RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 USP37Q86T82 979 aa15.22■□□□□ 0.03
SRGAP3-201ENST00000360413 OTUD6BQ8N6M0 293 aa15.22■□□□□ 0.03
SRGAP3-201ENST00000360413 ACTN2P35609 894 aa15.22■□□□□ 0.03
SRGAP3-201ENST00000360413 ZSWIM4Q9H7M6 989 aa15.22■□□□□ 0.03
SRGAP3-201ENST00000360413 CCDC171Q6TFL3 1326 aa15.21■□□□□ 0.03
SRGAP3-201ENST00000360413 SSBP05455 408 aaKnown RBP eCLIP15.21■□□□□ 0.03
SRGAP3-201ENST00000360413 IFI16Q16666 785 aaKnown RBP15.21■□□□□ 0.03
SRGAP3-201ENST00000360413 SETSIPP0DME0 302 aa15.21■□□□□ 0.03
SRGAP3-201ENST00000360413 CCDC121Q6ZUS5 278 aa15.21■□□□□ 0.03
SRGAP3-201ENST00000360413 SWAP70Q9UH65 585 aa15.21■□□□□ 0.03
SRGAP3-201ENST00000360413 KIF5BP33176 963 aa15.21■□□□□ 0.03
SRGAP3-201ENST00000360413 CUL5Q93034 780 aa15.21■□□□□ 0.03
SRGAP3-201ENST00000360413 PLEKHH1Q9ULM0 1364 aa15.21■□□□□ 0.03
SRGAP3-201ENST00000360413 MYOM3Q5VTT5 1437 aa15.21■□□□□ 0.03
SRGAP3-201ENST00000360413 TNPO1Q92973 898 aaKnown RBP15.21■□□□□ 0.02
SRGAP3-201ENST00000360413 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.2■□□□□ 0.02
SRGAP3-201ENST00000360413 CTAGE5O15320 804 aa15.2■□□□□ 0.02
SRGAP3-201ENST00000360413 NUP133Q8WUM0 1156 aa15.2■□□□□ 0.02
SRGAP3-201ENST00000360413 EBAG9O00559 213 aa15.2■□□□□ 0.02
SRGAP3-201ENST00000360413 BCAR3O75815 825 aa15.2■□□□□ 0.02
SRGAP3-201ENST00000360413 JADE2Q9NQC1 790 aa15.2■□□□□ 0.02
SRGAP3-201ENST00000360413 TATP17735 454 aaPredicted RBP15.2■□□□□ 0.02
SRGAP3-201ENST00000360413 PAXIP1Q6ZW49 1069 aaPredicted RBP15.2■□□□□ 0.02
SRGAP3-201ENST00000360413 SMAP1Q8IYB5 467 aaPredicted RBP15.2■□□□□ 0.02
SRGAP3-201ENST00000360413 YEATS4O95619 227 aa15.2■□□□□ 0.02
SRGAP3-201ENST00000360413 KIF3CO14782 793 aa15.2■□□□□ 0.02
SRGAP3-201ENST00000360413 CKAP2LQ8IYA6 745 aa15.2■□□□□ 0.02
SRGAP3-201ENST00000360413 EHBP1Q8NDI1 1231 aa15.2■□□□□ 0.02
SRGAP3-201ENST00000360413 CCDC12Q8WUD4 166 aaPredicted RBP15.2■□□□□ 0.02
SRGAP3-201ENST00000360413 ARID4AP29374 1257 aaPredicted RBP15.19■□□□□ 0.02
SRGAP3-201ENST00000360413 SCAND2PQ9GZW5 306 aaPredicted RBP15.19■□□□□ 0.02
SRGAP3-201ENST00000360413 U3KPZ7 1027 aaPredicted RBP15.19■□□□□ 0.02
SRGAP3-201ENST00000360413 ATRIPQ8WXE1 791 aa15.19■□□□□ 0.02
SRGAP3-201ENST00000360413 PAIP2Q9BPZ3 127 aaKnown RBP15.19■□□□□ 0.02
SRGAP3-201ENST00000360413 SPG7Q9UQ90 795 aa15.19■□□□□ 0.02
SRGAP3-201ENST00000360413 A0A1B0GUL7 405 aa15.19■□□□□ 0.02
SRGAP3-201ENST00000360413 ZNF428Q96B54 188 aa15.19■□□□□ 0.02
SRGAP3-201ENST00000360413 A0A1B0GUA9 196 aa15.19■□□□□ 0.02
SRGAP3-201ENST00000360413 MIPOL1Q8TD10 442 aa15.19■□□□□ 0.02
SRGAP3-201ENST00000360413 CCDC14Q49A88 953 aa15.19■□□□□ 0.02
SRGAP3-201ENST00000360413 CWC27Q6UX04 472 aaKnown RBP15.19■□□□□ 0.02
SRGAP3-201ENST00000360413 MXRA7P84157 204 aa15.18■□□□□ 0.02
SRGAP3-201ENST00000360413 ZSCAN29Q8IWY8 852 aaPredicted RBP15.18■□□□□ 0.02
SRGAP3-201ENST00000360413 GNG11P61952 73 aa15.18■□□□□ 0.02
SRGAP3-201ENST00000360413 ATF7IPQ6VMQ6 1270 aa15.18■□□□□ 0.02
SRGAP3-201ENST00000360413 CPLX3Q8WVH0 158 aa15.18■□□□□ 0.02
SRGAP3-201ENST00000360413 A0A1W2PRG0 241 aa15.18■□□□□ 0.02
SRGAP3-201ENST00000360413 ZFYP08048 801 aaPredicted RBP15.18■□□□□ 0.02
SRGAP3-201ENST00000360413 TRAF1Q13077 416 aa15.18■□□□□ 0.02
SRGAP3-201ENST00000360413 STX1AQ16623 288 aa15.18■□□□□ 0.02
SRGAP3-201ENST00000360413 VGLL3A8MV65 326 aa15.17■□□□□ 0.02
SRGAP3-201ENST00000360413 CNGA1P29973 690 aa15.17■□□□□ 0.02
SRGAP3-201ENST00000360413 MACROD2A1Z1Q3 448 aa15.17■□□□□ 0.02
SRGAP3-201ENST00000360413 NOL3O60936 208 aaKnown RBP15.17■□□□□ 0.02
SRGAP3-201ENST00000360413 LRRC27Q9C0I9 530 aa15.17■□□□□ 0.02
SRGAP3-201ENST00000360413 AKAP2Q9Y2D5 859 aa15.17■□□□□ 0.02
SRGAP3-201ENST00000360413 IGHMBP2P38935 993 aaKnown RBP15.17■□□□□ 0.02
SRGAP3-201ENST00000360413 NOLC1Q14978 699 aaKnown RBP eCLIP15.17■□□□□ 0.02
SRGAP3-201ENST00000360413 AMPD3Q01432 767 aa15.17■□□□□ 0.02
SRGAP3-201ENST00000360413 FERMT3Q86UX7 667 aa15.17■□□□□ 0.02
SRGAP3-201ENST00000360413 SSFA2P28290 1259 aa15.17■□□□□ 0.02
SRGAP3-201ENST00000360413 LRSAM1Q6UWE0 723 aa15.17■□□□□ 0.02
SRGAP3-201ENST00000360413 CAVIN2O95810 425 aa15.17■□□□□ 0.02
SRGAP3-201ENST00000360413 VPS18Q9P253 973 aa15.17■□□□□ 0.02
SRGAP3-201ENST00000360413 MVPQ14764 893 aaKnown RBP15.16■□□□□ 0.02
SRGAP3-201ENST00000360413 CCDC155Q8N6L0 562 aa15.16■□□□□ 0.02
SRGAP3-201ENST00000360413 CCDC114Q96M63 670 aa15.16■□□□□ 0.02
SRGAP3-201ENST00000360413 A0A087WZG4 1122 aa15.16■□□□□ 0.02
SRGAP3-201ENST00000360413 IGSF3O75054 1194 aa15.16■□□□□ 0.02
SRGAP3-201ENST00000360413 STMN4Q9H169 189 aaPredicted RBP15.16■□□□□ 0.02
SRGAP3-201ENST00000360413 MRPS9P82933 396 aaKnown RBP15.16■□□□□ 0.02
SRGAP3-201ENST00000360413 ABTB2Q8N961 1025 aa15.16■□□□□ 0.02
SRGAP3-201ENST00000360413 TOP2AP11388 1531 aaKnown RBP15.16■□□□□ 0.02
SRGAP3-201ENST00000360413 TDRD12Q587J7 1177 aaKnown RBP15.15■□□□□ 0.02
SRGAP3-201ENST00000360413 FAM114A2Q9NRY5 505 aa15.15■□□□□ 0.02
SRGAP3-201ENST00000360413 OPA1O60313 960 aa15.15■□□□□ 0.02
SRGAP3-201ENST00000360413 PRPHP41219 470 aa15.15■□□□□ 0.02
SRGAP3-201ENST00000360413 KRBA2Q6ZNG9 492 aa15.15■□□□□ 0.02
SRGAP3-201ENST00000360413 KIAA1524Q8TCG1 905 aa15.15■□□□□ 0.02
SRGAP3-201ENST00000360413 TUBB4BP68371 445 aa15.15■□□□□ 0.02
SRGAP3-201ENST00000360413 PPP1R1BQ9UD71 204 aaPredicted RBP15.15■□□□□ 0.02
SRGAP3-201ENST00000360413 UVSSAQ2YD98 709 aa15.15■□□□□ 0.02
SRGAP3-201ENST00000360413 ZSCAN23Q3MJ62 389 aa15.15■□□□□ 0.02
SRGAP3-201ENST00000360413 PPP1R14CQ8TAE6 165 aa15.15■□□□□ 0.02
SRGAP3-201ENST00000360413 ZNF830Q96NB3 372 aaPredicted RBP15.15■□□□□ 0.02
SRGAP3-201ENST00000360413 MKRN1Q9UHC7 482 aaKnown RBP15.15■□□□□ 0.02
SRGAP3-201ENST00000360413 CKAP4Q07065 602 aaKnown RBP15.15■□□□□ 0.02
SRGAP3-201ENST00000360413 PRPF4BQ13523 1007 aaKnown RBP15.15■□□□□ 0.02
SRGAP3-201ENST00000360413 EXOSC9Q06265 439 aaKnown RBP15.15■□□□□ 0.02
SRGAP3-201ENST00000360413 POLA1P09884 1462 aaPredicted RBP15.14■□□□□ 0.01
SRGAP3-201ENST00000360413 TCP11L2Q8N4U5 519 aa15.14■□□□□ 0.01
SRGAP3-201ENST00000360413 GOLIM4O00461 696 aa15.14■□□□□ 0.01
SRGAP3-201ENST00000360413 CCDC88BA6NC98 1476 aa15.14■□□□□ 0.01
SRGAP3-201ENST00000360413 KIF21BO75037 1637 aa15.14■□□□□ 0.01
SRGAP3-201ENST00000360413 OGFRQ9NZT2 677 aa15.14■□□□□ 0.01
SRGAP3-201ENST00000360413 CCDC82Q8N4S0 544 aa15.14■□□□□ 0.01
SRGAP3-201ENST00000360413 SUPT6HQ7KZ85 1726 aaKnown RBP15.14■□□□□ 0.01
SRGAP3-201ENST00000360413 NBPF11Q86T75 865 aa15.13■□□□□ 0.01
SRGAP3-201ENST00000360413 FMNL3Q8IVF7 1028 aa15.13■□□□□ 0.01
SRGAP3-201ENST00000360413 BAG4O95429 457 aaKnown RBP15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms