RNA–Protein interactions for RNA: ENST00000381029.4

VCX3B-201, Transcript of variable charge X-linked 3B, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3B, Length 756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3B-201ENST00000381029 CCDC27Q2M243 656 aa19.44■□□□□ 0.7
VCX3B-201ENST00000381029 SPON1Q9HCB6 807 aa19.44■□□□□ 0.7
VCX3B-201ENST00000381029 ZBTB1Q9Y2K1 713 aa19.44■□□□□ 0.7
VCX3B-201ENST00000381029 RTCBQ9Y3I0 505 aaKnown RBP19.44■□□□□ 0.7
VCX3B-201ENST00000381029 SOS1Q07889 1333 aaPredicted RBP19.44■□□□□ 0.7
VCX3B-201ENST00000381029 ARHGEF1Q92888 912 aaKnown RBP19.43■□□□□ 0.7
VCX3B-201ENST00000381029 TEX13AQ9BXU3 409 aaPredicted RBP19.43■□□□□ 0.7
VCX3B-201ENST00000381029 ATF5Q9Y2D1 282 aaPredicted RBP19.43■□□□□ 0.7
VCX3B-201ENST00000381029 USP16Q9Y5T5 823 aa19.43■□□□□ 0.7
VCX3B-201ENST00000381029 GIGYF1O75420 1035 aaPredicted RBP19.42■□□□□ 0.7
VCX3B-201ENST00000381029 PHF14O94880 888 aa19.42■□□□□ 0.7
VCX3B-201ENST00000381029 SNRPA1P09661 255 aaKnown RBP19.42■□□□□ 0.7
VCX3B-201ENST00000381029 FAM9BQ8IZU0 186 aa19.41■□□□□ 0.7
VCX3B-201ENST00000381029 CFAP44Q96MT7 982 aa19.41■□□□□ 0.7
VCX3B-201ENST00000381029 TSPYL4Q9UJ04 414 aa19.41■□□□□ 0.7
VCX3B-201ENST00000381029 C4AP0C0L4 1744 aa19.41■□□□□ 0.7
VCX3B-201ENST00000381029 STARD3NLO95772 234 aa19.4■□□□□ 0.7
VCX3B-201ENST00000381029 EIF5P55010 431 aaKnown RBP19.4■□□□□ 0.7
VCX3B-201ENST00000381029 TRAPPC3LQ5T215 181 aa19.4■□□□□ 0.7
VCX3B-201ENST00000381029 WWC1Q8IX03 1113 aa19.4■□□□□ 0.7
VCX3B-201ENST00000381029 MIER1Q8N108 512 aa19.4■□□□□ 0.7
VCX3B-201ENST00000381029 A1BGP04217 495 aa19.39■□□□□ 0.69
VCX3B-201ENST00000381029 SENP3-EIF4A1A0A087X0R7 540 aa19.38■□□□□ 0.69
VCX3B-201ENST00000381029 COL15A1P39059 1388 aa19.37■□□□□ 0.69
VCX3B-201ENST00000381029 USP42Q9H9J4 1324 aaKnown RBP19.37■□□□□ 0.69
VCX3B-201ENST00000381029 NBPF26B4DH59 902 aa19.37■□□□□ 0.69
VCX3B-201ENST00000381029 NBPF10Q6P3W6 841 aaKnown RBP19.37■□□□□ 0.69
VCX3B-201ENST00000381029 NBPF15Q8N660 670 aa19.37■□□□□ 0.69
VCX3B-201ENST00000381029 IFT57Q9NWB7 429 aa19.37■□□□□ 0.69
VCX3B-201ENST00000381029 LAMB4A4D0S4 1761 aa19.37■□□□□ 0.69
VCX3B-201ENST00000381029 GYS1P13807 737 aa19.36■□□□□ 0.69
VCX3B-201ENST00000381029 IL6STP40189 918 aaPredicted RBP19.36■□□□□ 0.69
VCX3B-201ENST00000381029 KRT24Q2M2I5 525 aa19.36■□□□□ 0.69
VCX3B-201ENST00000381029 MBIPQ9NS73 344 aa19.36■□□□□ 0.69
VCX3B-201ENST00000381029 MSH5O43196 834 aa19.35■□□□□ 0.69
VCX3B-201ENST00000381029 CANXP27824 592 aaKnown RBP19.35■□□□□ 0.69
VCX3B-201ENST00000381029 MSL1Q68DK7 614 aa19.35■□□□□ 0.69
VCX3B-201ENST00000381029 BCL2L12Q9HB09 334 aa19.35■□□□□ 0.69
VCX3B-201ENST00000381029 SRP68Q9UHB9 627 aaKnown RBP19.35■□□□□ 0.69
VCX3B-201ENST00000381029 ZNF521Q96K83 1311 aa19.34■□□□□ 0.69
VCX3B-201ENST00000381029 LRP10Q7Z4F1 713 aa19.34■□□□□ 0.69
VCX3B-201ENST00000381029 IL16Q14005 1332 aa19.33■□□□□ 0.69
VCX3B-201ENST00000381029 RFC4P35249 363 aa19.33■□□□□ 0.68
VCX3B-201ENST00000381029 PIP4K2AP48426 406 aaPredicted RBP19.33■□□□□ 0.68
VCX3B-201ENST00000381029 GNAI1P63096 354 aa19.33■□□□□ 0.68
VCX3B-201ENST00000381029 NGEFQ8N5V2 710 aa19.33■□□□□ 0.68
VCX3B-201ENST00000381029 NARFQ9UHQ1 456 aa19.33■□□□□ 0.68
VCX3B-201ENST00000381029 CALD1Q05682 793 aaKnown RBP19.32■□□□□ 0.68
VCX3B-201ENST00000381029 FKBP8Q14318 412 aa19.31■□□□□ 0.68
VCX3B-201ENST00000381029 PDIA6Q15084 440 aa19.31■□□□□ 0.68
VCX3B-201ENST00000381029 ARXQ96QS3 562 aa19.31■□□□□ 0.68
VCX3B-201ENST00000381029 LAS1LQ9Y4W2 734 aaKnown RBP19.31■□□□□ 0.68
VCX3B-201ENST00000381029 HOXB7P09629 217 aa19.3■□□□□ 0.68
VCX3B-201ENST00000381029 WDR63Q8IWG1 891 aa19.3■□□□□ 0.68
VCX3B-201ENST00000381029 NLGN1Q8N2Q7 840 aa19.3■□□□□ 0.68
VCX3B-201ENST00000381029 SPINK5Q9NQ38 1064 aaPredicted RBP19.3■□□□□ 0.68
VCX3B-201ENST00000381029 ERBB4Q15303 1308 aa19.29■□□□□ 0.68
VCX3B-201ENST00000381029 CAMTA2O94983 1202 aa19.29■□□□□ 0.68
VCX3B-201ENST00000381029 POLD1P28340 1107 aa19.29■□□□□ 0.68
VCX3B-201ENST00000381029 TM4SF1P30408 202 aa19.29■□□□□ 0.68
VCX3B-201ENST00000381029 USPL1Q5W0Q7 1092 aa19.29■□□□□ 0.68
VCX3B-201ENST00000381029 SCN7AQ01118 1682 aa19.29■□□□□ 0.68
VCX3B-201ENST00000381029 FHDC1Q9C0D6 1143 aaPredicted RBP19.28■□□□□ 0.68
VCX3B-201ENST00000381029 A0A087WZG4 1122 aa19.27■□□□□ 0.68
VCX3B-201ENST00000381029 MMP10P09238 476 aa19.27■□□□□ 0.68
VCX3B-201ENST00000381029 DDR1Q08345 913 aa19.27■□□□□ 0.68
VCX3B-201ENST00000381029 PROSER3Q2NL68 480 aa19.27■□□□□ 0.68
VCX3B-201ENST00000381029 C8orf58Q8NAV2 365 aa19.27■□□□□ 0.68
VCX3B-201ENST00000381029 TSR2Q969E8 191 aaKnown RBP19.27■□□□□ 0.68
VCX3B-201ENST00000381029 TBC1D2BQ9UPU7 963 aa19.27■□□□□ 0.68
VCX3B-201ENST00000381029 SALL2Q9Y467 1007 aaPredicted RBP19.27■□□□□ 0.68
VCX3B-201ENST00000381029 BCORQ6W2J9 1755 aa19.27■□□□□ 0.67
VCX3B-201ENST00000381029 DUSP27Q5VZP5 1158 aa19.26■□□□□ 0.67
VCX3B-201ENST00000381029 SYT17Q9BSW7 474 aa19.26■□□□□ 0.67
VCX3B-201ENST00000381029 RGL2O15211 777 aa19.25■□□□□ 0.67
VCX3B-201ENST00000381029 ZPR1O75312 459 aa19.25■□□□□ 0.67
VCX3B-201ENST00000381029 TSPYL6Q8N831 410 aa19.25■□□□□ 0.67
VCX3B-201ENST00000381029 PPP1R1BQ9UD71 204 aaPredicted RBP19.25■□□□□ 0.67
VCX3B-201ENST00000381029 POLRMTO00411 1230 aaKnown RBP19.24■□□□□ 0.67
VCX3B-201ENST00000381029 EIF2S2P20042 333 aaKnown RBP19.24■□□□□ 0.67
VCX3B-201ENST00000381029 NFIXQ14938 502 aa19.24■□□□□ 0.67
VCX3B-201ENST00000381029 DZIP3Q86Y13 1208 aaKnown RBP19.24■□□□□ 0.67
VCX3B-201ENST00000381029 FANCIQ9NVI1 1328 aa19.24■□□□□ 0.67
VCX3B-201ENST00000381029 NRXN2Q9P2S2 1712 aa19.22■□□□□ 0.67
VCX3B-201ENST00000381029 ANXA1P04083 346 aa19.22■□□□□ 0.67
VCX3B-201ENST00000381029 TTLL7Q6ZT98 887 aa19.22■□□□□ 0.67
VCX3B-201ENST00000381029 DDX21Q9NR30 783 aaKnown RBP eCLIP19.22■□□□□ 0.67
VCX3B-201ENST00000381029 ZNF330Q9Y3S2 320 aaPredicted RBP19.22■□□□□ 0.67
VCX3B-201ENST00000381029 C10orf71Q711Q0 1435 aa19.22■□□□□ 0.67
VCX3B-201ENST00000381029 HDGFL1Q5TGJ6 251 aa19.21■□□□□ 0.67
VCX3B-201ENST00000381029 TBC1D9BQ66K14 1250 aa19.21■□□□□ 0.67
VCX3B-201ENST00000381029 CLEC4GQ6UXB4 293 aa19.21■□□□□ 0.67
VCX3B-201ENST00000381029 CHPF2Q9P2E5 772 aa19.21■□□□□ 0.67
VCX3B-201ENST00000381029 CD2APQ9Y5K6 639 aa19.21■□□□□ 0.67
VCX3B-201ENST00000381029 KIF13BQ9NQT8 1826 aa19.21■□□□□ 0.67
VCX3B-201ENST00000381029 MYL6BP14649 208 aa19.2■□□□□ 0.66
VCX3B-201ENST00000381029 NLGN2Q8NFZ4 835 aa19.2■□□□□ 0.66
VCX3B-201ENST00000381029 NECTIN2Q92692 538 aa19.2■□□□□ 0.66
VCX3B-201ENST00000381029 KIAA1551Q9HCM1 1747 aa19.2■□□□□ 0.66
VCX3B-201ENST00000381029 ERVV-1B6SEH8 477 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms