQ1 456 aa18.95■□□□□ 0.62
CDPF1-203ENST00000404583 TBC1D2BQ9UPU7 963 aa18.95■□□□□ 0.62
CDPF1-203ENST00000404583 A0A087WZG4 1122 aa18.94■□□□□ 0.62
CDPF1-203ENST00000404583 NLGN1Q8N2Q7 840 aa18.94■□□□□ 0.62
CDPF1-203ENST00000404583 NECTIN2Q92692 538 aa18.94■□□□□ 0.62
CDPF1-203ENST00000404583 IL16Q14005 1332 aa18.94■□□□□ 0.62
CDPF1-203ENST00000404583 DCAF8L1A6NGE4 600 aa18.93■□□□□ 0.62
CDPF1-203ENST00000404583 FKBP8Q14318 412 aa18.93■□□□□ 0.62
CDPF1-203ENST00000404583 DUSP27Q5VZP5 1158 aa18.93■□□□□ 0.62
CDPF1-203ENST00000404583 ELL2O00472 640 aaPredicted RBP18.92■□□□□ 0.62
CDPF1-203ENST00000404583 MYL6BP14649 208 aa18.92■□□□□ 0.62
CDPF1-203ENST00000404583 BCL2L12Q9HB09 334 aa18.92■□□□□ 0.62
CDPF1-203ENST00000404583 SPINK5Q9NQ38 1064 aaPredicted RBP18.92■□□□□ 0.62
CDPF1-203ENST00000404583 MMP10P09238 476 aa18.91■□□□□ 0.62
CDPF1-203ENST00000404583 DZIP3Q86Y13 1208 aaKnown RBP18.91■□□□□ 0.62
CDPF1-203ENST00000404583 KLHL34Q8N239 644 aa18.91■□□□□ 0.62
CDPF1-203ENST00000404583 C8orf58Q8NAV2 365 aa18.91■□□□□ 0.62
CDPF1-203ENST00000404583 ANXA1P04083 346 aa18.91■□□□□ 0.62
CDPF1-203ENST00000404583 HOXB7P09629 217 aa18.91■□□□□ 0.62
CDPF1-203ENST00000404583 PDIA6Q15084 440 aa18.91■□□□□ 0.62
CDPF1-203ENST00000404583 ERBB4Q15303 1308 aa18.9■□□□□ 0.62
CDPF1-203ENST00000404583 ZNF521Q96K83 1311 aa18.9■□□□□ 0.62
CDPF1-203ENST00000404583 HDGFL1Q5TGJ6 251 aa18.9■□□□□ 0.62
CDPF1-203ENST00000404583 TSPYL6Q8N831 410 aa18.9■□□□□ 0.62
CDPF1-203ENST00000404583 GOLGB1Q14789 3259 aaKnown RBP18.89■□□□□ 0.61
CDPF1-203ENST00000404583 CAMTA2O94983 1202 aa18.89■□□□□ 0.61
CDPF1-203ENST00000404583 PROSER3Q2NL68 480 aa18.89■□□□□ 0.61
CDPF1-203ENST00000404583 FANCIQ9NVI1 1328 aa18.88■□□□□ 0.61
CDPF1-203ENST00000404583 SCN7AQ01118 1682 aa18.88■□□□□ 0.61
CDPF1-203ENST00000404583 TM4SF1P30408 202 aa18.88■□□□□ 0.61
CDPF1-203ENST00000404583 BCORQ6W2J9 1755 aa18.88■□□□□ 0.61
CDPF1-203ENST00000404583 TTLL7Q6ZT98 887 aa18.87■□□□□ 0.61
CDPF1-203ENST00000404583 LRP10Q7Z4F1 713 aa18.87■□□□□ 0.61
CDPF1-203ENST00000404583 CHPF2Q9P2E5 772 aa18.87■□□□□ 0.61
CDPF1-203ENST00000404583 PARP3Q9Y6F1 533 aa18.87■□□□□ 0.61
CDPF1-203ENST00000404583 DDR1Q08345 913 aa18.86■□□□□ 0.61
CDPF1-203ENST00000404583 NFIXQ14938 502 aa18.86■□□□□ 0.61
CDPF1-203ENST00000404583 TBC1D9BQ66K14 1250 aa18.86■□□□□ 0.61
CDPF1-203ENST00000404583 BICDL1Q6ZP65 573 aa18.86■□□□□ 0.61
CDPF1-203ENST00000404583 DDX21Q9NR30 783 aaKnown RBP eCLIP18.86■□□□□ 0.61
CDPF1-203ENST00000404583 GOLGA2Q08379 1002 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms