RNA–Protein interactions for RNA: ENST00000373568.6

HDAC8-205, Transcript of histone deacetylase 8, humanhuman

TSL 5

Gene HDAC8, Length 1,037 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-205ENST00000373568 RTCBQ9Y3I0 505 aaKnown RBP17.29■□□□□ 0.36
HDAC8-205ENST00000373568 SOS1Q07889 1333 aaPredicted RBP17.28■□□□□ 0.36
HDAC8-205ENST00000373568 EIF4A1P60842 406 aaKnown RBP17.28■□□□□ 0.36
HDAC8-205ENST00000373568 NCBP3Q53F19 620 aaKnown RBP17.28■□□□□ 0.36
HDAC8-205ENST00000373568 ATF5Q9Y2D1 282 aaPredicted RBP17.28■□□□□ 0.36
HDAC8-205ENST00000373568 CHL1O00533 1208 aa17.27■□□□□ 0.36
HDAC8-205ENST00000373568 ADRA2BP18089 450 aa17.27■□□□□ 0.36
HDAC8-205ENST00000373568 CCDC27Q2M243 656 aa17.27■□□□□ 0.36
HDAC8-205ENST00000373568 FAM9BQ8IZU0 186 aa17.27■□□□□ 0.36
HDAC8-205ENST00000373568 TEX13AQ9BXU3 409 aaPredicted RBP17.27■□□□□ 0.36
HDAC8-205ENST00000373568 SNRPA1P09661 255 aaKnown RBP17.26■□□□□ 0.35
HDAC8-205ENST00000373568 ZNF853P0CG23 659 aa17.26■□□□□ 0.35
HDAC8-205ENST00000373568 ARHGEF1Q92888 912 aaKnown RBP17.26■□□□□ 0.35
HDAC8-205ENST00000373568 TSPYL4Q9UJ04 414 aa17.26■□□□□ 0.35
HDAC8-205ENST00000373568 USP16Q9Y5T5 823 aa17.26■□□□□ 0.35
HDAC8-205ENST00000373568 SENP3-EIF4A1A0A087X0R7 540 aa17.25■□□□□ 0.35
HDAC8-205ENST00000373568 GIGYF1O75420 1035 aaPredicted RBP17.25■□□□□ 0.35
HDAC8-205ENST00000373568 STARD3NLO95772 234 aa17.25■□□□□ 0.35
HDAC8-205ENST00000373568 TRAPPC3LQ5T215 181 aa17.25■□□□□ 0.35
HDAC8-205ENST00000373568 SCN7AQ01118 1682 aa17.25■□□□□ 0.35
HDAC8-205ENST00000373568 MIER1Q8N108 512 aa17.24■□□□□ 0.35
HDAC8-205ENST00000373568 CFAP44Q96MT7 982 aa17.24■□□□□ 0.35
HDAC8-205ENST00000373568 BCORQ6W2J9 1755 aa17.24■□□□□ 0.35
HDAC8-205ENST00000373568 COL15A1P39059 1388 aa17.24■□□□□ 0.35
HDAC8-205ENST00000373568 MSH5O43196 834 aa17.23■□□□□ 0.35
HDAC8-205ENST00000373568 A1BGP04217 495 aa17.23■□□□□ 0.35
HDAC8-205ENST00000373568 EIF5P55010 431 aaKnown RBP17.23■□□□□ 0.35
HDAC8-205ENST00000373568 WWC1Q8IX03 1113 aa17.23■□□□□ 0.35
HDAC8-205ENST00000373568 USP42Q9H9J4 1324 aaKnown RBP17.22■□□□□ 0.35
HDAC8-205ENST00000373568 MSL1Q68DK7 614 aa17.22■□□□□ 0.35
HDAC8-205ENST00000373568 IFT57Q9NWB7 429 aa17.22■□□□□ 0.35
HDAC8-205ENST00000373568 NBPF26B4DH59 902 aa17.21■□□□□ 0.35
HDAC8-205ENST00000373568 GYS1P13807 737 aa17.21■□□□□ 0.35
HDAC8-205ENST00000373568 CANXP27824 592 aaKnown RBP17.21■□□□□ 0.35
HDAC8-205ENST00000373568 IL6STP40189 918 aaPredicted RBP17.21■□□□□ 0.35
HDAC8-205ENST00000373568 NBPF10Q6P3W6 841 aaKnown RBP17.21■□□□□ 0.35
HDAC8-205ENST00000373568 NBPF15Q8N660 670 aa17.21■□□□□ 0.35
HDAC8-205ENST00000373568 MBIPQ9NS73 344 aa17.21■□□□□ 0.35
HDAC8-205ENST00000373568 CALD1Q05682 793 aaKnown RBP17.2■□□□□ 0.34
HDAC8-205ENST00000373568 KRT24Q2M2I5 525 aa17.2■□□□□ 0.34
HDAC8-205ENST00000373568 SRP68Q9UHB9 627 aaKnown RBP17.2■□□□□ 0.34
HDAC8-205ENST00000373568 RFC4P35249 363 aa17.19■□□□□ 0.34
HDAC8-205ENST00000373568 PIP4K2AP48426 406 aaPredicted RBP17.19■□□□□ 0.34
HDAC8-205ENST00000373568 GNAI1P63096 354 aa17.19■□□□□ 0.34
HDAC8-205ENST00000373568 LAS1LQ9Y4W2 734 aaKnown RBP17.19■□□□□ 0.34
HDAC8-205ENST00000373568 ARXQ96QS3 562 aa17.18■□□□□ 0.34
HDAC8-205ENST00000373568 BCL2L12Q9HB09 334 aa17.18■□□□□ 0.34
HDAC8-205ENST00000373568 NARFQ9UHQ1 456 aa17.18■□□□□ 0.34
HDAC8-205ENST00000373568 IL16Q14005 1332 aa17.18■□□□□ 0.34
HDAC8-205ENST00000373568 ZNF521Q96K83 1311 aa17.18■□□□□ 0.34
HDAC8-205ENST00000373568 POLD1P28340 1107 aa17.17■□□□□ 0.34
HDAC8-205ENST00000373568 KIF13BQ9NQT8 1826 aa17.17■□□□□ 0.34
HDAC8-205ENST00000373568 FKBP8Q14318 412 aa17.16■□□□□ 0.34
HDAC8-205ENST00000373568 USPL1Q5W0Q7 1092 aa17.16■□□□□ 0.34
HDAC8-205ENST00000373568 LRP10Q7Z4F1 713 aa17.16■□□□□ 0.34
HDAC8-205ENST00000373568 NLGN1Q8N2Q7 840 aa17.16■□□□□ 0.34
HDAC8-205ENST00000373568 NGEFQ8N5V2 710 aa17.16■□□□□ 0.34
HDAC8-205ENST00000373568 SALL2Q9Y467 1007 aaPredicted RBP17.16■□□□□ 0.34
HDAC8-205ENST00000373568 ERBB4Q15303 1308 aa17.16■□□□□ 0.34
HDAC8-205ENST00000373568 NRXN2Q9P2S2 1712 aa17.16■□□□□ 0.34
HDAC8-205ENST00000373568 AFDNP55196 1824 aaKnown RBP17.15■□□□□ 0.34
HDAC8-205ENST00000373568 A0A087WZG4 1122 aa17.15■□□□□ 0.34
HDAC8-205ENST00000373568 PDIA6Q15084 440 aa17.15■□□□□ 0.34
HDAC8-205ENST00000373568 WDR63Q8IWG1 891 aa17.15■□□□□ 0.34
HDAC8-205ENST00000373568 PPP1R1BQ9UD71 204 aaPredicted RBP17.15■□□□□ 0.34
HDAC8-205ENST00000373568 KIAA1551Q9HCM1 1747 aa17.15■□□□□ 0.34
HDAC8-205ENST00000373568 MMP10P09238 476 aa17.14■□□□□ 0.33
HDAC8-205ENST00000373568 HOXB7P09629 217 aa17.14■□□□□ 0.33
HDAC8-205ENST00000373568 FHDC1Q9C0D6 1143 aaPredicted RBP17.14■□□□□ 0.33
HDAC8-205ENST00000373568 ZPR1O75312 459 aa17.13■□□□□ 0.33
HDAC8-205ENST00000373568 CAMTA2O94983 1202 aa17.13■□□□□ 0.33
HDAC8-205ENST00000373568 DDR1Q08345 913 aa17.13■□□□□ 0.33
HDAC8-205ENST00000373568 TSR2Q969E8 191 aaKnown RBP17.13■□□□□ 0.33
HDAC8-205ENST00000373568 SPINK5Q9NQ38 1064 aaPredicted RBP17.13■□□□□ 0.33
HDAC8-205ENST00000373568 TBC1D2BQ9UPU7 963 aa17.13■□□□□ 0.33
HDAC8-205ENST00000373568 TM4SF1P30408 202 aa17.12■□□□□ 0.33
HDAC8-205ENST00000373568 PROSER3Q2NL68 480 aa17.12■□□□□ 0.33
HDAC8-205ENST00000373568 DUSP27Q5VZP5 1158 aa17.12■□□□□ 0.33
HDAC8-205ENST00000373568 C8orf58Q8NAV2 365 aa17.12■□□□□ 0.33
HDAC8-205ENST00000373568 ZNF330Q9Y3S2 320 aaPredicted RBP17.12■□□□□ 0.33
HDAC8-205ENST00000373568 NUP98P52948 1817 aa17.12■□□□□ 0.33
HDAC8-205ENST00000373568 EIF2S2P20042 333 aaKnown RBP17.11■□□□□ 0.33
HDAC8-205ENST00000373568 DZIP3Q86Y13 1208 aaKnown RBP17.11■□□□□ 0.33
HDAC8-205ENST00000373568 SYT17Q9BSW7 474 aa17.11■□□□□ 0.33
HDAC8-205ENST00000373568 FANCIQ9NVI1 1328 aa17.11■□□□□ 0.33
HDAC8-205ENST00000373568 C10orf71Q711Q0 1435 aa17.11■□□□□ 0.33
HDAC8-205ENST00000373568 NFIXQ14938 502 aa17.1■□□□□ 0.33
HDAC8-205ENST00000373568 POLRMTO00411 1230 aaKnown RBP17.09■□□□□ 0.33
HDAC8-205ENST00000373568 RGL2O15211 777 aa17.09■□□□□ 0.33
HDAC8-205ENST00000373568 ANXA1P04083 346 aa17.09■□□□□ 0.33
HDAC8-205ENST00000373568 MYL6BP14649 208 aa17.09■□□□□ 0.33
HDAC8-205ENST00000373568 HDGFL1Q5TGJ6 251 aa17.09■□□□□ 0.33
HDAC8-205ENST00000373568 TTLL7Q6ZT98 887 aa17.09■□□□□ 0.33
HDAC8-205ENST00000373568 TSPYL6Q8N831 410 aa17.09■□□□□ 0.33
HDAC8-205ENST00000373568 NECTIN2Q92692 538 aa17.09■□□□□ 0.33
HDAC8-205ENST00000373568 TBC1D9BQ66K14 1250 aa17.08■□□□□ 0.32
HDAC8-205ENST00000373568 DDX21Q9NR30 783 aaKnown RBP eCLIP17.08■□□□□ 0.32
HDAC8-205ENST00000373568 CHPF2Q9P2E5 772 aa17.08■□□□□ 0.32
HDAC8-205ENST00000373568 ANKRD36CQ5JPF3 1778 aa17.07■□□□□ 0.32
HDAC8-205ENST00000373568 ELL2O00472 640 aaPredicted RBP17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms