RNA–Protein interactions for RNA: ENST00000395789.5

C6orf48-209, Transcript of chromosome 6 open reading frame 48, humanhuman

APPRIS P1 TSL 3 BASIC

Gene C6orf48, Length 952 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C6orf48-209ENST00000395789 USP16Q9Y5T5 823 aa17.5■□□□□ 0.39
C6orf48-209ENST00000395789 SOS1Q07889 1333 aaPredicted RBP17.49■□□□□ 0.39
C6orf48-209ENST00000395789 CHL1O00533 1208 aa17.49■□□□□ 0.39
C6orf48-209ENST00000395789 ADRA2BP18089 450 aa17.49■□□□□ 0.39
C6orf48-209ENST00000395789 ARHGEF1Q92888 912 aaKnown RBP17.49■□□□□ 0.39
C6orf48-209ENST00000395789 TEX13AQ9BXU3 409 aaPredicted RBP17.49■□□□□ 0.39
C6orf48-209ENST00000395789 BABAM1Q9NWV8 329 aa17.49■□□□□ 0.39
C6orf48-209ENST00000395789 SNRPA1P09661 255 aaKnown RBP17.48■□□□□ 0.39
C6orf48-209ENST00000395789 TRAPPC3LQ5T215 181 aa17.48■□□□□ 0.39
C6orf48-209ENST00000395789 DIEXFQ68CQ4 756 aaKnown RBP17.48■□□□□ 0.39
C6orf48-209ENST00000395789 SENP3-EIF4A1A0A087X0R7 540 aa17.47■□□□□ 0.39
C6orf48-209ENST00000395789 MSH5O43196 834 aa17.47■□□□□ 0.39
C6orf48-209ENST00000395789 GIGYF1O75420 1035 aaPredicted RBP17.47■□□□□ 0.39
C6orf48-209ENST00000395789 STARD3NLO95772 234 aa17.47■□□□□ 0.39
C6orf48-209ENST00000395789 A1BGP04217 495 aa17.47■□□□□ 0.39
C6orf48-209ENST00000395789 ZNF853P0CG23 659 aa17.47■□□□□ 0.39
C6orf48-209ENST00000395789 LAMB4A4D0S4 1761 aa17.46■□□□□ 0.39
C6orf48-209ENST00000395789 CCER2I3L3R5 266 aa17.46■□□□□ 0.39
C6orf48-209ENST00000395789 EIF5P55010 431 aaKnown RBP17.46■□□□□ 0.39
C6orf48-209ENST00000395789 CCDC27Q2M243 656 aa17.46■□□□□ 0.39
C6orf48-209ENST00000395789 NCBP3Q53F19 620 aaKnown RBP17.46■□□□□ 0.39
C6orf48-209ENST00000395789 MSL1Q68DK7 614 aa17.46■□□□□ 0.39
C6orf48-209ENST00000395789 FAM9BQ8IZU0 186 aa17.46■□□□□ 0.39
C6orf48-209ENST00000395789 TSPYL4Q9UJ04 414 aa17.46■□□□□ 0.39
C6orf48-209ENST00000395789 NBPF26B4DH59 902 aa17.44■□□□□ 0.38
C6orf48-209ENST00000395789 GYS1P13807 737 aa17.44■□□□□ 0.38
C6orf48-209ENST00000395789 CANXP27824 592 aaKnown RBP17.44■□□□□ 0.38
C6orf48-209ENST00000395789 NBPF10Q6P3W6 841 aaKnown RBP17.44■□□□□ 0.38
C6orf48-209ENST00000395789 WWC1Q8IX03 1113 aa17.44■□□□□ 0.38
C6orf48-209ENST00000395789 NBPF15Q8N660 670 aa17.44■□□□□ 0.38
C6orf48-209ENST00000395789 CFAP44Q96MT7 982 aa17.44■□□□□ 0.38
C6orf48-209ENST00000395789 SRP68Q9UHB9 627 aaKnown RBP17.44■□□□□ 0.38
C6orf48-209ENST00000395789 USP42Q9H9J4 1324 aaKnown RBP17.44■□□□□ 0.38
C6orf48-209ENST00000395789 COL15A1P39059 1388 aa17.43■□□□□ 0.38
C6orf48-209ENST00000395789 MIER1Q8N108 512 aa17.43■□□□□ 0.38
C6orf48-209ENST00000395789 RFC4P35249 363 aa17.42■□□□□ 0.38
C6orf48-209ENST00000395789 IL6STP40189 918 aaPredicted RBP17.42■□□□□ 0.38
C6orf48-209ENST00000395789 PIP4K2AP48426 406 aaPredicted RBP17.42■□□□□ 0.38
C6orf48-209ENST00000395789 KRT24Q2M2I5 525 aa17.42■□□□□ 0.38
C6orf48-209ENST00000395789 ARXQ96QS3 562 aa17.42■□□□□ 0.38
C6orf48-209ENST00000395789 BCL2L12Q9HB09 334 aa17.42■□□□□ 0.38
C6orf48-209ENST00000395789 IFT57Q9NWB7 429 aa17.42■□□□□ 0.38
C6orf48-209ENST00000395789 MBIPQ9NS73 344 aa17.41■□□□□ 0.38
C6orf48-209ENST00000395789 FKBP8Q14318 412 aa17.4■□□□□ 0.38
C6orf48-209ENST00000395789 NARFQ9UHQ1 456 aa17.4■□□□□ 0.38
C6orf48-209ENST00000395789 LAS1LQ9Y4W2 734 aaKnown RBP17.4■□□□□ 0.38
C6orf48-209ENST00000395789 POLD1P28340 1107 aa17.39■□□□□ 0.37
C6orf48-209ENST00000395789 NLGN1Q8N2Q7 840 aa17.39■□□□□ 0.37
C6orf48-209ENST00000395789 PPP1R1BQ9UD71 204 aaPredicted RBP17.39■□□□□ 0.37
C6orf48-209ENST00000395789 GNAI1P63096 354 aa17.38■□□□□ 0.37
C6orf48-209ENST00000395789 CALD1Q05682 793 aaKnown RBP17.38■□□□□ 0.37
C6orf48-209ENST00000395789 USPL1Q5W0Q7 1092 aa17.38■□□□□ 0.37
C6orf48-209ENST00000395789 LRP10Q7Z4F1 713 aa17.38■□□□□ 0.37
C6orf48-209ENST00000395789 FHDC1Q9C0D6 1143 aaPredicted RBP17.38■□□□□ 0.37
C6orf48-209ENST00000395789 SCN7AQ01118 1682 aa17.38■□□□□ 0.37
C6orf48-209ENST00000395789 MMP10P09238 476 aa17.37■□□□□ 0.37
C6orf48-209ENST00000395789 TM4SF1P30408 202 aa17.37■□□□□ 0.37
C6orf48-209ENST00000395789 PDIA6Q15084 440 aa17.37■□□□□ 0.37
C6orf48-209ENST00000395789 SYT17Q9BSW7 474 aa17.37■□□□□ 0.37
C6orf48-209ENST00000395789 BCORQ6W2J9 1755 aa17.36■□□□□ 0.37
C6orf48-209ENST00000395789 A0A087WZG4 1122 aa17.36■□□□□ 0.37
C6orf48-209ENST00000395789 TBC1D2BQ9UPU7 963 aa17.36■□□□□ 0.37
C6orf48-209ENST00000395789 SALL2Q9Y467 1007 aaPredicted RBP17.36■□□□□ 0.37
C6orf48-209ENST00000395789 IL16Q14005 1332 aa17.36■□□□□ 0.37
C6orf48-209ENST00000395789 ZNF521Q96K83 1311 aa17.36■□□□□ 0.37
C6orf48-209ENST00000395789 ZPR1O75312 459 aa17.35■□□□□ 0.37
C6orf48-209ENST00000395789 CAMTA2O94983 1202 aa17.35■□□□□ 0.37
C6orf48-209ENST00000395789 DDR1Q08345 913 aa17.35■□□□□ 0.37
C6orf48-209ENST00000395789 HOXB7P09629 217 aa17.34■□□□□ 0.37
C6orf48-209ENST00000395789 ERBB4Q15303 1308 aa17.34■□□□□ 0.37
C6orf48-209ENST00000395789 PROSER3Q2NL68 480 aa17.34■□□□□ 0.37
C6orf48-209ENST00000395789 WDR63Q8IWG1 891 aa17.34■□□□□ 0.37
C6orf48-209ENST00000395789 NGEFQ8N5V2 710 aa17.34■□□□□ 0.37
C6orf48-209ENST00000395789 C8orf58Q8NAV2 365 aa17.34■□□□□ 0.37
C6orf48-209ENST00000395789 TSR2Q969E8 191 aaKnown RBP17.34■□□□□ 0.37
C6orf48-209ENST00000395789 SPINK5Q9NQ38 1064 aaPredicted RBP17.34■□□□□ 0.37
C6orf48-209ENST00000395789 ZNF330Q9Y3S2 320 aaPredicted RBP17.34■□□□□ 0.37
C6orf48-209ENST00000395789 EIF2S2P20042 333 aaKnown RBP17.33■□□□□ 0.36
C6orf48-209ENST00000395789 NFIXQ14938 502 aa17.33■□□□□ 0.36
C6orf48-209ENST00000395789 DUSP27Q5VZP5 1158 aa17.33■□□□□ 0.36
C6orf48-209ENST00000395789 DZIP3Q86Y13 1208 aaKnown RBP17.33■□□□□ 0.36
C6orf48-209ENST00000395789 KIF13BQ9NQT8 1826 aa17.33■□□□□ 0.36
C6orf48-209ENST00000395789 POLRMTO00411 1230 aaKnown RBP17.32■□□□□ 0.36
C6orf48-209ENST00000395789 NLGN2Q8NFZ4 835 aa17.32■□□□□ 0.36
C6orf48-209ENST00000395789 NRXN2Q9P2S2 1712 aa17.32■□□□□ 0.36
C6orf48-209ENST00000395789 AFDNP55196 1824 aaKnown RBP17.31■□□□□ 0.36
C6orf48-209ENST00000395789 ANXA1P04083 346 aa17.31■□□□□ 0.36
C6orf48-209ENST00000395789 TTLL7Q6ZT98 887 aa17.31■□□□□ 0.36
C6orf48-209ENST00000395789 TSPYL6Q8N831 410 aa17.31■□□□□ 0.36
C6orf48-209ENST00000395789 NECTIN2Q92692 538 aa17.31■□□□□ 0.36
C6orf48-209ENST00000395789 KIAA1551Q9HCM1 1747 aa17.3■□□□□ 0.36
C6orf48-209ENST00000395789 RGL2O15211 777 aa17.3■□□□□ 0.36
C6orf48-209ENST00000395789 MYL6BP14649 208 aa17.3■□□□□ 0.36
C6orf48-209ENST00000395789 TBC1D9BQ66K14 1250 aa17.3■□□□□ 0.36
C6orf48-209ENST00000395789 CD2APQ9Y5K6 639 aa17.3■□□□□ 0.36
C6orf48-209ENST00000395789 C10orf71Q711Q0 1435 aa17.3■□□□□ 0.36
C6orf48-209ENST00000395789 FANCIQ9NVI1 1328 aa17.29■□□□□ 0.36
C6orf48-209ENST00000395789 ELL2O00472 640 aaPredicted RBP17.29■□□□□ 0.36
C6orf48-209ENST00000395789 DDX21Q9NR30 783 aaKnown RBP eCLIP17.29■□□□□ 0.36
C6orf48-209ENST00000395789 GOLGB1Q14789 3259 aaKnown RBP17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms