RNA–Protein interactions for RNA: ENST00000370399.6

TGFBR3-202, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TGFBR3, Length 4,550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-202ENST00000370399 IFFO2Q5TF58 517 aa8.59□□□□□ -1.03
TGFBR3-202ENST00000370399 CLTCQ00610 1675 aaKnown RBP8.59□□□□□ -1.03
TGFBR3-202ENST00000370399 ARHGEF40Q8TER5 1519 aa8.59□□□□□ -1.03
TGFBR3-202ENST00000370399 IL2RBP14784 551 aa8.59□□□□□ -1.03
TGFBR3-202ENST00000370399 NUCB2P80303 420 aa8.59□□□□□ -1.03
TGFBR3-202ENST00000370399 AXIN2Q9Y2T1 843 aa8.59□□□□□ -1.03
TGFBR3-202ENST00000370399 QRICH2Q9H0J4 1663 aa8.59□□□□□ -1.03
TGFBR3-202ENST00000370399 RAB11FIP3O75154 756 aa8.59□□□□□ -1.03
TGFBR3-202ENST00000370399 ZNF853P0CG23 659 aa8.59□□□□□ -1.03
TGFBR3-202ENST00000370399 NPHP4O75161 1426 aaPredicted RBP8.59□□□□□ -1.03
TGFBR3-202ENST00000370399 ADGRB1O14514 1584 aa8.59□□□□□ -1.03
TGFBR3-202ENST00000370399 NCBP3Q53F19 620 aaKnown RBP8.59□□□□□ -1.03
TGFBR3-202ENST00000370399 PIK3C2BO00750 1634 aa8.58□□□□□ -1.04
TGFBR3-202ENST00000370399 DCAF5Q96JK2 942 aa8.58□□□□□ -1.04
TGFBR3-202ENST00000370399 JAKMIP1Q96N16 626 aaKnown RBP8.58□□□□□ -1.04
TGFBR3-202ENST00000370399 SNRKQ9NRH2 765 aa8.58□□□□□ -1.04
TGFBR3-202ENST00000370399 USP16Q9Y5T5 823 aa8.58□□□□□ -1.04
TGFBR3-202ENST00000370399 PRPF40AO75400 957 aaKnown RBP8.58□□□□□ -1.04
TGFBR3-202ENST00000370399 A1BGP04217 495 aa8.58□□□□□ -1.04
TGFBR3-202ENST00000370399 DNTTIP2Q5QJE6 756 aaKnown RBP8.58□□□□□ -1.04
TGFBR3-202ENST00000370399 LMBR1LQ6UX01 489 aa8.58□□□□□ -1.04
TGFBR3-202ENST00000370399 LINS1Q8NG48 757 aa8.58□□□□□ -1.04
TGFBR3-202ENST00000370399 DIP2BQ9P265 1576 aa8.58□□□□□ -1.04
TGFBR3-202ENST00000370399 ARHGEF10O15013 1369 aa8.58□□□□□ -1.04
TGFBR3-202ENST00000370399 PRPF40BQ6NWY9 871 aaKnown RBP8.58□□□□□ -1.04
TGFBR3-202ENST00000370399 ECHDC1Q9NTX5 307 aa8.58□□□□□ -1.04
TGFBR3-202ENST00000370399 VWDEQ8N2E2 1590 aa8.58□□□□□ -1.04
TGFBR3-202ENST00000370399 SETBP1Q9Y6X0 1596 aa8.58□□□□□ -1.04
TGFBR3-202ENST00000370399 CCDC158Q5M9N0 1113 aa8.58□□□□□ -1.04
TGFBR3-202ENST00000370399 MPHOSPH8Q99549 860 aa8.58□□□□□ -1.04
TGFBR3-202ENST00000370399 DDX21Q9NR30 783 aaKnown RBP eCLIP8.58□□□□□ -1.04
TGFBR3-202ENST00000370399 TRMT112Q9UI30 125 aaKnown RBP8.58□□□□□ -1.04
TGFBR3-202ENST00000370399 PROSER3Q2NL68 480 aa8.57□□□□□ -1.04
TGFBR3-202ENST00000370399 TTC39AQ5SRH9 613 aa8.57□□□□□ -1.04
TGFBR3-202ENST00000370399 USP44Q9H0E7 712 aa8.57□□□□□ -1.04
TGFBR3-202ENST00000370399 ABCC4O15439 1325 aa8.57□□□□□ -1.04
TGFBR3-202ENST00000370399 ZNF335Q9H4Z2 1342 aaPredicted RBP8.57□□□□□ -1.04
TGFBR3-202ENST00000370399 MCM4P33991 863 aa8.57□□□□□ -1.04
TGFBR3-202ENST00000370399 TBC1D2BQ9UPU7 963 aa8.57□□□□□ -1.04
TGFBR3-202ENST00000370399 MROH1Q8NDA8 1641 aa8.57□□□□□ -1.04
TGFBR3-202ENST00000370399 NRXN1Q9ULB1 1477 aa8.57□□□□□ -1.04
TGFBR3-202ENST00000370399 ADAMTS13Q76LX8 1427 aa8.57□□□□□ -1.04
TGFBR3-202ENST00000370399 GIGYF1O75420 1035 aaPredicted RBP8.57□□□□□ -1.04
TGFBR3-202ENST00000370399 CASTP20810 708 aaKnown RBP8.57□□□□□ -1.04
TGFBR3-202ENST00000370399 LRRFIP1Q32MZ4 808 aaKnown RBP8.57□□□□□ -1.04
TGFBR3-202ENST00000370399 PNPLA6Q8IY17 1366 aa8.56□□□□□ -1.04
TGFBR3-202ENST00000370399 UBAP1LF5GYI3 381 aa8.56□□□□□ -1.04
TGFBR3-202ENST00000370399 METTL24Q5JXM2 366 aa8.56□□□□□ -1.04
TGFBR3-202ENST00000370399 CAVIN1Q6NZI2 390 aaKnown RBP8.56□□□□□ -1.04
TGFBR3-202ENST00000370399 SIRT2Q8IXJ6 389 aa8.56□□□□□ -1.04
TGFBR3-202ENST00000370399 BICC1Q9H694 974 aaKnown RBP8.56□□□□□ -1.04
TGFBR3-202ENST00000370399 SLC52A2Q9HAB3 445 aa8.56□□□□□ -1.04
TGFBR3-202ENST00000370399 KIAA0232Q92628 1395 aa8.56□□□□□ -1.04
TGFBR3-202ENST00000370399 CPLX1O14810 134 aa8.56□□□□□ -1.04
TGFBR3-202ENST00000370399 TRDNQ13061 729 aa8.56□□□□□ -1.04
TGFBR3-202ENST00000370399 TCEANC2Q96MN5 208 aa8.56□□□□□ -1.04
TGFBR3-202ENST00000370399 CWC25Q9NXE8 425 aaPredicted RBP8.56□□□□□ -1.04
TGFBR3-202ENST00000370399 CYP46A1Q9Y6A2 500 aa8.56□□□□□ -1.04
TGFBR3-202ENST00000370399 G3V3G9 751 aa8.56□□□□□ -1.04
TGFBR3-202ENST00000370399 DTNBO60941 627 aa8.56□□□□□ -1.04
TGFBR3-202ENST00000370399 IDH1O75874 414 aaKnown RBP8.56□□□□□ -1.04
TGFBR3-202ENST00000370399 PTMSP20962 102 aa8.56□□□□□ -1.04
TGFBR3-202ENST00000370399 DCAF8Q5TAQ9 597 aa8.56□□□□□ -1.04
TGFBR3-202ENST00000370399 C8orf37Q96NL8 207 aa8.56□□□□□ -1.04
TGFBR3-202ENST00000370399 CPSF1Q10570 1443 aaKnown RBP8.56□□□□□ -1.04
TGFBR3-202ENST00000370399 MROH2AA6NES4 1674 aa8.55□□□□□ -1.04
TGFBR3-202ENST00000370399 PPFIA3O75145 1194 aa8.55□□□□□ -1.04
TGFBR3-202ENST00000370399 SF3A1Q15459 793 aaKnown RBP8.55□□□□□ -1.04
TGFBR3-202ENST00000370399 DDX46Q7L014 1031 aaKnown RBP8.55□□□□□ -1.04
TGFBR3-202ENST00000370399 RALYLQ86SE5 291 aaKnown RBP8.55□□□□□ -1.04
TGFBR3-202ENST00000370399 SYAP1Q96A49 352 aaPredicted RBP8.55□□□□□ -1.04
TGFBR3-202ENST00000370399 DNAJC5Q9H3Z4 198 aa8.55□□□□□ -1.04
TGFBR3-202ENST00000370399 BRPF3Q9ULD4 1205 aa8.55□□□□□ -1.04
TGFBR3-202ENST00000370399 FIBPO43427 364 aa8.55□□□□□ -1.04
TGFBR3-202ENST00000370399 IFIT5Q13325 482 aaKnown RBP8.55□□□□□ -1.04
TGFBR3-202ENST00000370399 RNF214Q8ND24 703 aa8.55□□□□□ -1.04
TGFBR3-202ENST00000370399 ALDH1L1O75891 902 aa8.55□□□□□ -1.04
TGFBR3-202ENST00000370399 SSFA2P28290 1259 aa8.55□□□□□ -1.04
TGFBR3-202ENST00000370399 LAMC1P11047 1609 aa8.55□□□□□ -1.04
TGFBR3-202ENST00000370399 HIP1O00291 1037 aa8.54□□□□□ -1.04
TGFBR3-202ENST00000370399 GOLIM4O00461 696 aa8.54□□□□□ -1.04
TGFBR3-202ENST00000370399 PHKG2P15735 406 aa8.54□□□□□ -1.04
TGFBR3-202ENST00000370399 PSMA5P28066 241 aa8.54□□□□□ -1.04
TGFBR3-202ENST00000370399 SKOR2Q2VWA4 1001 aaPredicted RBP8.54□□□□□ -1.04
TGFBR3-202ENST00000370399 RRP12Q5JTH9 1297 aaKnown RBP8.54□□□□□ -1.04
TGFBR3-202ENST00000370399 LDHAL6AQ6ZMR3 332 aa8.54□□□□□ -1.04
TGFBR3-202ENST00000370399 NAP1L5Q96NT1 182 aaPredicted RBP8.54□□□□□ -1.04
TGFBR3-202ENST00000370399 ERBB3P21860 1342 aa8.54□□□□□ -1.04
TGFBR3-202ENST00000370399 SOS1Q07889 1333 aaPredicted RBP8.54□□□□□ -1.04
TGFBR3-202ENST00000370399 CDK12Q9NYV4 1490 aaPredicted RBP8.54□□□□□ -1.04
TGFBR3-202ENST00000370399 CPS1P31327 1500 aa8.54□□□□□ -1.04
TGFBR3-202ENST00000370399 TULP1O00294 542 aaPredicted RBP8.54□□□□□ -1.04
TGFBR3-202ENST00000370399 IFIT1P09914 478 aaKnown RBP8.54□□□□□ -1.04
TGFBR3-202ENST00000370399 BLOC1S2Q6QNY1 142 aa8.54□□□□□ -1.04
TGFBR3-202ENST00000370399 ATP6V1DQ9Y5K8 247 aa8.54□□□□□ -1.04
TGFBR3-202ENST00000370399 RTL1A6NKG5 1358 aa8.54□□□□□ -1.04
TGFBR3-202ENST00000370399 PTPRUQ92729 1446 aa8.54□□□□□ -1.04
TGFBR3-202ENST00000370399 DDB1Q16531 1140 aa8.54□□□□□ -1.04
TGFBR3-202ENST00000370399 NFXL1Q6ZNB6 911 aa8.54□□□□□ -1.04
TGFBR3-202ENST00000370399 DRC7Q8IY82 874 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms