RNA–Protein interactions for RNA: ENST00000339276.5

SFN-201, Transcript of stratifin, humanhuman

APPRIS P1 BASIC

Gene SFN, Length 1,320 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFN-201ENST00000339276 RC3H1Q5TC82 1133 aaKnown RBP21.77■■□□□ 1.07
SFN-201ENST00000339276 SMIM5Q71RC9 77 aa21.77■■□□□ 1.07
SFN-201ENST00000339276 TSR2Q969E8 191 aaKnown RBP21.77■■□□□ 1.07
SFN-201ENST00000339276 TEX13AQ9BXU3 409 aaPredicted RBP21.77■■□□□ 1.07
SFN-201ENST00000339276 SPINK5Q9NQ38 1064 aaPredicted RBP21.77■■□□□ 1.07
SFN-201ENST00000339276 CASZ1Q86V15 1759 aa21.77■■□□□ 1.07
SFN-201ENST00000339276 PNPLA7Q6ZV29 1317 aa21.76■■□□□ 1.07
SFN-201ENST00000339276 INTS5Q6P9B9 1019 aaKnown RBP21.76■■□□□ 1.07
SFN-201ENST00000339276 CCDC87Q9NVE4 849 aa21.76■■□□□ 1.07
SFN-201ENST00000339276 USP16Q9Y5T5 823 aa21.76■■□□□ 1.07
SFN-201ENST00000339276 STARD3NLO95772 234 aa21.75■■□□□ 1.07
SFN-201ENST00000339276 HNRNPUQ00839 825 aaKnown RBP eCLIP21.75■■□□□ 1.07
SFN-201ENST00000339276 PDGFDQ9GZP0 370 aaPredicted RBP21.75■■□□□ 1.07
SFN-201ENST00000339276 ZBTB1Q9Y2K1 713 aa21.75■■□□□ 1.07
SFN-201ENST00000339276 PHF14O94880 888 aa21.74■■□□□ 1.07
SFN-201ENST00000339276 FANCIQ9NVI1 1328 aa21.73■■□□□ 1.07
SFN-201ENST00000339276 RPS6KA4O75676 772 aa21.72■■□□□ 1.07
SFN-201ENST00000339276 A1BGP04217 495 aa21.72■■□□□ 1.07
SFN-201ENST00000339276 RTCBQ9Y3I0 505 aaKnown RBP21.72■■□□□ 1.07
SFN-201ENST00000339276 C4AP0C0L4 1744 aa21.71■■□□□ 1.07
SFN-201ENST00000339276 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.71■■□□□ 1.07
SFN-201ENST00000339276 CANXP27824 592 aaKnown RBP21.71■■□□□ 1.07
SFN-201ENST00000339276 SSFA2P28290 1259 aa21.71■■□□□ 1.07
SFN-201ENST00000339276 PIP4K2AP48426 406 aaPredicted RBP21.71■■□□□ 1.07
SFN-201ENST00000339276 GOLGA2Q08379 1002 aa21.71■■□□□ 1.07
SFN-201ENST00000339276 COL23A1Q86Y22 540 aaPredicted RBP21.71■■□□□ 1.07
SFN-201ENST00000339276 C8orf58Q8NAV2 365 aa21.7■■□□□ 1.06
SFN-201ENST00000339276 SOS1Q07889 1333 aaPredicted RBP21.7■■□□□ 1.06
SFN-201ENST00000339276 DUSP27Q5VZP5 1158 aa21.69■■□□□ 1.06
SFN-201ENST00000339276 MYH16Q9H6N6 1097 aa21.69■■□□□ 1.06
SFN-201ENST00000339276 ELL2O00472 640 aaPredicted RBP21.68■■□□□ 1.06
SFN-201ENST00000339276 MSH5O43196 834 aa21.68■■□□□ 1.06
SFN-201ENST00000339276 EIF2S2P20042 333 aaKnown RBP21.68■■□□□ 1.06
SFN-201ENST00000339276 FLAD1Q8NFF5 587 aa21.68■■□□□ 1.06
SFN-201ENST00000339276 CDCA7LQ96GN5 454 aa21.68■■□□□ 1.06
SFN-201ENST00000339276 COL15A1P39059 1388 aa21.67■■□□□ 1.06
SFN-201ENST00000339276 NBPF26B4DH59 902 aa21.67■■□□□ 1.06
SFN-201ENST00000339276 NBPF10Q6P3W6 841 aaKnown RBP21.67■■□□□ 1.06
SFN-201ENST00000339276 NBPF15Q8N660 670 aa21.67■■□□□ 1.06
SFN-201ENST00000339276 TSPYL6Q8N831 410 aa21.67■■□□□ 1.06
SFN-201ENST00000339276 NECTIN2Q92692 538 aa21.67■■□□□ 1.06
SFN-201ENST00000339276 ARHGEF1Q92888 912 aaKnown RBP21.67■■□□□ 1.06
SFN-201ENST00000339276 E9PSI1 815 aa21.66■■□□□ 1.06
SFN-201ENST00000339276 HOXB7P09629 217 aa21.66■■□□□ 1.06
SFN-201ENST00000339276 ADRA2BP18089 450 aa21.66■■□□□ 1.06
SFN-201ENST00000339276 TRAPPC3LQ5T215 181 aa21.66■■□□□ 1.06
SFN-201ENST00000339276 ZNF330Q9Y3S2 320 aaPredicted RBP21.66■■□□□ 1.06
SFN-201ENST00000339276 IL6STP40189 918 aaPredicted RBP21.65■■□□□ 1.06
SFN-201ENST00000339276 EIF5P55010 431 aaKnown RBP21.65■■□□□ 1.06
SFN-201ENST00000339276 EXOSC9Q06265 439 aaKnown RBP21.65■■□□□ 1.06
SFN-201ENST00000339276 SLFN5Q08AF3 891 aa21.65■■□□□ 1.06
SFN-201ENST00000339276 ZBTB7AO95365 584 aa21.64■■□□□ 1.05
SFN-201ENST00000339276 HDGFL1Q5TGJ6 251 aa21.64■■□□□ 1.05
SFN-201ENST00000339276 ZBED9Q6R2W3 1325 aa21.63■■□□□ 1.05
SFN-201ENST00000339276 MYL6BP14649 208 aa21.62■■□□□ 1.05
SFN-201ENST00000339276 RFC4P35249 363 aa21.62■■□□□ 1.05
SFN-201ENST00000339276 PDIA6Q15084 440 aa21.62■■□□□ 1.05
SFN-201ENST00000339276 TWISTNBQ3B726 338 aaPredicted RBP21.62■■□□□ 1.05
SFN-201ENST00000339276 ERBB4Q15303 1308 aa21.62■■□□□ 1.05
SFN-201ENST00000339276 ANXA1P04083 346 aa21.61■■□□□ 1.05
SFN-201ENST00000339276 PROSER3Q2NL68 480 aa21.61■■□□□ 1.05
SFN-201ENST00000339276 SRP68Q9UHB9 627 aaKnown RBP21.61■■□□□ 1.05
SFN-201ENST00000339276 SCN7AQ01118 1682 aa21.61■■□□□ 1.05
SFN-201ENST00000339276 MSL1Q68DK7 614 aa21.6■■□□□ 1.05
SFN-201ENST00000339276 TRMT2AQ8IZ69 625 aaKnown RBP21.6■■□□□ 1.05
SFN-201ENST00000339276 SLC16A10Q8TF71 515 aa21.6■■□□□ 1.05
SFN-201ENST00000339276 CHPF2Q9P2E5 772 aa21.6■■□□□ 1.05
SFN-201ENST00000339276 USP42Q9H9J4 1324 aaKnown RBP21.6■■□□□ 1.05
SFN-201ENST00000339276 COL24A1Q17RW2 1714 aa21.59■■□□□ 1.05
SFN-201ENST00000339276 BCORQ6W2J9 1755 aa21.59■■□□□ 1.05
SFN-201ENST00000339276 LRP10Q7Z4F1 713 aa21.59■■□□□ 1.05
SFN-201ENST00000339276 MTFR1LQ9H019 292 aa21.59■■□□□ 1.05
SFN-201ENST00000339276 TBC1D2BQ9UPU7 963 aa21.59■■□□□ 1.05
SFN-201ENST00000339276 ATF5Q9Y2D1 282 aaPredicted RBP21.59■■□□□ 1.05
SFN-201ENST00000339276 A0A087WZG4 1122 aa21.58■■□□□ 1.05
SFN-201ENST00000339276 NPM2Q86SE8 214 aaKnown RBP21.58■■□□□ 1.05
SFN-201ENST00000339276 ARXQ96QS3 562 aa21.58■■□□□ 1.05
SFN-201ENST00000339276 DDX21Q9NR30 783 aaKnown RBP eCLIP21.58■■□□□ 1.05
SFN-201ENST00000339276 VAMP4O75379 141 aa21.57■■□□□ 1.04
SFN-201ENST00000339276 GYS1P13807 737 aa21.57■■□□□ 1.04
SFN-201ENST00000339276 USPL1Q5W0Q7 1092 aa21.57■■□□□ 1.04
SFN-201ENST00000339276 DZIP3Q86Y13 1208 aaKnown RBP21.57■■□□□ 1.04
SFN-201ENST00000339276 DBF4Q9UBU7 674 aaPredicted RBP21.57■■□□□ 1.04
SFN-201ENST00000339276 NARFQ9UHQ1 456 aa21.57■■□□□ 1.04
SFN-201ENST00000339276 TCERG1O14776 1098 aaKnown RBP21.56■■□□□ 1.04
SFN-201ENST00000339276 ZPR1O75312 459 aa21.56■■□□□ 1.04
SFN-201ENST00000339276 CCDC30Q5VVM6 783 aa21.55■■□□□ 1.04
SFN-201ENST00000339276 TTLL7Q6ZT98 887 aa21.55■■□□□ 1.04
SFN-201ENST00000339276 SPON1Q9HCB6 807 aa21.55■■□□□ 1.04
SFN-201ENST00000339276 LRP5O75197 1615 aa21.55■■□□□ 1.04
SFN-201ENST00000339276 CAMTA2O94983 1202 aa21.55■■□□□ 1.04
SFN-201ENST00000339276 BCL2L12Q9HB09 334 aa21.55■■□□□ 1.04
SFN-201ENST00000339276 PTGER2P43116 358 aa21.54■■□□□ 1.04
SFN-201ENST00000339276 FKBP8Q14318 412 aa21.54■■□□□ 1.04
SFN-201ENST00000339276 YTHDC1Q96MU7 727 aaKnown RBP21.54■■□□□ 1.04
SFN-201ENST00000339276 SGIP1Q9BQI5 828 aa21.54■■□□□ 1.04
SFN-201ENST00000339276 XAGE3Q8WTP9 111 aa21.53■■□□□ 1.04
SFN-201ENST00000339276 CHMP4AQ9BY43 222 aa21.53■■□□□ 1.04
SFN-201ENST00000339276 AIMP1Q12904 312 aaKnown RBP21.52■■□□□ 1.03
SFN-201ENST00000339276 KIF6Q6ZMV9 814 aa21.52■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms