RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 PRICKLE2Q7Z3G6 844 aa8.95□□□□□ -0.98
HMGB3P19-201ENST00000403971 C2orf49Q9BVC5 232 aaPredicted RBP8.95□□□□□ -0.98
HMGB3P19-201ENST00000403971 PHKA2P46019 1235 aa8.94□□□□□ -0.98
HMGB3P19-201ENST00000403971 C4orf17Q53FE4 359 aa8.94□□□□□ -0.98
HMGB3P19-201ENST00000403971 NBPF15Q8N660 670 aa8.94□□□□□ -0.98
HMGB3P19-201ENST00000403971 RHBDD1Q8TEB9 315 aa8.94□□□□□ -0.98
HMGB3P19-201ENST00000403971 GZF1Q9H116 711 aaPredicted RBP8.94□□□□□ -0.98
HMGB3P19-201ENST00000403971 ATP13A2Q9NQ11 1180 aa8.94□□□□□ -0.98
HMGB3P19-201ENST00000403971 ZNF232Q9UNY5 417 aa8.94□□□□□ -0.98
HMGB3P19-201ENST00000403971 GNEQ9Y223 722 aaKnown RBP8.94□□□□□ -0.98
HMGB3P19-201ENST00000403971 TTLL8A6PVC2 850 aa8.93□□□□□ -0.98
HMGB3P19-201ENST00000403971 EML1O00423 815 aa8.93□□□□□ -0.98
HMGB3P19-201ENST00000403971 RHOQP17081 205 aa8.93□□□□□ -0.98
HMGB3P19-201ENST00000403971 NOS2P35228 1153 aa8.93□□□□□ -0.98
HMGB3P19-201ENST00000403971 PLA2G4AP47712 749 aa8.93□□□□□ -0.98
HMGB3P19-201ENST00000403971 POU4F2Q12837 409 aa8.93□□□□□ -0.98
HMGB3P19-201ENST00000403971 L3MBTL2Q969R5 705 aa8.93□□□□□ -0.98
HMGB3P19-201ENST00000403971 SOS2Q07890 1332 aaPredicted RBP8.93□□□□□ -0.98
HMGB3P19-201ENST00000403971 SERTM1A2A2V5 107 aa8.92□□□□□ -0.98
HMGB3P19-201ENST00000403971 GTF2E1P29083 439 aaPredicted RBP8.92□□□□□ -0.98
HMGB3P19-201ENST00000403971 TEAD4Q15561 434 aa8.92□□□□□ -0.98
HMGB3P19-201ENST00000403971 GNASQ5JWF2 1037 aa8.92□□□□□ -0.98
HMGB3P19-201ENST00000403971 CCER1Q8TC90 406 aaPredicted RBP8.92□□□□□ -0.98
HMGB3P19-201ENST00000403971 VTI1AQ96AJ9 217 aa8.92□□□□□ -0.98
HMGB3P19-201ENST00000403971 NGLY1Q96IV0 654 aa8.92□□□□□ -0.98
HMGB3P19-201ENST00000403971 NIFKQ9BYG3 293 aaKnown RBP8.92□□□□□ -0.98
HMGB3P19-201ENST00000403971 ANO2Q9NQ90 1003 aa8.92□□□□□ -0.98
HMGB3P19-201ENST00000403971 PODXL2Q9NZ53 605 aa8.92□□□□□ -0.98
HMGB3P19-201ENST00000403971 HCN4Q9Y3Q4 1203 aa8.92□□□□□ -0.98
HMGB3P19-201ENST00000403971 SOBPA7XYQ1 873 aa8.91□□□□□ -0.98
HMGB3P19-201ENST00000403971 PATL2C9JE40 543 aaKnown RBP8.91□□□□□ -0.98
HMGB3P19-201ENST00000403971 ABL1P00519 1130 aa8.91□□□□□ -0.98
HMGB3P19-201ENST00000403971 ZNF211Q13398 564 aaPredicted RBP8.91□□□□□ -0.98
HMGB3P19-201ENST00000403971 MTMR3Q13615 1198 aa8.91□□□□□ -0.98
HMGB3P19-201ENST00000403971 LYSMD3Q7Z3D4 306 aa8.91□□□□□ -0.98
HMGB3P19-201ENST00000403971 STAG2Q8N3U4 1231 aa8.91□□□□□ -0.98
HMGB3P19-201ENST00000403971 SAP130Q9H0E3 1048 aa8.91□□□□□ -0.98
HMGB3P19-201ENST00000403971 DNMT3LQ9UJW3 386 aa8.91□□□□□ -0.98
HMGB3P19-201ENST00000403971 SPATA31C2B4DYI2 1134 aa8.9□□□□□ -0.98
HMGB3P19-201ENST00000403971 TXLNAP40222 546 aa8.9□□□□□ -0.98
HMGB3P19-201ENST00000403971 NBPF10Q6P3W6 841 aaKnown RBP8.9□□□□□ -0.98
HMGB3P19-201ENST00000403971 POTEAQ6S8J7 498 aa8.9□□□□□ -0.98
HMGB3P19-201ENST00000403971 GTF3C2Q8WUA4 911 aaPredicted RBP8.9□□□□□ -0.98
HMGB3P19-201ENST00000403971 CHMP3Q9Y3E7 222 aa8.9□□□□□ -0.98
HMGB3P19-201ENST00000403971 PTCD1O75127 700 aaKnown RBP8.89□□□□□ -0.99
HMGB3P19-201ENST00000403971 COL26A1Q96A83 441 aa8.89□□□□□ -0.99
HMGB3P19-201ENST00000403971 QTRT2Q9H974 415 aaKnown RBP8.89□□□□□ -0.99
HMGB3P19-201ENST00000403971 DNMT3AQ9Y6K1 912 aaPredicted RBP8.89□□□□□ -0.99
HMGB3P19-201ENST00000403971 LCE2BO14633 110 aa8.88□□□□□ -0.99
HMGB3P19-201ENST00000403971 ALDH16A1Q8IZ83 802 aa8.88□□□□□ -0.99
HMGB3P19-201ENST00000403971 AIDAQ96BJ3 306 aa8.88□□□□□ -0.99
HMGB3P19-201ENST00000403971 PHACTR1Q9C0D0 580 aa8.88□□□□□ -0.99
HMGB3P19-201ENST00000403971 MTMR7Q9Y216 660 aa8.88□□□□□ -0.99
HMGB3P19-201ENST00000403971 HIRAP54198 1017 aaPredicted RBP8.87□□□□□ -0.99
HMGB3P19-201ENST00000403971 COX20Q5RI15 118 aa8.87□□□□□ -0.99
HMGB3P19-201ENST00000403971 Q6ZNB5 142 aa8.87□□□□□ -0.99
HMGB3P19-201ENST00000403971 KLRG1Q96E93 195 aa8.87□□□□□ -0.99
HMGB3P19-201ENST00000403971 LRFN2Q9ULH4 789 aa8.87□□□□□ -0.99
HMGB3P19-201ENST00000403971 SOWAHDA6NJG2 315 aa8.86□□□□□ -0.99
HMGB3P19-201ENST00000403971 C16orf46Q6P387 395 aa8.86□□□□□ -0.99
HMGB3P19-201ENST00000403971 H3BRB1 525 aa8.85□□□□□ -0.99
HMGB3P19-201ENST00000403971 MAN1A2O60476 641 aa8.85□□□□□ -0.99
HMGB3P19-201ENST00000403971 TUT1Q9H6E5 874 aaKnown RBP8.85□□□□□ -0.99
HMGB3P19-201ENST00000403971 TIMMDC1Q9NPL8 285 aa8.85□□□□□ -0.99
HMGB3P19-201ENST00000403971 GMPR2Q9P2T1 348 aaKnown RBP8.85□□□□□ -0.99
HMGB3P19-201ENST00000403971 TNFRSF10BO14763 440 aa8.84□□□□□ -0.99
HMGB3P19-201ENST00000403971 FAM26DQ5JW98 314 aa8.84□□□□□ -0.99
HMGB3P19-201ENST00000403971 SND1Q7KZF4 910 aaKnown RBP eCLIP8.84□□□□□ -0.99
HMGB3P19-201ENST00000403971 HELQQ8TDG4 1101 aa8.84□□□□□ -0.99
HMGB3P19-201ENST00000403971 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.84□□□□□ -0.99
HMGB3P19-201ENST00000403971 KLK14Q9P0G3 267 aa8.84□□□□□ -0.99
HMGB3P19-201ENST00000403971 ICMTO60725 284 aa8.83□□□□□ -1
HMGB3P19-201ENST00000403971 ATP4AP20648 1035 aa8.83□□□□□ -1
HMGB3P19-201ENST00000403971 DGKZQ13574 1117 aa8.83□□□□□ -1
HMGB3P19-201ENST00000403971 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.83□□□□□ -1
HMGB3P19-201ENST00000403971 NBPF1Q3BBV0 1214 aa8.83□□□□□ -1
HMGB3P19-201ENST00000403971 MYO19Q96H55 970 aa8.83□□□□□ -1
HMGB3P19-201ENST00000403971 EGFL7Q9UHF1 273 aa8.83□□□□□ -1
HMGB3P19-201ENST00000403971 SENP3-EIF4A1A0A087X0R7 540 aa8.82□□□□□ -1
HMGB3P19-201ENST00000403971 MSX1P28360 303 aa8.82□□□□□ -1
HMGB3P19-201ENST00000403971 FKBP4Q02790 459 aaKnown RBP eCLIP8.82□□□□□ -1
HMGB3P19-201ENST00000403971 RTN1Q16799 776 aa8.82□□□□□ -1
HMGB3P19-201ENST00000403971 WDR44Q5JSH3 913 aa8.82□□□□□ -1
HMGB3P19-201ENST00000403971 TMCO4Q5TGY1 634 aa8.82□□□□□ -1
HMGB3P19-201ENST00000403971 C1orf53Q5VUE5 145 aa8.82□□□□□ -1
HMGB3P19-201ENST00000403971 GLYCTKQ8IVS8 523 aa8.82□□□□□ -1
HMGB3P19-201ENST00000403971 RHPN1Q8TCX5 695 aa8.82□□□□□ -1
HMGB3P19-201ENST00000403971 C7orf43Q8WVR3 580 aa8.82□□□□□ -1
HMGB3P19-201ENST00000403971 GPAMQ9HCL2 828 aa8.82□□□□□ -1
HMGB3P19-201ENST00000403971 ZDHHC3Q9NYG2 299 aa8.82□□□□□ -1
HMGB3P19-201ENST00000403971 SNRPBP14678 240 aaKnown RBP8.81□□□□□ -1
HMGB3P19-201ENST00000403971 MPSTP25325 297 aa8.81□□□□□ -1
HMGB3P19-201ENST00000403971 ECM1Q16610 540 aa8.81□□□□□ -1
HMGB3P19-201ENST00000403971 TRIM47Q96LD4 638 aa8.81□□□□□ -1
HMGB3P19-201ENST00000403971 BIN2Q9UBW5 565 aaPredicted RBP8.81□□□□□ -1
HMGB3P19-201ENST00000403971 A0A1B0GTH6 734 aa8.8□□□□□ -1
HMGB3P19-201ENST00000403971 TATP17735 454 aaPredicted RBP8.8□□□□□ -1
HMGB3P19-201ENST00000403971 HSH2DQ96JZ2 352 aa8.8□□□□□ -1
HMGB3P19-201ENST00000403971 GAS2L1Q99501 681 aaPredicted RBP8.8□□□□□ -1
HMGB3P19-201ENST00000403971 RUBCNLQ9H714 662 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms