RNA–Protein interactions for RNA: ENST00000397411.6

TSPAN4-207, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,025 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-207ENST00000397411 POLD1P28340 1107 aa33.17■■■□□ 2.9
TSPAN4-207ENST00000397411 RFC4P35249 363 aa33.17■■■□□ 2.9
TSPAN4-207ENST00000397411 SENP3-EIF4A1A0A087X0R7 540 aa33.16■■■□□ 2.9
TSPAN4-207ENST00000397411 CANXP27824 592 aaKnown RBP33.15■■■□□ 2.9
TSPAN4-207ENST00000397411 MSL1Q68DK7 614 aa33.15■■■□□ 2.9
TSPAN4-207ENST00000397411 ARHGEF1Q92888 912 aaKnown RBP33.15■■■□□ 2.9
TSPAN4-207ENST00000397411 CICQ96RK0 1608 aaPredicted RBP33.15■■■□□ 2.9
TSPAN4-207ENST00000397411 BABAM1Q9NWV8 329 aa33.15■■■□□ 2.9
TSPAN4-207ENST00000397411 CALD1Q05682 793 aaKnown RBP33.14■■■□□ 2.9
TSPAN4-207ENST00000397411 NPM2Q86SE8 214 aaKnown RBP33.13■■■□□ 2.89
TSPAN4-207ENST00000397411 USP16Q9Y5T5 823 aa33.12■■■□□ 2.89
TSPAN4-207ENST00000397411 CCER2I3L3R5 266 aa33.11■■■□□ 2.89
TSPAN4-207ENST00000397411 PTGER2P43116 358 aa33.11■■■□□ 2.89
TSPAN4-207ENST00000397411 EIF4A1P60842 406 aaKnown RBP33.11■■■□□ 2.89
TSPAN4-207ENST00000397411 ZBTB1Q9Y2K1 713 aa33.11■■■□□ 2.89
TSPAN4-207ENST00000397411 KDM3BQ7LBC6 1761 aa33.1■■■□□ 2.89
TSPAN4-207ENST00000397411 PRAMEF22A3QJZ6 481 aa33.09■■■□□ 2.89
TSPAN4-207ENST00000397411 A1BGP04217 495 aa33.09■■■□□ 2.89
TSPAN4-207ENST00000397411 ZNF330Q9Y3S2 320 aaPredicted RBP33.09■■■□□ 2.89
TSPAN4-207ENST00000397411 SALL2Q9Y467 1007 aaPredicted RBP33.09■■■□□ 2.89
TSPAN4-207ENST00000397411 ARXQ96QS3 562 aa33.08■■■□□ 2.89
TSPAN4-207ENST00000397411 SOS1Q07889 1333 aaPredicted RBP33.07■■■□□ 2.88
TSPAN4-207ENST00000397411 ZPR1O75312 459 aa33.07■■■□□ 2.88
TSPAN4-207ENST00000397411 CHL1O00533 1208 aa33.06■■■□□ 2.88
TSPAN4-207ENST00000397411 A0A087WZG4 1122 aa33.05■■■□□ 2.88
TSPAN4-207ENST00000397411 GIGYF1O75420 1035 aaPredicted RBP33.05■■■□□ 2.88
TSPAN4-207ENST00000397411 CFAP44Q96MT7 982 aa33.05■■■□□ 2.88
TSPAN4-207ENST00000397411 SGIP1Q9BQI5 828 aa33.05■■■□□ 2.88
TSPAN4-207ENST00000397411 GNAI1P63096 354 aa33.04■■■□□ 2.88
TSPAN4-207ENST00000397411 NLGN1Q8N2Q7 840 aa33.04■■■□□ 2.88
TSPAN4-207ENST00000397411 IL6STP40189 918 aaPredicted RBP33.02■■■□□ 2.88
TSPAN4-207ENST00000397411 CCDC27Q2M243 656 aa33.02■■■□□ 2.88
TSPAN4-207ENST00000397411 MIER1Q8N108 512 aa33.02■■■□□ 2.88
TSPAN4-207ENST00000397411 KLHL34Q8N239 644 aa33.02■■■□□ 2.88
TSPAN4-207ENST00000397411 SRP68Q9UHB9 627 aaKnown RBP33.02■■■□□ 2.88
TSPAN4-207ENST00000397411 COL15A1P39059 1388 aa33.01■■■□□ 2.88
TSPAN4-207ENST00000397411 IFT57Q9NWB7 429 aa33.01■■■□□ 2.87
TSPAN4-207ENST00000397411 EIF5P55010 431 aaKnown RBP33■■■□□ 2.87
TSPAN4-207ENST00000397411 NCBP3Q53F19 620 aaKnown RBP33■■■□□ 2.87
TSPAN4-207ENST00000397411 WWC1Q8IX03 1113 aa33■■■□□ 2.87
TSPAN4-207ENST00000397411 GYS1P13807 737 aa32.99■■■□□ 2.87
TSPAN4-207ENST00000397411 PIP4K2AP48426 406 aaPredicted RBP32.99■■■□□ 2.87
TSPAN4-207ENST00000397411 USP42Q9H9J4 1324 aaKnown RBP32.99■■■□□ 2.87
TSPAN4-207ENST00000397411 EIF2S2P20042 333 aaKnown RBP32.98■■■□□ 2.87
TSPAN4-207ENST00000397411 USPL1Q5W0Q7 1092 aa32.98■■■□□ 2.87
TSPAN4-207ENST00000397411 NARFQ9UHQ1 456 aa32.98■■■□□ 2.87
TSPAN4-207ENST00000397411 MBIPQ9NS73 344 aa32.97■■■□□ 2.87
TSPAN4-207ENST00000397411 C4AP0C0L4 1744 aa32.96■■■□□ 2.87
TSPAN4-207ENST00000397411 COL24A1Q17RW2 1714 aa32.95■■■□□ 2.87
TSPAN4-207ENST00000397411 ZNF853P0CG23 659 aa32.95■■■□□ 2.87
TSPAN4-207ENST00000397411 NGEFQ8N5V2 710 aa32.95■■■□□ 2.87
TSPAN4-207ENST00000397411 TBC1D2BQ9UPU7 963 aa32.95■■■□□ 2.87
TSPAN4-207ENST00000397411 MMP10P09238 476 aa32.94■■■□□ 2.86
TSPAN4-207ENST00000397411 FHDC1Q9C0D6 1143 aaPredicted RBP32.94■■■□□ 2.86
TSPAN4-207ENST00000397411 LAMB4A4D0S4 1761 aa32.93■■■□□ 2.86
TSPAN4-207ENST00000397411 NBPF26B4DH59 902 aa32.92■■■□□ 2.86
TSPAN4-207ENST00000397411 FKBP8Q14318 412 aa32.92■■■□□ 2.86
TSPAN4-207ENST00000397411 NBPF10Q6P3W6 841 aaKnown RBP32.92■■■□□ 2.86
TSPAN4-207ENST00000397411 NBPF15Q8N660 670 aa32.92■■■□□ 2.86
TSPAN4-207ENST00000397411 PARP3Q9Y6F1 533 aa32.92■■■□□ 2.86
TSPAN4-207ENST00000397411 KRT24Q2M2I5 525 aa32.91■■■□□ 2.86
TSPAN4-207ENST00000397411 DZIP3Q86Y13 1208 aaKnown RBP32.91■■■□□ 2.86
TSPAN4-207ENST00000397411 NECTIN2Q92692 538 aa32.91■■■□□ 2.86
TSPAN4-207ENST00000397411 MYL6BP14649 208 aa32.9■■■□□ 2.86
TSPAN4-207ENST00000397411 WDR63Q8IWG1 891 aa32.9■■■□□ 2.86
TSPAN4-207ENST00000397411 SYT17Q9BSW7 474 aa32.89■■■□□ 2.86
TSPAN4-207ENST00000397411 IL16Q14005 1332 aa32.88■■■□□ 2.85
TSPAN4-207ENST00000397411 ERBB4Q15303 1308 aa32.87■■■□□ 2.85
TSPAN4-207ENST00000397411 DUSP27Q5VZP5 1158 aa32.87■■■□□ 2.85
TSPAN4-207ENST00000397411 ELL2O00472 640 aaPredicted RBP32.86■■■□□ 2.85
TSPAN4-207ENST00000397411 DCAF8L1A6NGE4 600 aa32.85■■■□□ 2.85
TSPAN4-207ENST00000397411 HOXB7P09629 217 aa32.85■■■□□ 2.85
TSPAN4-207ENST00000397411 TSR2Q969E8 191 aaKnown RBP32.85■■■□□ 2.85
TSPAN4-207ENST00000397411 HDGFL1Q5TGJ6 251 aa32.84■■■□□ 2.85
TSPAN4-207ENST00000397411 BICDL1Q6ZP65 573 aa32.84■■■□□ 2.85
TSPAN4-207ENST00000397411 BCL2L12Q9HB09 334 aa32.83■■■□□ 2.85
TSPAN4-207ENST00000397411 CAMTA2O94983 1202 aa32.82■■■□□ 2.84
TSPAN4-207ENST00000397411 TM4SF1P30408 202 aa32.82■■■□□ 2.84
TSPAN4-207ENST00000397411 KIF6Q6ZMV9 814 aa32.82■■■□□ 2.84
TSPAN4-207ENST00000397411 ZNF652Q9Y2D9 606 aa32.82■■■□□ 2.84
TSPAN4-207ENST00000397411 CD2APQ9Y5K6 639 aa32.82■■■□□ 2.84
TSPAN4-207ENST00000397411 SRCAPQ6ZRS2 3230 aa32.81■■■□□ 2.84
TSPAN4-207ENST00000397411 NFIXQ14938 502 aa32.81■■■□□ 2.84
TSPAN4-207ENST00000397411 C8orf58Q8NAV2 365 aa32.8■■■□□ 2.84
TSPAN4-207ENST00000397411 CHMP4AQ9BY43 222 aa32.8■■■□□ 2.84
TSPAN4-207ENST00000397411 ANXA1P04083 346 aa32.78■■■□□ 2.84
TSPAN4-207ENST00000397411 DDR1Q08345 913 aa32.78■■■□□ 2.84
TSPAN4-207ENST00000397411 DDX21Q9NR30 783 aaKnown RBP eCLIP32.78■■■□□ 2.84
TSPAN4-207ENST00000397411 GOLGA2Q08379 1002 aa32.77■■■□□ 2.84
TSPAN4-207ENST00000397411 TBC1D9BQ66K14 1250 aa32.77■■■□□ 2.84
TSPAN4-207ENST00000397411 CLEC4GQ6UXB4 293 aa32.77■■■□□ 2.84
TSPAN4-207ENST00000397411 SETDB2Q96T68 719 aa32.77■■■□□ 2.84
TSPAN4-207ENST00000397411 MYH16Q9H6N6 1097 aa32.77■■■□□ 2.84
TSPAN4-207ENST00000397411 POLRMTO00411 1230 aaKnown RBP32.76■■■□□ 2.83
TSPAN4-207ENST00000397411 PDIA6Q15084 440 aa32.76■■■□□ 2.83
TSPAN4-207ENST00000397411 CHPF2Q9P2E5 772 aa32.76■■■□□ 2.83
TSPAN4-207ENST00000397411 DBF4Q9UBU7 674 aaPredicted RBP32.76■■■□□ 2.83
TSPAN4-207ENST00000397411 SERPINB2P05120 415 aa32.75■■■□□ 2.83
TSPAN4-207ENST00000397411 AIMP1Q12904 312 aaKnown RBP32.75■■■□□ 2.83
TSPAN4-207ENST00000397411 PROSER3Q2NL68 480 aa32.75■■■□□ 2.83
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms