RNA–Protein interactions for RNA: ENST00000373157.8

COL6A5-203, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 2

Gene COL6A5, Length 1,770 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-203ENST00000373157 SSFA2P28290 1259 aa4.96□□□□□ -1.62
COL6A5-203ENST00000373157 RBM25P49756 843 aaKnown RBP4.96□□□□□ -1.62
COL6A5-203ENST00000373157 GTF2IP78347 998 aa4.96□□□□□ -1.62
COL6A5-203ENST00000373157 SND1Q7KZF4 910 aaKnown RBP eCLIP4.96□□□□□ -1.62
COL6A5-203ENST00000373157 LARGE2Q8N3Y3 721 aa4.96□□□□□ -1.62
COL6A5-203ENST00000373157 CLP1Q92989 425 aaKnown RBP4.96□□□□□ -1.62
COL6A5-203ENST00000373157 ESPNB1AK53 854 aa4.95□□□□□ -1.62
COL6A5-203ENST00000373157 ZBTB7BO15156 539 aaPredicted RBP4.95□□□□□ -1.62
COL6A5-203ENST00000373157 ITGB7P26010 798 aa4.95□□□□□ -1.62
COL6A5-203ENST00000373157 NBPF20Q3BBV1 942 aa4.95□□□□□ -1.62
COL6A5-203ENST00000373157 FOXD4L5Q5VV16 416 aaPredicted RBP4.95□□□□□ -1.62
COL6A5-203ENST00000373157 TXNDC2Q86VQ3 553 aa4.95□□□□□ -1.62
COL6A5-203ENST00000373157 DHX37Q8IY37 1157 aaKnown RBP4.95□□□□□ -1.62
COL6A5-203ENST00000373157 FOXD4L4Q8WXT5 416 aaPredicted RBP4.95□□□□□ -1.62
COL6A5-203ENST00000373157 MBIPQ9NS73 344 aa4.95□□□□□ -1.62
COL6A5-203ENST00000373157 PCDHB11Q9Y5F2 797 aa4.95□□□□□ -1.62
COL6A5-203ENST00000373157 DKK1O94907 266 aa4.94□□□□□ -1.62
COL6A5-203ENST00000373157 NR3C2P08235 984 aa4.94□□□□□ -1.62
COL6A5-203ENST00000373157 ATP2B4P23634 1241 aa4.94□□□□□ -1.62
COL6A5-203ENST00000373157 GAS6Q14393 721 aa4.94□□□□□ -1.62
COL6A5-203ENST00000373157 CCDC27Q2M243 656 aa4.94□□□□□ -1.62
COL6A5-203ENST00000373157 TRMT44Q8IYL2 757 aaKnown RBP4.94□□□□□ -1.62
COL6A5-203ENST00000373157 SIX5Q8N196 739 aa4.94□□□□□ -1.62
COL6A5-203ENST00000373157 CCER1Q8TC90 406 aaPredicted RBP4.94□□□□□ -1.62
COL6A5-203ENST00000373157 USP35Q9P2H5 1018 aa4.94□□□□□ -1.62
COL6A5-203ENST00000373157 FIGNL2A6NMB9 653 aa4.93□□□□□ -1.62
COL6A5-203ENST00000373157 ARID4AP29374 1257 aaPredicted RBP4.93□□□□□ -1.62
COL6A5-203ENST00000373157 RAB15P59190 212 aa4.93□□□□□ -1.62
COL6A5-203ENST00000373157 SWI5Q1ZZU3 235 aa4.93□□□□□ -1.62
COL6A5-203ENST00000373157 BCCIPQ9P287 314 aaKnown RBP eCLIP4.93□□□□□ -1.62
COL6A5-203ENST00000373157 PCDHGA11Q9Y5H2 935 aa4.93□□□□□ -1.62
COL6A5-203ENST00000373157 SFI1A8K8P3 1242 aa4.93□□□□□ -1.62
COL6A5-203ENST00000373157 E9PSI1 815 aa4.93□□□□□ -1.62
COL6A5-203ENST00000373157 SPINT1O43278 529 aa4.93□□□□□ -1.62
COL6A5-203ENST00000373157 SCNN1AP37088 669 aa4.93□□□□□ -1.62
COL6A5-203ENST00000373157 SEC13P55735 322 aa4.93□□□□□ -1.62
COL6A5-203ENST00000373157 PSME1Q06323 249 aa4.93□□□□□ -1.62
COL6A5-203ENST00000373157 USP4Q13107 963 aa4.93□□□□□ -1.62
COL6A5-203ENST00000373157 CCDC102BQ68D86 513 aa4.93□□□□□ -1.62
COL6A5-203ENST00000373157 SEPT12Q8IYM1 358 aa4.93□□□□□ -1.62
COL6A5-203ENST00000373157 TPCN2Q8NHX9 752 aa4.93□□□□□ -1.62
COL6A5-203ENST00000373157 GMCL1Q96IK5 515 aa4.93□□□□□ -1.62
COL6A5-203ENST00000373157 KCTD15Q96SI1 283 aaPredicted RBP4.93□□□□□ -1.62
COL6A5-203ENST00000373157 SEMA6BQ9H3T3 888 aa4.93□□□□□ -1.62
COL6A5-203ENST00000373157 ZFP64Q9NPA5 681 aa4.93□□□□□ -1.62
COL6A5-203ENST00000373157 CDV3Q9UKY7 258 aaKnown RBP4.93□□□□□ -1.62
COL6A5-203ENST00000373157 RBM19Q9Y4C8 960 aaKnown RBP4.93□□□□□ -1.62
COL6A5-203ENST00000373157 PRMT3O60678 531 aa4.92□□□□□ -1.62
COL6A5-203ENST00000373157 GRM5P41594 1212 aa4.92□□□□□ -1.62
COL6A5-203ENST00000373157 ARTNQ5T4W7 220 aa4.92□□□□□ -1.62
COL6A5-203ENST00000373157 SIRT1Q96EB6 747 aa4.92□□□□□ -1.62
COL6A5-203ENST00000373157 MKL2Q9ULH7 1088 aa4.92□□□□□ -1.62
COL6A5-203ENST00000373157 SCO2A0A1W2PP80 73 aa4.91□□□□□ -1.62
COL6A5-203ENST00000373157 LGR5O75473 907 aa4.91□□□□□ -1.62
COL6A5-203ENST00000373157 ARID5BQ14865 1188 aa4.91□□□□□ -1.62
COL6A5-203ENST00000373157 ZNF326Q5BKZ1 582 aaKnown RBP4.91□□□□□ -1.62
COL6A5-203ENST00000373157 INTS6LQ5JSJ4 861 aaKnown RBP4.91□□□□□ -1.62
COL6A5-203ENST00000373157 VASH1Q7L8A9 365 aaPredicted RBP4.91□□□□□ -1.62
COL6A5-203ENST00000373157 PRIMPOLQ96LW4 560 aa4.91□□□□□ -1.62
COL6A5-203ENST00000373157 KRTAP4-9Q9BYQ8 210 aa4.91□□□□□ -1.62
COL6A5-203ENST00000373157 EMILIN1Q9Y6C2 1016 aa4.91□□□□□ -1.62
COL6A5-203ENST00000373157 IGF1RP08069 1367 aa4.91□□□□□ -1.62
COL6A5-203ENST00000373157 SERPINB4P48594 390 aa4.91□□□□□ -1.62
COL6A5-203ENST00000373157 NBPF11Q86T75 865 aa4.91□□□□□ -1.62
COL6A5-203ENST00000373157 ZNF428Q96B54 188 aa4.91□□□□□ -1.62
COL6A5-203ENST00000373157 ERVH48-1M5A8F1 160 aa4.9□□□□□ -1.63
COL6A5-203ENST00000373157 COBLO75128 1261 aa4.9□□□□□ -1.63
COL6A5-203ENST00000373157 MYCP01106 439 aaPredicted RBP4.9□□□□□ -1.63
COL6A5-203ENST00000373157 SCTRP47872 440 aa4.9□□□□□ -1.63
COL6A5-203ENST00000373157 OCLNQ16625 522 aa4.9□□□□□ -1.63
COL6A5-203ENST00000373157 CCDC125Q86Z20 511 aa4.9□□□□□ -1.63
COL6A5-203ENST00000373157 MAP4K5Q9Y4K4 846 aa4.9□□□□□ -1.63
COL6A5-203ENST00000373157 SOWAHDA6NJG2 315 aa4.89□□□□□ -1.63
COL6A5-203ENST00000373157 C1orf216Q8TAB5 229 aa4.89□□□□□ -1.63
COL6A5-203ENST00000373157 ACDQ96AP0 544 aa4.89□□□□□ -1.63
COL6A5-203ENST00000373157 HINFPQ9BQA5 517 aa4.89□□□□□ -1.63
COL6A5-203ENST00000373157 CXXC1Q9P0U4 656 aaPredicted RBP4.89□□□□□ -1.63
COL6A5-203ENST00000373157 ARID4BQ4LE39 1312 aaPredicted RBP4.89□□□□□ -1.63
COL6A5-203ENST00000373157 OIP5O43482 229 aa4.88□□□□□ -1.63
COL6A5-203ENST00000373157 COL8A1P27658 744 aa4.88□□□□□ -1.63
COL6A5-203ENST00000373157 FOXR1Q6PIV2 292 aa4.88□□□□□ -1.63
COL6A5-203ENST00000373157 TAS1R3Q7RTX0 852 aa4.88□□□□□ -1.63
COL6A5-203ENST00000373157 SERBP1Q8NC51 408 aaKnown RBP eCLIP4.88□□□□□ -1.63
COL6A5-203ENST00000373157 TSEN2Q8NCE0 465 aaKnown RBP4.88□□□□□ -1.63
COL6A5-203ENST00000373157 PIK3R2O00459 728 aa4.88□□□□□ -1.63
COL6A5-203ENST00000373157 PPM1GO15355 546 aaPredicted RBP4.88□□□□□ -1.63
COL6A5-203ENST00000373157 CLSTN1O94985 981 aa4.88□□□□□ -1.63
COL6A5-203ENST00000373157 YBX3P16989 372 aaKnown RBP eCLIP4.88□□□□□ -1.63
COL6A5-203ENST00000373157 PSMD1Q99460 953 aa4.88□□□□□ -1.63
COL6A5-203ENST00000373157 TMPRSS4Q9NRS4 437 aa4.88□□□□□ -1.63
COL6A5-203ENST00000373157 C1QTNF9BB2RNN3 333 aa4.87□□□□□ -1.63
COL6A5-203ENST00000373157 STAU1O95793 577 aaKnown RBP4.87□□□□□ -1.63
COL6A5-203ENST00000373157 FSHRP23945 695 aa4.87□□□□□ -1.63
COL6A5-203ENST00000373157 ERVK-9P63128 1117 aa4.87□□□□□ -1.63
COL6A5-203ENST00000373157 CC2D2BQ6DHV5 1058 aa4.87□□□□□ -1.63
COL6A5-203ENST00000373157 Q6ZVU0 165 aa4.87□□□□□ -1.63
COL6A5-203ENST00000373157 ESF1Q9H501 851 aaKnown RBP4.87□□□□□ -1.63
COL6A5-203ENST00000373157 CYLDQ9NQC7 956 aa4.87□□□□□ -1.63
COL6A5-203ENST00000373157 ZNF358Q9NW07 568 aa4.87□□□□□ -1.63
COL6A5-203ENST00000373157 NSFL1CQ9UNZ2 370 aaKnown RBP4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms