RNA–Protein interactions for RNA: ENST00000362093.4

CKLF-204, Transcript of chemokine like factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKLF, Length 412 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-204ENST00000362093 RFC4P35249 363 aa22.27■■□□□ 1.16
CKLF-204ENST00000362093 LMOD3Q0VAK6 560 aa22.27■■□□□ 1.16
CKLF-204ENST00000362093 SYT17Q9BSW7 474 aa22.27■■□□□ 1.16
CKLF-204ENST00000362093 ZBTB1Q9Y2K1 713 aa22.27■■□□□ 1.16
CKLF-204ENST00000362093 SOS1Q07889 1333 aaPredicted RBP22.27■■□□□ 1.16
CKLF-204ENST00000362093 NEUROD2Q15784 382 aa22.26■■□□□ 1.15
CKLF-204ENST00000362093 TRIM35Q9UPQ4 493 aa22.26■■□□□ 1.15
CKLF-204ENST00000362093 USP16Q9Y5T5 823 aa22.26■■□□□ 1.15
CKLF-204ENST00000362093 SNRPA1P09661 255 aaKnown RBP22.25■■□□□ 1.15
CKLF-204ENST00000362093 GYS1P13807 737 aa22.24■■□□□ 1.15
CKLF-204ENST00000362093 PRAMEF22A3QJZ6 481 aa22.23■■□□□ 1.15
CKLF-204ENST00000362093 CANXP27824 592 aaKnown RBP22.23■■□□□ 1.15
CKLF-204ENST00000362093 NLGN1Q8N2Q7 840 aa22.23■■□□□ 1.15
CKLF-204ENST00000362093 MRS2Q9HD23 443 aa22.23■■□□□ 1.15
CKLF-204ENST00000362093 APAF1O14727 1248 aa22.22■■□□□ 1.15
CKLF-204ENST00000362093 A1BGP04217 495 aa22.22■■□□□ 1.15
CKLF-204ENST00000362093 EIF5P55010 431 aaKnown RBP22.22■■□□□ 1.15
CKLF-204ENST00000362093 EIF4A1P60842 406 aaKnown RBP22.22■■□□□ 1.15
CKLF-204ENST00000362093 BABAM1Q9NWV8 329 aa22.22■■□□□ 1.15
CKLF-204ENST00000362093 SRP68Q9UHB9 627 aaKnown RBP22.21■■□□□ 1.15
CKLF-204ENST00000362093 USP42Q9H9J4 1324 aaKnown RBP22.21■■□□□ 1.15
CKLF-204ENST00000362093 GIGYF1O75420 1035 aaPredicted RBP22.19■■□□□ 1.14
CKLF-204ENST00000362093 NARFQ9UHQ1 456 aa22.19■■□□□ 1.14
CKLF-204ENST00000362093 TSPYL4Q9UJ04 414 aa22.19■■□□□ 1.14
CKLF-204ENST00000362093 COL15A1P39059 1388 aa22.19■■□□□ 1.14
CKLF-204ENST00000362093 C4AP0C0L4 1744 aa22.18■■□□□ 1.14
CKLF-204ENST00000362093 CHL1O00533 1208 aa22.18■■□□□ 1.14
CKLF-204ENST00000362093 MMP10P09238 476 aa22.18■■□□□ 1.14
CKLF-204ENST00000362093 IL6STP40189 918 aaPredicted RBP22.18■■□□□ 1.14
CKLF-204ENST00000362093 FKBP8Q14318 412 aa22.18■■□□□ 1.14
CKLF-204ENST00000362093 KDM3BQ7LBC6 1761 aa22.17■■□□□ 1.14
CKLF-204ENST00000362093 ZPR1O75312 459 aa22.17■■□□□ 1.14
CKLF-204ENST00000362093 USPL1Q5W0Q7 1092 aa22.17■■□□□ 1.14
CKLF-204ENST00000362093 A0A087WZG4 1122 aa22.16■■□□□ 1.14
CKLF-204ENST00000362093 KLHL34Q8N239 644 aa22.16■■□□□ 1.14
CKLF-204ENST00000362093 CD2APQ9Y5K6 639 aa22.16■■□□□ 1.14
CKLF-204ENST00000362093 TM4SF1P30408 202 aa22.15■■□□□ 1.14
CKLF-204ENST00000362093 BCL2L12Q9HB09 334 aa22.15■■□□□ 1.14
CKLF-204ENST00000362093 NLGN2Q8NFZ4 835 aa22.14■■□□□ 1.13
CKLF-204ENST00000362093 NBPF26B4DH59 902 aa22.13■■□□□ 1.13
CKLF-204ENST00000362093 PIP4K2AP48426 406 aaPredicted RBP22.13■■□□□ 1.13
CKLF-204ENST00000362093 NBPF10Q6P3W6 841 aaKnown RBP22.13■■□□□ 1.13
CKLF-204ENST00000362093 NBPF15Q8N660 670 aa22.13■■□□□ 1.13
CKLF-204ENST00000362093 CFAP44Q96MT7 982 aa22.12■■□□□ 1.13
CKLF-204ENST00000362093 TBC1D2BQ9UPU7 963 aa22.12■■□□□ 1.13
CKLF-204ENST00000362093 PARP3Q9Y6F1 533 aa22.12■■□□□ 1.13
CKLF-204ENST00000362093 ZNF330Q9Y3S2 320 aaPredicted RBP22.11■■□□□ 1.13
CKLF-204ENST00000362093 LAS1LQ9Y4W2 734 aaKnown RBP22.11■■□□□ 1.13
CKLF-204ENST00000362093 ZNF853P0CG23 659 aa22.1■■□□□ 1.13
CKLF-204ENST00000362093 DDR1Q08345 913 aa22.1■■□□□ 1.13
CKLF-204ENST00000362093 IFFO2Q5TF58 517 aa22.1■■□□□ 1.13
CKLF-204ENST00000362093 DCAF8L1A6NGE4 600 aa22.09■■□□□ 1.13
CKLF-204ENST00000362093 POLRMTO00411 1230 aaKnown RBP22.09■■□□□ 1.13
CKLF-204ENST00000362093 NFIXQ14938 502 aa22.09■■□□□ 1.13
CKLF-204ENST00000362093 NCBP3Q53F19 620 aaKnown RBP22.09■■□□□ 1.13
CKLF-204ENST00000362093 NPM2Q86SE8 214 aaKnown RBP22.09■■□□□ 1.13
CKLF-204ENST00000362093 CAMTA2O94983 1202 aa22.08■■□□□ 1.13
CKLF-204ENST00000362093 CCDC27Q2M243 656 aa22.08■■□□□ 1.13
CKLF-204ENST00000362093 DZIP3Q86Y13 1208 aaKnown RBP22.08■■□□□ 1.13
CKLF-204ENST00000362093 CALD1Q05682 793 aaKnown RBP22.07■■□□□ 1.12
CKLF-204ENST00000362093 FAM9BQ8IZU0 186 aa22.06■■□□□ 1.12
CKLF-204ENST00000362093 MBIPQ9NS73 344 aa22.06■■□□□ 1.12
CKLF-204ENST00000362093 IFT57Q9NWB7 429 aa22.06■■□□□ 1.12
CKLF-204ENST00000362093 SENP3-EIF4A1A0A087X0R7 540 aa22.05■■□□□ 1.12
CKLF-204ENST00000362093 KRT24Q2M2I5 525 aa22.05■■□□□ 1.12
CKLF-204ENST00000362093 TBC1D9BQ66K14 1250 aa22.05■■□□□ 1.12
CKLF-204ENST00000362093 WWC1Q8IX03 1113 aa22.05■■□□□ 1.12
CKLF-204ENST00000362093 ERBB4Q15303 1308 aa22.05■■□□□ 1.12
CKLF-204ENST00000362093 LAMB4A4D0S4 1761 aa22.04■■□□□ 1.12
CKLF-204ENST00000362093 EIF2S2P20042 333 aaKnown RBP22.04■■□□□ 1.12
CKLF-204ENST00000362093 GNAI1P63096 354 aa22.04■■□□□ 1.12
CKLF-204ENST00000362093 RGL2O15211 777 aa22.03■■□□□ 1.12
CKLF-204ENST00000362093 TGFB2P61812 414 aa22.03■■□□□ 1.12
CKLF-204ENST00000362093 PDIA6Q15084 440 aa22.03■■□□□ 1.12
CKLF-204ENST00000362093 CLEC4GQ6UXB4 293 aa22.03■■□□□ 1.12
CKLF-204ENST00000362093 C10orf71Q711Q0 1435 aa22.03■■□□□ 1.12
CKLF-204ENST00000362093 SERPINB2P05120 415 aa22.02■■□□□ 1.12
CKLF-204ENST00000362093 GPR162Q16538 588 aa22.02■■□□□ 1.12
CKLF-204ENST00000362093 BICDL1Q6ZP65 573 aa22.02■■□□□ 1.12
CKLF-204ENST00000362093 HOXB7P09629 217 aa22.01■■□□□ 1.11
CKLF-204ENST00000362093 MYL6BP14649 208 aa22.01■■□□□ 1.11
CKLF-204ENST00000362093 LRP10Q7Z4F1 713 aa22.01■■□□□ 1.11
CKLF-204ENST00000362093 NGEFQ8N5V2 710 aa22.01■■□□□ 1.11
CKLF-204ENST00000362093 KIF13BQ9NQT8 1826 aa22.01■■□□□ 1.11
CKLF-204ENST00000362093 DUSP27Q5VZP5 1158 aa22■■□□□ 1.11
CKLF-204ENST00000362093 SCN7AQ01118 1682 aa21.99■■□□□ 1.11
CKLF-204ENST00000362093 ERVV-1B6SEH8 477 aa21.99■■□□□ 1.11
CKLF-204ENST00000362093 YBX3P16989 372 aaKnown RBP eCLIP21.99■■□□□ 1.111e-7■■■■□ 20.5
CKLF-204ENST00000362093 TTLL7Q6ZT98 887 aa21.99■■□□□ 1.11
CKLF-204ENST00000362093 SETDB2Q96T68 719 aa21.99■■□□□ 1.11
CKLF-204ENST00000362093 A0A0G2JLW4 131 aa21.98■■□□□ 1.11
CKLF-204ENST00000362093 CCER2I3L3R5 266 aa21.98■■□□□ 1.11
CKLF-204ENST00000362093 HLFQ16534 295 aa21.98■■□□□ 1.11
CKLF-204ENST00000362093 PROSER3Q2NL68 480 aa21.98■■□□□ 1.11
CKLF-204ENST00000362093 NECTIN2Q92692 538 aa21.98■■□□□ 1.11
CKLF-204ENST00000362093 ZNF652Q9Y2D9 606 aa21.98■■□□□ 1.11
CKLF-204ENST00000362093 PXDNLA1KZ92 1463 aa21.97■■□□□ 1.11
CKLF-204ENST00000362093 DPEP1P16444 411 aa21.97■■□□□ 1.11
CKLF-204ENST00000362093 KCNA3P22001 575 aa21.97■■□□□ 1.11
CKLF-204ENST00000362093 PELP1Q8IZL8 1130 aaKnown RBP21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms