RNA–Protein interactions for RNA: ENST00000380171.7

ATRAID-201, Transcript of all-trans retinoic acid induced differentiation factor, humanhuman

TSL 1 (best) BASIC

Gene ATRAID, Length 1,240 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRAID-201ENST00000380171 RTCBQ9Y3I0 505 aaKnown RBP34.91■■■■□ 3.18
ATRAID-201ENST00000380171 C4AP0C0L4 1744 aa34.91■■■■□ 3.18
ATRAID-201ENST00000380171 PRAMEF22A3QJZ6 481 aa34.9■■■■□ 3.18
ATRAID-201ENST00000380171 MSH5O43196 834 aa34.9■■■■□ 3.18
ATRAID-201ENST00000380171 SSFA2P28290 1259 aa34.9■■■■□ 3.18
ATRAID-201ENST00000380171 AMIGO3Q86WK7 504 aa34.9■■■■□ 3.18
ATRAID-201ENST00000380171 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP34.89■■■■□ 3.18
ATRAID-201ENST00000380171 INTS5Q6P9B9 1019 aaKnown RBP34.89■■■■□ 3.18
ATRAID-201ENST00000380171 MBIPQ9NS73 344 aa34.89■■■■□ 3.18
ATRAID-201ENST00000380171 ZNF853P0CG23 659 aa34.88■■■■□ 3.17
ATRAID-201ENST00000380171 SMIM5Q71RC9 77 aa34.88■■■■□ 3.17
ATRAID-201ENST00000380171 RPS6KA4O75676 772 aa34.87■■■■□ 3.17
ATRAID-201ENST00000380171 COL23A1Q86Y22 540 aaPredicted RBP34.87■■■■□ 3.17
ATRAID-201ENST00000380171 ZBTB1Q9Y2K1 713 aa34.87■■■■□ 3.17
ATRAID-201ENST00000380171 IL16Q14005 1332 aa34.86■■■■□ 3.17
ATRAID-201ENST00000380171 GIGYF1O75420 1035 aaPredicted RBP34.86■■■■□ 3.17
ATRAID-201ENST00000380171 USP16Q9Y5T5 823 aa34.85■■■■□ 3.17
ATRAID-201ENST00000380171 WDR63Q8IWG1 891 aa34.84■■■■□ 3.17
ATRAID-201ENST00000380171 ZBTB7AO95365 584 aa34.83■■■■□ 3.17
ATRAID-201ENST00000380171 ADRA2BP18089 450 aa34.83■■■■□ 3.17
ATRAID-201ENST00000380171 CANXP27824 592 aaKnown RBP34.83■■■■□ 3.17
ATRAID-201ENST00000380171 LRP5O75197 1615 aa34.83■■■■□ 3.17
ATRAID-201ENST00000380171 SOS1Q07889 1333 aaPredicted RBP34.82■■■■□ 3.17
ATRAID-201ENST00000380171 TRAPPC3LQ5T215 181 aa34.82■■■■□ 3.16
ATRAID-201ENST00000380171 COL15A1P39059 1388 aa34.81■■■■□ 3.16
ATRAID-201ENST00000380171 A1BGP04217 495 aa34.8■■■■□ 3.16
ATRAID-201ENST00000380171 KRT24Q2M2I5 525 aa34.8■■■■□ 3.16
ATRAID-201ENST00000380171 TSR2Q969E8 191 aaKnown RBP34.8■■■■□ 3.16
ATRAID-201ENST00000380171 SLC16A10Q8TF71 515 aa34.79■■■■□ 3.16
ATRAID-201ENST00000380171 MTFR1LQ9H019 292 aa34.79■■■■□ 3.16
ATRAID-201ENST00000380171 ZNF521Q96K83 1311 aa34.78■■■■□ 3.16
ATRAID-201ENST00000380171 ARHGEF1Q92888 912 aaKnown RBP34.77■■■■□ 3.16
ATRAID-201ENST00000380171 ZNF330Q9Y3S2 320 aaPredicted RBP34.77■■■■□ 3.16
ATRAID-201ENST00000380171 COL24A1Q17RW2 1714 aa34.76■■■■□ 3.16
ATRAID-201ENST00000380171 RFC4P35249 363 aa34.76■■■■□ 3.16
ATRAID-201ENST00000380171 PIP4K2AP48426 406 aaPredicted RBP34.76■■■■□ 3.16
ATRAID-201ENST00000380171 SPON1Q9HCB6 807 aa34.75■■■■□ 3.15
ATRAID-201ENST00000380171 ATF5Q9Y2D1 282 aaPredicted RBP34.75■■■■□ 3.15
ATRAID-201ENST00000380171 FANCIQ9NVI1 1328 aa34.75■■■■□ 3.15
ATRAID-201ENST00000380171 IL6STP40189 918 aaPredicted RBP34.74■■■■□ 3.15
ATRAID-201ENST00000380171 SCN7AQ01118 1682 aa34.73■■■■□ 3.15
ATRAID-201ENST00000380171 EIF2S2P20042 333 aaKnown RBP34.73■■■■□ 3.15
ATRAID-201ENST00000380171 MSL1Q68DK7 614 aa34.73■■■■□ 3.15
ATRAID-201ENST00000380171 NPM2Q86SE8 214 aaKnown RBP34.73■■■■□ 3.15
ATRAID-201ENST00000380171 HOXB7P09629 217 aa34.72■■■■□ 3.15
ATRAID-201ENST00000380171 EIF5P55010 431 aaKnown RBP34.72■■■■□ 3.15
ATRAID-201ENST00000380171 DUSP27Q5VZP5 1158 aa34.72■■■■□ 3.15
ATRAID-201ENST00000380171 MYH16Q9H6N6 1097 aa34.71■■■■□ 3.15
ATRAID-201ENST00000380171 BCORQ6W2J9 1755 aa34.7■■■■□ 3.15
ATRAID-201ENST00000380171 A0A087WZG4 1122 aa34.7■■■■□ 3.15
ATRAID-201ENST00000380171 NBPF26B4DH59 902 aa34.7■■■■□ 3.15
ATRAID-201ENST00000380171 NBPF10Q6P3W6 841 aaKnown RBP34.7■■■■□ 3.15
ATRAID-201ENST00000380171 NBPF15Q8N660 670 aa34.7■■■■□ 3.15
ATRAID-201ENST00000380171 ERBB4Q15303 1308 aa34.7■■■■□ 3.15
ATRAID-201ENST00000380171 USP42Q9H9J4 1324 aaKnown RBP34.7■■■■□ 3.15
ATRAID-201ENST00000380171 NECTIN2Q92692 538 aa34.69■■■■□ 3.14
ATRAID-201ENST00000380171 SPINK5Q9NQ38 1064 aaPredicted RBP34.69■■■■□ 3.14
ATRAID-201ENST00000380171 SRP68Q9UHB9 627 aaKnown RBP34.69■■■■□ 3.14
ATRAID-201ENST00000380171 HNRNPUQ00839 825 aaKnown RBP eCLIP34.68■■■■□ 3.14
ATRAID-201ENST00000380171 HDGFL1Q5TGJ6 251 aa34.68■■■■□ 3.14
ATRAID-201ENST00000380171 ELL2O00472 640 aaPredicted RBP34.67■■■■□ 3.14
ATRAID-201ENST00000380171 ZPR1O75312 459 aa34.67■■■■□ 3.14
ATRAID-201ENST00000380171 GOLGA2Q08379 1002 aa34.67■■■■□ 3.14
ATRAID-201ENST00000380171 C8orf58Q8NAV2 365 aa34.67■■■■□ 3.14
ATRAID-201ENST00000380171 MYL6BP14649 208 aa34.65■■■■□ 3.14
ATRAID-201ENST00000380171 ARXQ96QS3 562 aa34.65■■■■□ 3.14
ATRAID-201ENST00000380171 NARFQ9UHQ1 456 aa34.65■■■■□ 3.14
ATRAID-201ENST00000380171 GYS1P13807 737 aa34.64■■■■□ 3.14
ATRAID-201ENST00000380171 POLD1P28340 1107 aa34.64■■■■□ 3.14
ATRAID-201ENST00000380171 PTGER2P43116 358 aa34.64■■■■□ 3.14
ATRAID-201ENST00000380171 USPL1Q5W0Q7 1092 aa34.63■■■■□ 3.13
ATRAID-201ENST00000380171 E9PSI1 815 aa34.62■■■■□ 3.13
ATRAID-201ENST00000380171 DZIP3Q86Y13 1208 aaKnown RBP34.62■■■■□ 3.13
ATRAID-201ENST00000380171 TSPYL6Q8N831 410 aa34.62■■■■□ 3.13
ATRAID-201ENST00000380171 TBC1D2BQ9UPU7 963 aa34.62■■■■□ 3.13
ATRAID-201ENST00000380171 SGIP1Q9BQI5 828 aa34.61■■■■□ 3.13
ATRAID-201ENST00000380171 TWISTNBQ3B726 338 aaPredicted RBP34.6■■■■□ 3.13
ATRAID-201ENST00000380171 CHPF2Q9P2E5 772 aa34.6■■■■□ 3.13
ATRAID-201ENST00000380171 PPP1R1BQ9UD71 204 aaPredicted RBP34.6■■■■□ 3.13
ATRAID-201ENST00000380171 EXOSC9Q06265 439 aaKnown RBP34.59■■■■□ 3.13
ATRAID-201ENST00000380171 PROSER3Q2NL68 480 aa34.59■■■■□ 3.13
ATRAID-201ENST00000380171 NLGN1Q8N2Q7 840 aa34.59■■■■□ 3.13
ATRAID-201ENST00000380171 ANXA1P04083 346 aa34.58■■■■□ 3.13
ATRAID-201ENST00000380171 PDIA6Q15084 440 aa34.58■■■■□ 3.13
ATRAID-201ENST00000380171 FKBP8Q14318 412 aa34.57■■■■□ 3.12
ATRAID-201ENST00000380171 DDX21Q9NR30 783 aaKnown RBP eCLIP34.57■■■■□ 3.12
ATRAID-201ENST00000380171 SLFN5Q08AF3 891 aa34.56■■■■□ 3.12
ATRAID-201ENST00000380171 CHMP4AQ9BY43 222 aa34.56■■■■□ 3.12
ATRAID-201ENST00000380171 DBF4Q9UBU7 674 aaPredicted RBP34.56■■■■□ 3.12
ATRAID-201ENST00000380171 CAMTA2O94983 1202 aa34.55■■■■□ 3.12
ATRAID-201ENST00000380171 KIF6Q6ZMV9 814 aa34.55■■■■□ 3.12
ATRAID-201ENST00000380171 CDCA7LQ96GN5 454 aa34.55■■■■□ 3.12
ATRAID-201ENST00000380171 MMP10P09238 476 aa34.54■■■■□ 3.12
ATRAID-201ENST00000380171 CCDC30Q5VVM6 783 aa34.54■■■■□ 3.12
ATRAID-201ENST00000380171 BCL2L12Q9HB09 334 aa34.54■■■■□ 3.12
ATRAID-201ENST00000380171 LRP10Q7Z4F1 713 aa34.53■■■■□ 3.12
ATRAID-201ENST00000380171 TTLL7Q6ZT98 887 aa34.51■■■■□ 3.12
ATRAID-201ENST00000380171 HYPKQ9NX55 129 aa34.5■■■■□ 3.11
ATRAID-201ENST00000380171 ZNF652Q9Y2D9 606 aa34.5■■■■□ 3.11
ATRAID-201ENST00000380171 NUP98P52948 1817 aa34.49■■■■□ 3.11
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms