RNA–Protein interactions for RNA: ENST00000320936.9

CIRBP-201, Transcript of cold inducible RNA binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIRBP, Length 1,328 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-201ENST00000320936 LAMB4A4D0S4 1761 aa24.5■■□□□ 1.51
CIRBP-201ENST00000320936 SENP3-EIF4A1A0A087X0R7 540 aa24.5■■□□□ 1.51
CIRBP-201ENST00000320936 TRIM35Q9UPQ4 493 aa24.5■■□□□ 1.51
CIRBP-201ENST00000320936 LAS1LQ9Y4W2 734 aaKnown RBP24.5■■□□□ 1.51
CIRBP-201ENST00000320936 ADRA2BP18089 450 aa24.49■■□□□ 1.51
CIRBP-201ENST00000320936 RFC4P35249 363 aa24.49■■□□□ 1.51
CIRBP-201ENST00000320936 PTGER2P43116 358 aa24.49■■□□□ 1.51
CIRBP-201ENST00000320936 INTS5Q6P9B9 1019 aaKnown RBP24.49■■□□□ 1.51
CIRBP-201ENST00000320936 COL24A1Q17RW2 1714 aa24.48■■□□□ 1.51
CIRBP-201ENST00000320936 DIEXFQ68CQ4 756 aaKnown RBP24.48■■□□□ 1.51
CIRBP-201ENST00000320936 SNRPA1P09661 255 aaKnown RBP24.47■■□□□ 1.51
CIRBP-201ENST00000320936 CANXP27824 592 aaKnown RBP24.47■■□□□ 1.51
CIRBP-201ENST00000320936 ZBTB1Q9Y2K1 713 aa24.47■■□□□ 1.51
CIRBP-201ENST00000320936 ARHGEF1Q92888 912 aaKnown RBP24.46■■□□□ 1.51
CIRBP-201ENST00000320936 ZNF330Q9Y3S2 320 aaPredicted RBP24.46■■□□□ 1.51
CIRBP-201ENST00000320936 COL15A1P39059 1388 aa24.45■■□□□ 1.5
CIRBP-201ENST00000320936 SOS1Q07889 1333 aaPredicted RBP24.45■■□□□ 1.5
CIRBP-201ENST00000320936 PRAMEF22A3QJZ6 481 aa24.44■■□□□ 1.5
CIRBP-201ENST00000320936 KLHL34Q8N239 644 aa24.44■■□□□ 1.5
CIRBP-201ENST00000320936 ARXQ96QS3 562 aa24.44■■□□□ 1.5
CIRBP-201ENST00000320936 CALD1Q05682 793 aaKnown RBP24.43■■□□□ 1.5
CIRBP-201ENST00000320936 NPM2Q86SE8 214 aaKnown RBP24.43■■□□□ 1.5
CIRBP-201ENST00000320936 SGIP1Q9BQI5 828 aa24.43■■□□□ 1.5
CIRBP-201ENST00000320936 EIF4A1P60842 406 aaKnown RBP24.42■■□□□ 1.5
CIRBP-201ENST00000320936 BABAM1Q9NWV8 329 aa24.42■■□□□ 1.5
CIRBP-201ENST00000320936 A1BGP04217 495 aa24.41■■□□□ 1.5
CIRBP-201ENST00000320936 USP16Q9Y5T5 823 aa24.41■■□□□ 1.5
CIRBP-201ENST00000320936 ZPR1O75312 459 aa24.4■■□□□ 1.5
CIRBP-201ENST00000320936 SRP68Q9UHB9 627 aaKnown RBP24.4■■□□□ 1.5
CIRBP-201ENST00000320936 PIP4K2AP48426 406 aaPredicted RBP24.39■■□□□ 1.5
CIRBP-201ENST00000320936 SALL2Q9Y467 1007 aaPredicted RBP24.39■■□□□ 1.5
CIRBP-201ENST00000320936 USP42Q9H9J4 1324 aaKnown RBP24.39■■□□□ 1.49
CIRBP-201ENST00000320936 GIGYF1O75420 1035 aaPredicted RBP24.38■■□□□ 1.49
CIRBP-201ENST00000320936 A0A087WZG4 1122 aa24.37■■□□□ 1.49
CIRBP-201ENST00000320936 CCER2I3L3R5 266 aa24.37■■□□□ 1.49
CIRBP-201ENST00000320936 FHDC1Q9C0D6 1143 aaPredicted RBP24.37■■□□□ 1.49
CIRBP-201ENST00000320936 CHL1O00533 1208 aa24.36■■□□□ 1.49
CIRBP-201ENST00000320936 GYS1P13807 737 aa24.36■■□□□ 1.49
CIRBP-201ENST00000320936 IL6STP40189 918 aaPredicted RBP24.36■■□□□ 1.49
CIRBP-201ENST00000320936 NLGN1Q8N2Q7 840 aa24.36■■□□□ 1.49
CIRBP-201ENST00000320936 CFAP44Q96MT7 982 aa24.36■■□□□ 1.49
CIRBP-201ENST00000320936 SCN7AQ01118 1682 aa24.36■■□□□ 1.49
CIRBP-201ENST00000320936 MMP10P09238 476 aa24.35■■□□□ 1.49
CIRBP-201ENST00000320936 EIF5P55010 431 aaKnown RBP24.35■■□□□ 1.49
CIRBP-201ENST00000320936 GNAI1P63096 354 aa24.35■■□□□ 1.49
CIRBP-201ENST00000320936 USPL1Q5W0Q7 1092 aa24.35■■□□□ 1.49
CIRBP-201ENST00000320936 IFT57Q9NWB7 429 aa24.35■■□□□ 1.49
CIRBP-201ENST00000320936 NARFQ9UHQ1 456 aa24.35■■□□□ 1.49
CIRBP-201ENST00000320936 CCDC27Q2M243 656 aa24.34■■□□□ 1.49
CIRBP-201ENST00000320936 MBIPQ9NS73 344 aa24.34■■□□□ 1.49
CIRBP-201ENST00000320936 EIF2S2P20042 333 aaKnown RBP24.33■■□□□ 1.48
CIRBP-201ENST00000320936 FKBP8Q14318 412 aa24.33■■□□□ 1.48
CIRBP-201ENST00000320936 WWC1Q8IX03 1113 aa24.33■■□□□ 1.48
CIRBP-201ENST00000320936 TBC1D2BQ9UPU7 963 aa24.33■■□□□ 1.48
CIRBP-201ENST00000320936 BCORQ6W2J9 1755 aa24.32■■□□□ 1.48
CIRBP-201ENST00000320936 KRT24Q2M2I5 525 aa24.32■■□□□ 1.48
CIRBP-201ENST00000320936 MIER1Q8N108 512 aa24.31■■□□□ 1.48
CIRBP-201ENST00000320936 PARP3Q9Y6F1 533 aa24.31■■□□□ 1.48
CIRBP-201ENST00000320936 NBPF26B4DH59 902 aa24.3■■□□□ 1.48
CIRBP-201ENST00000320936 MYL6BP14649 208 aa24.3■■□□□ 1.48
CIRBP-201ENST00000320936 NBPF10Q6P3W6 841 aaKnown RBP24.3■■□□□ 1.48
CIRBP-201ENST00000320936 DZIP3Q86Y13 1208 aaKnown RBP24.3■■□□□ 1.48
CIRBP-201ENST00000320936 NGEFQ8N5V2 710 aa24.3■■□□□ 1.48
CIRBP-201ENST00000320936 NBPF15Q8N660 670 aa24.3■■□□□ 1.48
CIRBP-201ENST00000320936 NECTIN2Q92692 538 aa24.3■■□□□ 1.48
CIRBP-201ENST00000320936 ZNF853P0CG23 659 aa24.29■■□□□ 1.48
CIRBP-201ENST00000320936 SYT17Q9BSW7 474 aa24.29■■□□□ 1.48
CIRBP-201ENST00000320936 NCBP3Q53F19 620 aaKnown RBP24.27■■□□□ 1.48
CIRBP-201ENST00000320936 ERBB4Q15303 1308 aa24.26■■□□□ 1.47
CIRBP-201ENST00000320936 BICDL1Q6ZP65 573 aa24.26■■□□□ 1.47
CIRBP-201ENST00000320936 TSR2Q969E8 191 aaKnown RBP24.26■■□□□ 1.47
CIRBP-201ENST00000320936 HDGFL1Q5TGJ6 251 aa24.25■■□□□ 1.47
CIRBP-201ENST00000320936 DUSP27Q5VZP5 1158 aa24.25■■□□□ 1.47
CIRBP-201ENST00000320936 BCL2L12Q9HB09 334 aa24.25■■□□□ 1.47
CIRBP-201ENST00000320936 IL16Q14005 1332 aa24.24■■□□□ 1.47
CIRBP-201ENST00000320936 DCAF8L1A6NGE4 600 aa24.24■■□□□ 1.47
CIRBP-201ENST00000320936 CAMTA2O94983 1202 aa24.24■■□□□ 1.47
CIRBP-201ENST00000320936 DDR1Q08345 913 aa24.24■■□□□ 1.47
CIRBP-201ENST00000320936 KIF6Q6ZMV9 814 aa24.24■■□□□ 1.47
CIRBP-201ENST00000320936 ZNF652Q9Y2D9 606 aa24.24■■□□□ 1.47
CIRBP-201ENST00000320936 AFDNP55196 1824 aaKnown RBP24.24■■□□□ 1.47
CIRBP-201ENST00000320936 ELL2O00472 640 aaPredicted RBP24.23■■□□□ 1.47
CIRBP-201ENST00000320936 HOXB7P09629 217 aa24.23■■□□□ 1.47
CIRBP-201ENST00000320936 NFIXQ14938 502 aa24.23■■□□□ 1.47
CIRBP-201ENST00000320936 WDR63Q8IWG1 891 aa24.23■■□□□ 1.47
CIRBP-201ENST00000320936 NLGN2Q8NFZ4 835 aa24.23■■□□□ 1.47
CIRBP-201ENST00000320936 CD2APQ9Y5K6 639 aa24.23■■□□□ 1.47
CIRBP-201ENST00000320936 ANXA1P04083 346 aa24.22■■□□□ 1.47
CIRBP-201ENST00000320936 KIF13BQ9NQT8 1826 aa24.22■■□□□ 1.47
CIRBP-201ENST00000320936 TBC1D9BQ66K14 1250 aa24.21■■□□□ 1.47
CIRBP-201ENST00000320936 C10orf71Q711Q0 1435 aa24.2■■□□□ 1.46
CIRBP-201ENST00000320936 POLRMTO00411 1230 aaKnown RBP24.2■■□□□ 1.46
CIRBP-201ENST00000320936 TM4SF1P30408 202 aa24.2■■□□□ 1.46
CIRBP-201ENST00000320936 PROSER3Q2NL68 480 aa24.2■■□□□ 1.46
CIRBP-201ENST00000320936 PELP1Q8IZL8 1130 aaKnown RBP24.2■■□□□ 1.46
CIRBP-201ENST00000320936 CHPF2Q9P2E5 772 aa24.2■■□□□ 1.46
CIRBP-201ENST00000320936 NPHP1O15259 732 aa24.19■■□□□ 1.46
CIRBP-201ENST00000320936 C8orf58Q8NAV2 365 aa24.19■■□□□ 1.46
CIRBP-201ENST00000320936 NUP98P52948 1817 aa24.19■■□□□ 1.46
CIRBP-201ENST00000320936 FANCIQ9NVI1 1328 aa24.19■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms