RNA–Protein interactions for RNA: ENST00000319223.8

LRRC42-201, Transcript of leucine rich repeat containing 42, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC42, Length 1,727 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC42-201ENST00000319223 TSPYL4Q9UJ04 414 aa21.77■■□□□ 1.08
LRRC42-201ENST00000319223 ZBTB1Q9Y2K1 713 aa21.77■■□□□ 1.08
LRRC42-201ENST00000319223 EIF4A1P60842 406 aaKnown RBP21.76■■□□□ 1.07
LRRC42-201ENST00000319223 ARHGEF1Q92888 912 aaKnown RBP21.76■■□□□ 1.07
LRRC42-201ENST00000319223 CCER2I3L3R5 266 aa21.75■■□□□ 1.07
LRRC42-201ENST00000319223 MSL1Q68DK7 614 aa21.75■■□□□ 1.07
LRRC42-201ENST00000319223 SGIP1Q9BQI5 828 aa21.75■■□□□ 1.07
LRRC42-201ENST00000319223 LAS1LQ9Y4W2 734 aaKnown RBP21.75■■□□□ 1.07
LRRC42-201ENST00000319223 CHL1O00533 1208 aa21.75■■□□□ 1.07
LRRC42-201ENST00000319223 SNRPA1P09661 255 aaKnown RBP21.75■■□□□ 1.07
LRRC42-201ENST00000319223 TRAPPC3LQ5T215 181 aa21.75■■□□□ 1.07
LRRC42-201ENST00000319223 TEX13AQ9BXU3 409 aaPredicted RBP21.75■■□□□ 1.07
LRRC42-201ENST00000319223 STARD3NLO95772 234 aa21.74■■□□□ 1.07
LRRC42-201ENST00000319223 A1BGP04217 495 aa21.74■■□□□ 1.07
LRRC42-201ENST00000319223 SALL2Q9Y467 1007 aaPredicted RBP21.74■■□□□ 1.07
LRRC42-201ENST00000319223 CANXP27824 592 aaKnown RBP21.73■■□□□ 1.07
LRRC42-201ENST00000319223 SOS1Q07889 1333 aaPredicted RBP21.73■■□□□ 1.07
LRRC42-201ENST00000319223 BABAM1Q9NWV8 329 aa21.72■■□□□ 1.07
LRRC42-201ENST00000319223 GIGYF1O75420 1035 aaPredicted RBP21.72■■□□□ 1.07
LRRC42-201ENST00000319223 PIP4K2AP48426 406 aaPredicted RBP21.72■■□□□ 1.07
LRRC42-201ENST00000319223 ZNF853P0CG23 659 aa21.71■■□□□ 1.07
LRRC42-201ENST00000319223 ADRA2BP18089 450 aa21.71■■□□□ 1.07
LRRC42-201ENST00000319223 KRT24Q2M2I5 525 aa21.71■■□□□ 1.07
LRRC42-201ENST00000319223 WWC1Q8IX03 1113 aa21.7■■□□□ 1.06
LRRC42-201ENST00000319223 CFAP44Q96MT7 982 aa21.7■■□□□ 1.06
LRRC42-201ENST00000319223 C4AP0C0L4 1744 aa21.69■■□□□ 1.06
LRRC42-201ENST00000319223 COL24A1Q17RW2 1714 aa21.69■■□□□ 1.06
LRRC42-201ENST00000319223 RFC4P35249 363 aa21.69■■□□□ 1.06
LRRC42-201ENST00000319223 CCDC27Q2M243 656 aa21.69■■□□□ 1.06
LRRC42-201ENST00000319223 SRP68Q9UHB9 627 aaKnown RBP21.69■■□□□ 1.06
LRRC42-201ENST00000319223 EIF5P55010 431 aaKnown RBP21.69■■□□□ 1.06
LRRC42-201ENST00000319223 MBIPQ9NS73 344 aa21.69■■□□□ 1.06
LRRC42-201ENST00000319223 COL15A1P39059 1388 aa21.67■■□□□ 1.06
LRRC42-201ENST00000319223 NBPF26B4DH59 902 aa21.67■■□□□ 1.06
LRRC42-201ENST00000319223 GYS1P13807 737 aa21.67■■□□□ 1.06
LRRC42-201ENST00000319223 NBPF10Q6P3W6 841 aaKnown RBP21.67■■□□□ 1.06
LRRC42-201ENST00000319223 NBPF15Q8N660 670 aa21.67■■□□□ 1.06
LRRC42-201ENST00000319223 IFT57Q9NWB7 429 aa21.66■■□□□ 1.06
LRRC42-201ENST00000319223 USP42Q9H9J4 1324 aaKnown RBP21.66■■□□□ 1.06
LRRC42-201ENST00000319223 NCBP3Q53F19 620 aaKnown RBP21.66■■□□□ 1.06
LRRC42-201ENST00000319223 PPP1R1BQ9UD71 204 aaPredicted RBP21.66■■□□□ 1.06
LRRC42-201ENST00000319223 ZNF330Q9Y3S2 320 aaPredicted RBP21.66■■□□□ 1.06
LRRC42-201ENST00000319223 IL6STP40189 918 aaPredicted RBP21.65■■□□□ 1.06
LRRC42-201ENST00000319223 ARXQ96QS3 562 aa21.65■■□□□ 1.06
LRRC42-201ENST00000319223 GNAI1P63096 354 aa21.64■■□□□ 1.06
LRRC42-201ENST00000319223 CALD1Q05682 793 aaKnown RBP21.64■■□□□ 1.06
LRRC42-201ENST00000319223 USPL1Q5W0Q7 1092 aa21.64■■□□□ 1.06
LRRC42-201ENST00000319223 LAMB4A4D0S4 1761 aa21.64■■□□□ 1.05
LRRC42-201ENST00000319223 POLD1P28340 1107 aa21.63■■□□□ 1.05
LRRC42-201ENST00000319223 FKBP8Q14318 412 aa21.63■■□□□ 1.05
LRRC42-201ENST00000319223 NARFQ9UHQ1 456 aa21.63■■□□□ 1.05
LRRC42-201ENST00000319223 TBC1D2BQ9UPU7 963 aa21.63■■□□□ 1.05
LRRC42-201ENST00000319223 EIF2S2P20042 333 aaKnown RBP21.62■■□□□ 1.05
LRRC42-201ENST00000319223 TSR2Q969E8 191 aaKnown RBP21.62■■□□□ 1.05
LRRC42-201ENST00000319223 BCL2L12Q9HB09 334 aa21.62■■□□□ 1.05
LRRC42-201ENST00000319223 NECTIN2Q92692 538 aa21.61■■□□□ 1.05
LRRC42-201ENST00000319223 ZPR1O75312 459 aa21.6■■□□□ 1.05
LRRC42-201ENST00000319223 MMP10P09238 476 aa21.6■■□□□ 1.05
LRRC42-201ENST00000319223 NLGN1Q8N2Q7 840 aa21.6■■□□□ 1.05
LRRC42-201ENST00000319223 FHDC1Q9C0D6 1143 aaPredicted RBP21.6■■□□□ 1.05
LRRC42-201ENST00000319223 SPINK5Q9NQ38 1064 aaPredicted RBP21.6■■□□□ 1.05
LRRC42-201ENST00000319223 A0A087WZG4 1122 aa21.59■■□□□ 1.05
LRRC42-201ENST00000319223 ELL2O00472 640 aaPredicted RBP21.58■■□□□ 1.05
LRRC42-201ENST00000319223 MYL6BP14649 208 aa21.58■■□□□ 1.05
LRRC42-201ENST00000319223 PDIA6Q15084 440 aa21.58■■□□□ 1.05
LRRC42-201ENST00000319223 DUSP27Q5VZP5 1158 aa21.58■■□□□ 1.05
LRRC42-201ENST00000319223 WDR63Q8IWG1 891 aa21.58■■□□□ 1.05
LRRC42-201ENST00000319223 NGEFQ8N5V2 710 aa21.58■■□□□ 1.05
LRRC42-201ENST00000319223 C8orf58Q8NAV2 365 aa21.58■■□□□ 1.05
LRRC42-201ENST00000319223 IL16Q14005 1332 aa21.58■■□□□ 1.04
LRRC42-201ENST00000319223 ANXA1P04083 346 aa21.58■■□□□ 1.04
LRRC42-201ENST00000319223 PROSER3Q2NL68 480 aa21.58■■□□□ 1.04
LRRC42-201ENST00000319223 DZIP3Q86Y13 1208 aaKnown RBP21.58■■□□□ 1.04
LRRC42-201ENST00000319223 ZNF521Q96K83 1311 aa21.57■■□□□ 1.04
LRRC42-201ENST00000319223 CAMTA2O94983 1202 aa21.57■■□□□ 1.04
LRRC42-201ENST00000319223 KLHL34Q8N239 644 aa21.57■■□□□ 1.04
LRRC42-201ENST00000319223 TM4SF1P30408 202 aa21.56■■□□□ 1.04
LRRC42-201ENST00000319223 DDR1Q08345 913 aa21.56■■□□□ 1.04
LRRC42-201ENST00000319223 LRP10Q7Z4F1 713 aa21.56■■□□□ 1.04
LRRC42-201ENST00000319223 TSPYL6Q8N831 410 aa21.56■■□□□ 1.04
LRRC42-201ENST00000319223 SYT17Q9BSW7 474 aa21.56■■□□□ 1.04
LRRC42-201ENST00000319223 NPM2Q86SE8 214 aaKnown RBP21.55■■□□□ 1.04
LRRC42-201ENST00000319223 NFIXQ14938 502 aa21.55■■□□□ 1.04
LRRC42-201ENST00000319223 HDGFL1Q5TGJ6 251 aa21.54■■□□□ 1.04
LRRC42-201ENST00000319223 TTLL7Q6ZT98 887 aa21.54■■□□□ 1.04
LRRC42-201ENST00000319223 ERBB4Q15303 1308 aa21.54■■□□□ 1.04
LRRC42-201ENST00000319223 FANCIQ9NVI1 1328 aa21.54■■□□□ 1.04
LRRC42-201ENST00000319223 SCN7AQ01118 1682 aa21.53■■□□□ 1.04
LRRC42-201ENST00000319223 HOXB7P09629 217 aa21.53■■□□□ 1.04
LRRC42-201ENST00000319223 TBC1D9BQ66K14 1250 aa21.53■■□□□ 1.04
LRRC42-201ENST00000319223 BICDL1Q6ZP65 573 aa21.52■■□□□ 1.04
LRRC42-201ENST00000319223 CHPF2Q9P2E5 772 aa21.52■■□□□ 1.04
LRRC42-201ENST00000319223 POLRMTO00411 1230 aaKnown RBP21.52■■□□□ 1.03
LRRC42-201ENST00000319223 NLGN2Q8NFZ4 835 aa21.52■■□□□ 1.03
LRRC42-201ENST00000319223 PARP3Q9Y6F1 533 aa21.52■■□□□ 1.03
LRRC42-201ENST00000319223 HLFQ16534 295 aa21.51■■□□□ 1.03
LRRC42-201ENST00000319223 BCORQ6W2J9 1755 aa21.51■■□□□ 1.03
LRRC42-201ENST00000319223 DDX21Q9NR30 783 aaKnown RBP eCLIP21.5■■□□□ 1.03
LRRC42-201ENST00000319223 EXOSC9Q06265 439 aaKnown RBP21.48■■□□□ 1.03
LRRC42-201ENST00000319223 COPS6Q7L5N1 327 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms