RNA–Protein interactions for RNA: ENST00000380849.6

TTC39A-205, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 3

Gene TTC39A, Length 769 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-205ENST00000380849 RPS6KA4O75676 772 aa18.18■□□□□ 0.5
TTC39A-205ENST00000380849 CRKLP46109 303 aaKnown RBP18.18■□□□□ 0.5
TTC39A-205ENST00000380849 KCNQ4P56696 695 aa18.18■□□□□ 0.5
TTC39A-205ENST00000380849 SLC16A10Q8TF71 515 aa18.18■□□□□ 0.5
TTC39A-205ENST00000380849 ERBB4Q15303 1308 aa18.18■□□□□ 0.5
TTC39A-205ENST00000380849 A0A087WZG4 1122 aa18.16■□□□□ 0.5
TTC39A-205ENST00000380849 GNPATO15228 680 aa18.16■□□□□ 0.5
TTC39A-205ENST00000380849 ANO8Q9HCE9 1232 aaPredicted RBP18.16■□□□□ 0.5
TTC39A-205ENST00000380849 LAMB4A4D0S4 1761 aa18.15■□□□□ 0.5
TTC39A-205ENST00000380849 IL6STP40189 918 aaPredicted RBP18.15■□□□□ 0.5
TTC39A-205ENST00000380849 HNRNPUQ00839 825 aaKnown RBP eCLIP18.15■□□□□ 0.5
TTC39A-205ENST00000380849 R3HDM1Q15032 1099 aaKnown RBP18.15■□□□□ 0.5
TTC39A-205ENST00000380849 ZNF827Q17R98 1081 aa18.15■□□□□ 0.5
TTC39A-205ENST00000380849 TRAPPC3LQ5T215 181 aa18.15■□□□□ 0.5
TTC39A-205ENST00000380849 INTS5Q6P9B9 1019 aaKnown RBP18.14■□□□□ 0.49
TTC39A-205ENST00000380849 USP16Q9Y5T5 823 aa18.14■□□□□ 0.49
TTC39A-205ENST00000380849 UBR3Q6ZT12 1888 aa18.13■□□□□ 0.49
TTC39A-205ENST00000380849 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.12■□□□□ 0.49
TTC39A-205ENST00000380849 DUSP27Q5VZP5 1158 aa18.12■□□□□ 0.49
TTC39A-205ENST00000380849 RGL2O15211 777 aa18.11■□□□□ 0.49
TTC39A-205ENST00000380849 RFC4P35249 363 aa18.11■□□□□ 0.49
TTC39A-205ENST00000380849 SLFN5Q08AF3 891 aa18.11■□□□□ 0.49
TTC39A-205ENST00000380849 ZBED9Q6R2W3 1325 aa18.11■□□□□ 0.49
TTC39A-205ENST00000380849 PNPLA7Q6ZV29 1317 aa18.11■□□□□ 0.49
TTC39A-205ENST00000380849 FANCIQ9NVI1 1328 aa18.11■□□□□ 0.49
TTC39A-205ENST00000380849 MYH14Q7Z406 1995 aaKnown RBP18.11■□□□□ 0.49
TTC39A-205ENST00000380849 EIF5P55010 431 aaKnown RBP18.1■□□□□ 0.49
TTC39A-205ENST00000380849 CCDC30Q5VVM6 783 aa18.1■□□□□ 0.49
TTC39A-205ENST00000380849 ZNF428Q96B54 188 aa18.1■□□□□ 0.49
TTC39A-205ENST00000380849 DBF4Q9UBU7 674 aaPredicted RBP18.1■□□□□ 0.49
TTC39A-205ENST00000380849 ZBTB1Q9Y2K1 713 aa18.1■□□□□ 0.49
TTC39A-205ENST00000380849 SENP3-EIF4A1A0A087X0R7 540 aa18.09■□□□□ 0.49
TTC39A-205ENST00000380849 CT47B1P0C2W7 299 aaPredicted RBP18.09■□□□□ 0.49
TTC39A-205ENST00000380849 CANXP27824 592 aaKnown RBP18.09■□□□□ 0.49
TTC39A-205ENST00000380849 HDGFL1Q5TGJ6 251 aa18.09■□□□□ 0.49
TTC39A-205ENST00000380849 COL23A1Q86Y22 540 aaPredicted RBP18.09■□□□□ 0.49
TTC39A-205ENST00000380849 TSR2Q969E8 191 aaKnown RBP18.09■□□□□ 0.49
TTC39A-205ENST00000380849 MTFR1LQ9H019 292 aa18.09■□□□□ 0.49
TTC39A-205ENST00000380849 COL15A1P39059 1388 aa18.08■□□□□ 0.49
TTC39A-205ENST00000380849 PSDA5PKW4 1024 aaPredicted RBP18.08■□□□□ 0.48
TTC39A-205ENST00000380849 MSH5O43196 834 aa18.08■□□□□ 0.48
TTC39A-205ENST00000380849 ZPR1O75312 459 aa18.08■□□□□ 0.48
TTC39A-205ENST00000380849 A1BGP04217 495 aa18.08■□□□□ 0.48
TTC39A-205ENST00000380849 EIF2S2P20042 333 aaKnown RBP18.08■□□□□ 0.48
TTC39A-205ENST00000380849 TWISTNBQ3B726 338 aaPredicted RBP18.08■□□□□ 0.48
TTC39A-205ENST00000380849 ARHGEF1Q92888 912 aaKnown RBP18.08■□□□□ 0.48
TTC39A-205ENST00000380849 DDX21Q9NR30 783 aaKnown RBP eCLIP18.08■□□□□ 0.48
TTC39A-205ENST00000380849 PRAMEF22A3QJZ6 481 aa18.07■□□□□ 0.48
TTC39A-205ENST00000380849 PHF14O94880 888 aa18.07■□□□□ 0.48
TTC39A-205ENST00000380849 TRMT2AQ8IZ69 625 aaKnown RBP18.07■□□□□ 0.48
TTC39A-205ENST00000380849 NLGN1Q8N2Q7 840 aa18.07■□□□□ 0.48
TTC39A-205ENST00000380849 C8orf58Q8NAV2 365 aa18.07■□□□□ 0.48
TTC39A-205ENST00000380849 HYPKQ9NX55 129 aa18.07■□□□□ 0.48
TTC39A-205ENST00000380849 TUBGCP6Q96RT7 1819 aa18.07■□□□□ 0.48
TTC39A-205ENST00000380849 CASZ1Q86V15 1759 aa18.07■□□□□ 0.48
TTC39A-205ENST00000380849 STK31Q9BXU1 1019 aa18.06■□□□□ 0.48
TTC39A-205ENST00000380849 NARFQ9UHQ1 456 aa18.06■□□□□ 0.48
TTC39A-205ENST00000380849 EXOSC9Q06265 439 aaKnown RBP18.05■□□□□ 0.48
TTC39A-205ENST00000380849 SPON1Q9HCB6 807 aa18.05■□□□□ 0.48
TTC39A-205ENST00000380849 SPINK5Q9NQ38 1064 aaPredicted RBP18.05■□□□□ 0.48
TTC39A-205ENST00000380849 USP42Q9H9J4 1324 aaKnown RBP18.04■□□□□ 0.48
TTC39A-205ENST00000380849 KRT24Q2M2I5 525 aa18.04■□□□□ 0.48
TTC39A-205ENST00000380849 CLEC4GQ6UXB4 293 aa18.04■□□□□ 0.48
TTC39A-205ENST00000380849 ZNF652Q9Y2D9 606 aa18.04■□□□□ 0.48
TTC39A-205ENST00000380849 CACNA1FO60840 1977 aa18.03■□□□□ 0.48
TTC39A-205ENST00000380849 NBPF26B4DH59 902 aa18.03■□□□□ 0.48
TTC39A-205ENST00000380849 ERVV-1B6SEH8 477 aa18.03■□□□□ 0.48
TTC39A-205ENST00000380849 ELL2O00472 640 aaPredicted RBP18.03■□□□□ 0.48
TTC39A-205ENST00000380849 VAMP4O75379 141 aa18.03■□□□□ 0.48
TTC39A-205ENST00000380849 POLD1P28340 1107 aa18.03■□□□□ 0.48
TTC39A-205ENST00000380849 NBPF10Q6P3W6 841 aaKnown RBP18.03■□□□□ 0.48
TTC39A-205ENST00000380849 KIF6Q6ZMV9 814 aa18.03■□□□□ 0.48
TTC39A-205ENST00000380849 DZIP3Q86Y13 1208 aaKnown RBP18.03■□□□□ 0.48
TTC39A-205ENST00000380849 NBPF15Q8N660 670 aa18.03■□□□□ 0.48
TTC39A-205ENST00000380849 PDIA6Q15084 440 aa18.02■□□□□ 0.48
TTC39A-205ENST00000380849 ZNF330Q9Y3S2 320 aaPredicted RBP18.02■□□□□ 0.48
TTC39A-205ENST00000380849 MYL6BP14649 208 aa18.01■□□□□ 0.47
TTC39A-205ENST00000380849 TSPYL6Q8N831 410 aa18.01■□□□□ 0.47
TTC39A-205ENST00000380849 CHPF2Q9P2E5 772 aa18.01■□□□□ 0.47
TTC39A-205ENST00000380849 C4AP0C0L4 1744 aa18.01■□□□□ 0.47
TTC39A-205ENST00000380849 GYS1P13807 737 aa18■□□□□ 0.47
TTC39A-205ENST00000380849 AMIGO3Q86WK7 504 aa18■□□□□ 0.47
TTC39A-205ENST00000380849 CDCA7LQ96GN5 454 aa18■□□□□ 0.47
TTC39A-205ENST00000380849 ARXQ96QS3 562 aa18■□□□□ 0.47
TTC39A-205ENST00000380849 COL24A1Q17RW2 1714 aa17.99■□□□□ 0.47
TTC39A-205ENST00000380849 DDX58O95786 925 aaKnown RBP17.99■□□□□ 0.47
TTC39A-205ENST00000380849 HSP90AB3PQ58FF7 597 aa17.99■□□□□ 0.47
TTC39A-205ENST00000380849 USPL1Q5W0Q7 1092 aa17.99■□□□□ 0.47
TTC39A-205ENST00000380849 MAP3K15Q6ZN16 1313 aa17.98■□□□□ 0.47
TTC39A-205ENST00000380849 ZBTB7AO95365 584 aa17.98■□□□□ 0.47
TTC39A-205ENST00000380849 ALDH1L2Q3SY69 923 aa17.98■□□□□ 0.47
TTC39A-205ENST00000380849 LRP10Q7Z4F1 713 aa17.98■□□□□ 0.47
TTC39A-205ENST00000380849 NECTIN2Q92692 538 aa17.98■□□□□ 0.47
TTC39A-205ENST00000380849 TBC1D2BQ9UPU7 963 aa17.98■□□□□ 0.47
TTC39A-205ENST00000380849 CAMTA2O94983 1202 aa17.97■□□□□ 0.47
TTC39A-205ENST00000380849 COPS6Q7L5N1 327 aa17.97■□□□□ 0.47
TTC39A-205ENST00000380849 PDGFDQ9GZP0 370 aaPredicted RBP17.97■□□□□ 0.47
TTC39A-205ENST00000380849 SCN7AQ01118 1682 aa17.96■□□□□ 0.47
TTC39A-205ENST00000380849 SLC4A2P04920 1241 aa17.96■□□□□ 0.47
TTC39A-205ENST00000380849 PIP4K2AP48426 406 aaPredicted RBP17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms