RNA–Protein interactions for RNA: ENST00000369236.5

GFRA1-203, Transcript of GDNF family receptor alpha 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GFRA1, Length 9,109 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1-203ENST00000369236 BUB1BO60566 1050 aaPredicted RBP13.85□□□□□ -0.19
GFRA1-203ENST00000369236 SETDB1Q15047 1291 aa13.85□□□□□ -0.19
GFRA1-203ENST00000369236 RPUSD2Q8IZ73 545 aaKnown RBP13.85□□□□□ -0.19
GFRA1-203ENST00000369236 RAB3IL1Q8TBN0 382 aa13.85□□□□□ -0.19
GFRA1-203ENST00000369236 WHAMMP3Q1A5X7 153 aa13.85□□□□□ -0.19
GFRA1-203ENST00000369236 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.85□□□□□ -0.19
GFRA1-203ENST00000369236 CTNNBL1Q8WYA6 563 aaPredicted RBP13.85□□□□□ -0.19
GFRA1-203ENST00000369236 ZNF365Q70YC5 407 aa13.85□□□□□ -0.19
GFRA1-203ENST00000369236 CHD1LQ86WJ1 897 aa13.85□□□□□ -0.19
GFRA1-203ENST00000369236 CCDC12Q8WUD4 166 aaPredicted RBP13.85□□□□□ -0.19
GFRA1-203ENST00000369236 CTNNA2P26232 953 aa13.85□□□□□ -0.19
GFRA1-203ENST00000369236 GNL3LQ9NVN8 582 aaKnown RBP13.85□□□□□ -0.19
GFRA1-203ENST00000369236 CASQ2O14958 399 aaPredicted RBP13.85□□□□□ -0.19
GFRA1-203ENST00000369236 CCDC38Q502W7 563 aa13.85□□□□□ -0.19
GFRA1-203ENST00000369236 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.85□□□□□ -0.19
GFRA1-203ENST00000369236 SELENOOQ9BVL4 669 aa13.85□□□□□ -0.19
GFRA1-203ENST00000369236 TTC12Q9H892 705 aaPredicted RBP13.85□□□□□ -0.19
GFRA1-203ENST00000369236 ATRIPQ8WXE1 791 aa13.85□□□□□ -0.19
GFRA1-203ENST00000369236 LTV1Q96GA3 475 aaPredicted RBP13.85□□□□□ -0.19
GFRA1-203ENST00000369236 PRPHP41219 470 aa13.84□□□□□ -0.19
GFRA1-203ENST00000369236 RIC3Q7Z5B4 369 aa13.84□□□□□ -0.19
GFRA1-203ENST00000369236 ARHGAP25P42331 645 aa13.84□□□□□ -0.19
GFRA1-203ENST00000369236 CEP128Q6ZU80 1094 aa13.84□□□□□ -0.19
GFRA1-203ENST00000369236 HDXQ7Z353 690 aa13.84□□□□□ -0.19
GFRA1-203ENST00000369236 ARFGAP2Q8N6H7 521 aa13.84□□□□□ -0.19
GFRA1-203ENST00000369236 FAM76AQ8TAV0 307 aa13.84□□□□□ -0.19
GFRA1-203ENST00000369236 TRIM7Q9C029 511 aa13.84□□□□□ -0.19
GFRA1-203ENST00000369236 MAP7D1Q3KQU3 841 aa13.84□□□□□ -0.19
GFRA1-203ENST00000369236 GABPB1Q06547 395 aaPredicted RBP13.84□□□□□ -0.19
GFRA1-203ENST00000369236 TRMT1Q9NXH9 659 aaKnown RBP13.84□□□□□ -0.19
GFRA1-203ENST00000369236 CIB2O75838 187 aa13.84□□□□□ -0.19
GFRA1-203ENST00000369236 MAP2K2P36507 400 aa13.84□□□□□ -0.19
GFRA1-203ENST00000369236 MCM6Q14566 821 aa13.84□□□□□ -0.19
GFRA1-203ENST00000369236 KIAA0753Q2KHM9 967 aa13.84□□□□□ -0.19
GFRA1-203ENST00000369236 PUS7Q96PZ0 661 aaKnown RBP13.84□□□□□ -0.19
GFRA1-203ENST00000369236 STK3Q13188 491 aa13.84□□□□□ -0.19
GFRA1-203ENST00000369236 WDR63Q8IWG1 891 aa13.84□□□□□ -0.19
GFRA1-203ENST00000369236 CASTP20810 708 aaKnown RBP13.83□□□□□ -0.19
GFRA1-203ENST00000369236 CTAGE1Q96RT6 745 aa13.83□□□□□ -0.19
GFRA1-203ENST00000369236 CCDC172P0C7W6 258 aa13.83□□□□□ -0.2
GFRA1-203ENST00000369236 CETN1Q12798 172 aa13.83□□□□□ -0.2
GFRA1-203ENST00000369236 CTAGE15A4D2H0 777 aa13.83□□□□□ -0.2
GFRA1-203ENST00000369236 CTAGE8P0CG41 777 aa13.83□□□□□ -0.2
GFRA1-203ENST00000369236 ZBTB16Q05516 673 aa13.83□□□□□ -0.2
GFRA1-203ENST00000369236 CTAGE6Q86UF2 777 aa13.83□□□□□ -0.2
GFRA1-203ENST00000369236 CTAGE4Q8IX94 777 aa13.83□□□□□ -0.2
GFRA1-203ENST00000369236 CCDC77Q9BR77 488 aa13.83□□□□□ -0.2
GFRA1-203ENST00000369236 NBPF8Q3BBV2 869 aa13.83□□□□□ -0.2
GFRA1-203ENST00000369236 TMC6Q7Z403 805 aa13.83□□□□□ -0.2
GFRA1-203ENST00000369236 UBE2HP62256 183 aa13.83□□□□□ -0.2
GFRA1-203ENST00000369236 KANK3Q6NY19 840 aa13.83□□□□□ -0.2
GFRA1-203ENST00000369236 PCK1P35558 622 aa13.82□□□□□ -0.2
GFRA1-203ENST00000369236 PLCD3Q8N3E9 789 aa13.82□□□□□ -0.2
GFRA1-203ENST00000369236 SLU7O95391 586 aaKnown RBP13.82□□□□□ -0.2
GFRA1-203ENST00000369236 CPLX4Q7Z7G2 160 aa13.82□□□□□ -0.2
GFRA1-203ENST00000369236 PHLDB2Q86SQ0 1253 aa13.82□□□□□ -0.2
GFRA1-203ENST00000369236 USP25Q9UHP3 1055 aa13.82□□□□□ -0.2
GFRA1-203ENST00000369236 SURF6O75683 361 aaKnown RBP13.82□□□□□ -0.2
GFRA1-203ENST00000369236 RAB34Q9BZG1 259 aa13.82□□□□□ -0.2
GFRA1-203ENST00000369236 FAM114A2Q9NRY5 505 aa13.82□□□□□ -0.2
GFRA1-203ENST00000369236 AP1ARQ63HQ0 302 aa13.82□□□□□ -0.2
GFRA1-203ENST00000369236 WASHC2CQ9Y4E1 1318 aa13.82□□□□□ -0.2
GFRA1-203ENST00000369236 GNG11P61952 73 aa13.82□□□□□ -0.2
GFRA1-203ENST00000369236 ZMAT2Q96NC0 199 aaKnown RBP13.82□□□□□ -0.2
GFRA1-203ENST00000369236 SOGA1O94964 1423 aa13.82□□□□□ -0.2
GFRA1-203ENST00000369236 ALDH3A1P30838 453 aa13.82□□□□□ -0.2
GFRA1-203ENST00000369236 KRBA2Q6ZNG9 492 aa13.82□□□□□ -0.2
GFRA1-203ENST00000369236 JAKMIP2Q96AA8 810 aa13.82□□□□□ -0.2
GFRA1-203ENST00000369236 VPS18Q9P253 973 aa13.82□□□□□ -0.2
GFRA1-203ENST00000369236 ATP5DP30049 168 aa13.81□□□□□ -0.2
GFRA1-203ENST00000369236 CFAP58Q5T655 872 aa13.81□□□□□ -0.2
GFRA1-203ENST00000369236 MAP7Q14244 749 aa13.81□□□□□ -0.2
GFRA1-203ENST00000369236 KLHL40Q2TBA0 621 aa13.81□□□□□ -0.2
GFRA1-203ENST00000369236 TTC39AQ5SRH9 613 aa13.81□□□□□ -0.2
GFRA1-203ENST00000369236 NOLC1Q14978 699 aaKnown RBP eCLIP13.81□□□□□ -0.2
GFRA1-203ENST00000369236 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.81□□□□□ -0.2
GFRA1-203ENST00000369236 VGFO15240 615 aaPredicted RBP13.81□□□□□ -0.2
GFRA1-203ENST00000369236 PPFIA2O75334 1257 aa13.81□□□□□ -0.2
GFRA1-203ENST00000369236 TPD52P55327 224 aaPredicted RBP13.81□□□□□ -0.2
GFRA1-203ENST00000369236 KLHL10Q6JEL2 608 aa13.81□□□□□ -0.2
GFRA1-203ENST00000369236 MATR3P43243 847 aaKnown RBP eCLIP13.81□□□□□ -0.2
GFRA1-203ENST00000369236 RBBP5Q15291 538 aaKnown RBP13.8□□□□□ -0.2
GFRA1-203ENST00000369236 ERCC6Q03468 1493 aa13.8□□□□□ -0.2
GFRA1-203ENST00000369236 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.8□□□□□ -0.2
GFRA1-203ENST00000369236 MVPQ14764 893 aaKnown RBP13.8□□□□□ -0.2
GFRA1-203ENST00000369236 ATP2A1O14983 1001 aa13.8□□□□□ -0.2
GFRA1-203ENST00000369236 ATP2C2O75185 946 aa13.8□□□□□ -0.2
GFRA1-203ENST00000369236 ACTN2P35609 894 aa13.8□□□□□ -0.2
GFRA1-203ENST00000369236 JAKMIP1Q96N16 626 aaKnown RBP13.8□□□□□ -0.2
GFRA1-203ENST00000369236 LRRC45Q96CN5 670 aa13.79□□□□□ -0.2
GFRA1-203ENST00000369236 SUPT6HQ7KZ85 1726 aaKnown RBP13.79□□□□□ -0.2
GFRA1-203ENST00000369236 CCDC196A0A1B0GTZ2 297 aa13.79□□□□□ -0.2
GFRA1-203ENST00000369236 LRSAM1Q6UWE0 723 aa13.79□□□□□ -0.2
GFRA1-203ENST00000369236 STAC3Q96MF2 364 aa13.79□□□□□ -0.2
GFRA1-203ENST00000369236 LUC7L3O95232 432 aaKnown RBP13.79□□□□□ -0.2
GFRA1-203ENST00000369236 U3KPZ7 1027 aaPredicted RBP13.79□□□□□ -0.2
GFRA1-203ENST00000369236 TDRD12Q587J7 1177 aaKnown RBP13.79□□□□□ -0.2
GFRA1-203ENST00000369236 RPGRIP1LQ68CZ1 1315 aa13.79□□□□□ -0.2
GFRA1-203ENST00000369236 PABPN1LA6NDY0 278 aaKnown RBP13.79□□□□□ -0.2
GFRA1-203ENST00000369236 NECTIN2Q92692 538 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms