RNA–Protein interactions for RNA: ENST00000332220.10

YBX1-202, Transcript of Y-box binding protein 1, humanhuman

TSL 5

Gene YBX1, Length 776 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1-202ENST00000332220 IFT57Q9NWB7 429 aa27.33■■□□□ 1.97
YBX1-202ENST00000332220 USP16Q9Y5T5 823 aa27.33■■□□□ 1.97
YBX1-202ENST00000332220 PHF14O94880 888 aa27.32■■□□□ 1.96
YBX1-202ENST00000332220 COL23A1Q86Y22 540 aaPredicted RBP27.32■■□□□ 1.96
YBX1-202ENST00000332220 TEX13AQ9BXU3 409 aaPredicted RBP27.32■■□□□ 1.96
YBX1-202ENST00000332220 MBIPQ9NS73 344 aa27.32■■□□□ 1.96
YBX1-202ENST00000332220 RPS6KA4O75676 772 aa27.31■■□□□ 1.96
YBX1-202ENST00000332220 GNAI1P63096 354 aa27.31■■□□□ 1.96
YBX1-202ENST00000332220 NGEFQ8N5V2 710 aa27.31■■□□□ 1.96
YBX1-202ENST00000332220 ZBTB1Q9Y2K1 713 aa27.31■■□□□ 1.96
YBX1-202ENST00000332220 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.3■■□□□ 1.96
YBX1-202ENST00000332220 GIGYF1O75420 1035 aaPredicted RBP27.3■■□□□ 1.96
YBX1-202ENST00000332220 STARD3NLO95772 234 aa27.3■■□□□ 1.96
YBX1-202ENST00000332220 SSFA2P28290 1259 aa27.3■■□□□ 1.96
YBX1-202ENST00000332220 KRT24Q2M2I5 525 aa27.3■■□□□ 1.96
YBX1-202ENST00000332220 RTCBQ9Y3I0 505 aaKnown RBP27.29■■□□□ 1.96
YBX1-202ENST00000332220 LRP5O75197 1615 aa27.28■■□□□ 1.96
YBX1-202ENST00000332220 IL16Q14005 1332 aa27.28■■□□□ 1.96
YBX1-202ENST00000332220 A1BGP04217 495 aa27.28■■□□□ 1.96
YBX1-202ENST00000332220 WDR63Q8IWG1 891 aa27.28■■□□□ 1.96
YBX1-202ENST00000332220 ZNF521Q96K83 1311 aa27.27■■□□□ 1.96
YBX1-202ENST00000332220 FLAD1Q8NFF5 587 aa27.27■■□□□ 1.96
YBX1-202ENST00000332220 SOS1Q07889 1333 aaPredicted RBP27.26■■□□□ 1.95
YBX1-202ENST00000332220 MSH5O43196 834 aa27.26■■□□□ 1.95
YBX1-202ENST00000332220 ZBTB7AO95365 584 aa27.26■■□□□ 1.95
YBX1-202ENST00000332220 CANXP27824 592 aaKnown RBP27.26■■□□□ 1.95
YBX1-202ENST00000332220 TSR2Q969E8 191 aaKnown RBP27.25■■□□□ 1.95
YBX1-202ENST00000332220 PIP4K2AP48426 406 aaPredicted RBP27.24■■□□□ 1.95
YBX1-202ENST00000332220 ARHGEF1Q92888 912 aaKnown RBP27.24■■□□□ 1.95
YBX1-202ENST00000332220 SPINK5Q9NQ38 1064 aaPredicted RBP27.24■■□□□ 1.95
YBX1-202ENST00000332220 BCORQ6W2J9 1755 aa27.24■■□□□ 1.95
YBX1-202ENST00000332220 TRAPPC3LQ5T215 181 aa27.23■■□□□ 1.95
YBX1-202ENST00000332220 COL15A1P39059 1388 aa27.22■■□□□ 1.95
YBX1-202ENST00000332220 SCN7AQ01118 1682 aa27.22■■□□□ 1.95
YBX1-202ENST00000332220 ADRA2BP18089 450 aa27.22■■□□□ 1.95
YBX1-202ENST00000332220 NBPF26B4DH59 902 aa27.21■■□□□ 1.95
YBX1-202ENST00000332220 NBPF10Q6P3W6 841 aaKnown RBP27.21■■□□□ 1.95
YBX1-202ENST00000332220 NBPF15Q8N660 670 aa27.21■■□□□ 1.95
YBX1-202ENST00000332220 SLC16A10Q8TF71 515 aa27.21■■□□□ 1.95
YBX1-202ENST00000332220 ATF5Q9Y2D1 282 aaPredicted RBP27.21■■□□□ 1.95
YBX1-202ENST00000332220 EIF5P55010 431 aaKnown RBP27.2■■□□□ 1.94
YBX1-202ENST00000332220 MTFR1LQ9H019 292 aa27.2■■□□□ 1.94
YBX1-202ENST00000332220 FANCIQ9NVI1 1328 aa27.19■■□□□ 1.94
YBX1-202ENST00000332220 CACNA1FO60840 1977 aa27.19■■□□□ 1.94
YBX1-202ENST00000332220 DUSP27Q5VZP5 1158 aa27.19■■□□□ 1.94
YBX1-202ENST00000332220 EIF2S2P20042 333 aaKnown RBP27.18■■□□□ 1.94
YBX1-202ENST00000332220 IL6STP40189 918 aaPredicted RBP27.18■■□□□ 1.94
YBX1-202ENST00000332220 C8orf58Q8NAV2 365 aa27.18■■□□□ 1.94
YBX1-202ENST00000332220 SRP68Q9UHB9 627 aaKnown RBP27.18■■□□□ 1.94
YBX1-202ENST00000332220 NUP98P52948 1817 aa27.18■■□□□ 1.94
YBX1-202ENST00000332220 RFC4P35249 363 aa27.17■■□□□ 1.94
YBX1-202ENST00000332220 MSL1Q68DK7 614 aa27.17■■□□□ 1.94
YBX1-202ENST00000332220 SPON1Q9HCB6 807 aa27.17■■□□□ 1.94
YBX1-202ENST00000332220 ZNF330Q9Y3S2 320 aaPredicted RBP27.17■■□□□ 1.94
YBX1-202ENST00000332220 ELL2O00472 640 aaPredicted RBP27.16■■□□□ 1.94
YBX1-202ENST00000332220 NECTIN2Q92692 538 aa27.16■■□□□ 1.94
YBX1-202ENST00000332220 USP42Q9H9J4 1324 aaKnown RBP27.16■■□□□ 1.94
YBX1-202ENST00000332220 HOXB7P09629 217 aa27.15■■□□□ 1.94
YBX1-202ENST00000332220 PTGER2P43116 358 aa27.15■■□□□ 1.94
YBX1-202ENST00000332220 TSPYL6Q8N831 410 aa27.15■■□□□ 1.94
YBX1-202ENST00000332220 SGIP1Q9BQI5 828 aa27.14■■□□□ 1.94
YBX1-202ENST00000332220 GYS1P13807 737 aa27.13■■□□□ 1.93
YBX1-202ENST00000332220 HNRNPUQ00839 825 aaKnown RBP eCLIP27.13■■□□□ 1.93
YBX1-202ENST00000332220 GOLGA2Q08379 1002 aa27.13■■□□□ 1.93
YBX1-202ENST00000332220 PDIA6Q15084 440 aa27.13■■□□□ 1.93
YBX1-202ENST00000332220 AFDNP55196 1824 aaKnown RBP27.13■■□□□ 1.93
YBX1-202ENST00000332220 ERBB4Q15303 1308 aa27.13■■□□□ 1.93
YBX1-202ENST00000332220 MYL6BP14649 208 aa27.12■■□□□ 1.93
YBX1-202ENST00000332220 HDGFL1Q5TGJ6 251 aa27.12■■□□□ 1.93
YBX1-202ENST00000332220 MYH16Q9H6N6 1097 aa27.12■■□□□ 1.93
YBX1-202ENST00000332220 NARFQ9UHQ1 456 aa27.12■■□□□ 1.93
YBX1-202ENST00000332220 SRCAPQ6ZRS2 3230 aa27.11■■□□□ 1.93
YBX1-202ENST00000332220 A0A087WZG4 1122 aa27.11■■□□□ 1.93
YBX1-202ENST00000332220 ANXA1P04083 346 aa27.11■■□□□ 1.93
YBX1-202ENST00000332220 PROSER3Q2NL68 480 aa27.11■■□□□ 1.93
YBX1-202ENST00000332220 USPL1Q5W0Q7 1092 aa27.11■■□□□ 1.93
YBX1-202ENST00000332220 CDCA7LQ96GN5 454 aa27.11■■□□□ 1.93
YBX1-202ENST00000332220 TBC1D2BQ9UPU7 963 aa27.11■■□□□ 1.93
YBX1-202ENST00000332220 EXOSC9Q06265 439 aaKnown RBP27.1■■□□□ 1.93
YBX1-202ENST00000332220 ZPR1O75312 459 aa27.09■■□□□ 1.93
YBX1-202ENST00000332220 SLFN5Q08AF3 891 aa27.09■■□□□ 1.93
YBX1-202ENST00000332220 LRP10Q7Z4F1 713 aa27.09■■□□□ 1.93
YBX1-202ENST00000332220 BCL2L12Q9HB09 334 aa27.09■■□□□ 1.93
YBX1-202ENST00000332220 TWISTNBQ3B726 338 aaPredicted RBP27.08■■□□□ 1.93
YBX1-202ENST00000332220 DZIP3Q86Y13 1208 aaKnown RBP27.08■■□□□ 1.93
YBX1-202ENST00000332220 ARXQ96QS3 562 aa27.08■■□□□ 1.93
YBX1-202ENST00000332220 CHPF2Q9P2E5 772 aa27.08■■□□□ 1.93
YBX1-202ENST00000332220 ANKRD36CQ5JPF3 1778 aa27.07■■□□□ 1.92
YBX1-202ENST00000332220 E9PSI1 815 aa27.07■■□□□ 1.92
YBX1-202ENST00000332220 FKBP8Q14318 412 aa27.07■■□□□ 1.92
YBX1-202ENST00000332220 NPM2Q86SE8 214 aaKnown RBP27.07■■□□□ 1.92
YBX1-202ENST00000332220 DDX21Q9NR30 783 aaKnown RBP eCLIP27.07■■□□□ 1.92
YBX1-202ENST00000332220 CAMTA2O94983 1202 aa27.06■■□□□ 1.92
YBX1-202ENST00000332220 ARFGEF2Q9Y6D5 1785 aa27.05■■□□□ 1.92
YBX1-202ENST00000332220 TTLL7Q6ZT98 887 aa27.05■■□□□ 1.92
YBX1-202ENST00000332220 NLGN1Q8N2Q7 840 aa27.05■■□□□ 1.92
YBX1-202ENST00000332220 POLD1P28340 1107 aa27.04■■□□□ 1.92
YBX1-202ENST00000332220 NRXN2Q9P2S2 1712 aa27.04■■□□□ 1.92
YBX1-202ENST00000332220 KIF13BQ9NQT8 1826 aa27.04■■□□□ 1.92
YBX1-202ENST00000332220 TRMT2AQ8IZ69 625 aaKnown RBP27.03■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 675.2 ms