RNA–Protein interactions for RNA: ENST00000310190.8

CCS-201, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5 BASIC

Gene CCS, Length 942 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-201ENST00000310190 ZNF853P0CG23 659 aa23.35■■□□□ 1.33
CCS-201ENST00000310190 CALD1Q05682 793 aaKnown RBP23.35■■□□□ 1.33
CCS-201ENST00000310190 TRAPPC3LQ5T215 181 aa23.35■■□□□ 1.33
CCS-201ENST00000310190 SOS1Q07889 1333 aaPredicted RBP23.34■■□□□ 1.33
CCS-201ENST00000310190 C4AP0C0L4 1744 aa23.34■■□□□ 1.33
CCS-201ENST00000310190 ZBTB7AO95365 584 aa23.34■■□□□ 1.33
CCS-201ENST00000310190 CFAP44Q96MT7 982 aa23.34■■□□□ 1.33
CCS-201ENST00000310190 LAMB4A4D0S4 1761 aa23.34■■□□□ 1.33
CCS-201ENST00000310190 NEUROD2Q15784 382 aa23.33■■□□□ 1.33
CCS-201ENST00000310190 GIGYF1O75420 1035 aaPredicted RBP23.32■■□□□ 1.32
CCS-201ENST00000310190 EIF5P55010 431 aaKnown RBP23.32■■□□□ 1.32
CCS-201ENST00000310190 DIEXFQ68CQ4 756 aaKnown RBP23.32■■□□□ 1.32
CCS-201ENST00000310190 ARHGEF1Q92888 912 aaKnown RBP23.32■■□□□ 1.32
CCS-201ENST00000310190 MIS18AQ9NYP9 233 aa23.31■■□□□ 1.32
CCS-201ENST00000310190 TSPYL4Q9UJ04 414 aa23.31■■□□□ 1.32
CCS-201ENST00000310190 IL6STP40189 918 aaPredicted RBP23.3■■□□□ 1.32
CCS-201ENST00000310190 IFT57Q9NWB7 429 aa23.3■■□□□ 1.32
CCS-201ENST00000310190 ZBTB1Q9Y2K1 713 aa23.3■■□□□ 1.32
CCS-201ENST00000310190 USP16Q9Y5T5 823 aa23.3■■□□□ 1.32
CCS-201ENST00000310190 ATF5Q9Y2D1 282 aaPredicted RBP23.29■■□□□ 1.32
CCS-201ENST00000310190 IL16Q14005 1332 aa23.29■■□□□ 1.32
CCS-201ENST00000310190 RGL2O15211 777 aa23.28■■□□□ 1.32
CCS-201ENST00000310190 ERBB4Q15303 1308 aa23.28■■□□□ 1.32
CCS-201ENST00000310190 USP42Q9H9J4 1324 aaKnown RBP23.28■■□□□ 1.32
CCS-201ENST00000310190 COL15A1P39059 1388 aa23.27■■□□□ 1.32
CCS-201ENST00000310190 A0A087WZG4 1122 aa23.27■■□□□ 1.32
CCS-201ENST00000310190 PHF14O94880 888 aa23.27■■□□□ 1.32
CCS-201ENST00000310190 HOXB7P09629 217 aa23.27■■□□□ 1.32
CCS-201ENST00000310190 GNAI1P63096 354 aa23.27■■□□□ 1.32
CCS-201ENST00000310190 WWC1Q8IX03 1113 aa23.27■■□□□ 1.32
CCS-201ENST00000310190 NLGN1Q8N2Q7 840 aa23.27■■□□□ 1.32
CCS-201ENST00000310190 GYS1P13807 737 aa23.26■■□□□ 1.31
CCS-201ENST00000310190 POLD1P28340 1107 aa23.26■■□□□ 1.31
CCS-201ENST00000310190 RFC4P35249 363 aa23.26■■□□□ 1.31
CCS-201ENST00000310190 NARFQ9UHQ1 456 aa23.26■■□□□ 1.31
CCS-201ENST00000310190 SMIM5Q71RC9 77 aa23.25■■□□□ 1.31
CCS-201ENST00000310190 PRAMEF22A3QJZ6 481 aa23.24■■□□□ 1.31
CCS-201ENST00000310190 MSH5O43196 834 aa23.24■■□□□ 1.31
CCS-201ENST00000310190 WDR63Q8IWG1 891 aa23.24■■□□□ 1.31
CCS-201ENST00000310190 FAM9BQ8IZU0 186 aa23.24■■□□□ 1.31
CCS-201ENST00000310190 ARXQ96QS3 562 aa23.24■■□□□ 1.31
CCS-201ENST00000310190 A1BGP04217 495 aa23.23■■□□□ 1.31
CCS-201ENST00000310190 NBPF26B4DH59 902 aa23.21■■□□□ 1.31
CCS-201ENST00000310190 NBPF10Q6P3W6 841 aaKnown RBP23.21■■□□□ 1.31
CCS-201ENST00000310190 NBPF15Q8N660 670 aa23.21■■□□□ 1.31
CCS-201ENST00000310190 MBIPQ9NS73 344 aa23.21■■□□□ 1.31
CCS-201ENST00000310190 SCN7AQ01118 1682 aa23.21■■□□□ 1.31
CCS-201ENST00000310190 ZNF521Q96K83 1311 aa23.2■■□□□ 1.3
CCS-201ENST00000310190 CANXP27824 592 aaKnown RBP23.2■■□□□ 1.3
CCS-201ENST00000310190 BCORQ6W2J9 1755 aa23.19■■□□□ 1.3
CCS-201ENST00000310190 ZPR1O75312 459 aa23.19■■□□□ 1.3
CCS-201ENST00000310190 PPP1R1BQ9UD71 204 aaPredicted RBP23.19■■□□□ 1.3
CCS-201ENST00000310190 KIF13BQ9NQT8 1826 aa23.18■■□□□ 1.3
CCS-201ENST00000310190 TM4SF1P30408 202 aa23.18■■□□□ 1.3
CCS-201ENST00000310190 CLEC4GQ6UXB4 293 aa23.17■■□□□ 1.3
CCS-201ENST00000310190 LRP10Q7Z4F1 713 aa23.17■■□□□ 1.3
CCS-201ENST00000310190 MIER1Q8N108 512 aa23.17■■□□□ 1.3
CCS-201ENST00000310190 BCL2L12Q9HB09 334 aa23.17■■□□□ 1.3
CCS-201ENST00000310190 SRP68Q9UHB9 627 aaKnown RBP23.17■■□□□ 1.3
CCS-201ENST00000310190 PDIA6Q15084 440 aa23.16■■□□□ 1.3
CCS-201ENST00000310190 MSL1Q68DK7 614 aa23.16■■□□□ 1.3
CCS-201ENST00000310190 CHMP4AQ9BY43 222 aa23.16■■□□□ 1.3
CCS-201ENST00000310190 CD2APQ9Y5K6 639 aa23.16■■□□□ 1.3
CCS-201ENST00000310190 NRXN2Q9P2S2 1712 aa23.16■■□□□ 1.3
CCS-201ENST00000310190 CAMTA2O94983 1202 aa23.15■■□□□ 1.3
CCS-201ENST00000310190 FKBP8Q14318 412 aa23.15■■□□□ 1.3
CCS-201ENST00000310190 USPL1Q5W0Q7 1092 aa23.15■■□□□ 1.3
CCS-201ENST00000310190 SYT17Q9BSW7 474 aa23.15■■□□□ 1.3
CCS-201ENST00000310190 MMP10P09238 476 aa23.14■■□□□ 1.29
CCS-201ENST00000310190 FHDC1Q9C0D6 1143 aaPredicted RBP23.14■■□□□ 1.29
CCS-201ENST00000310190 LAS1LQ9Y4W2 734 aaKnown RBP23.14■■□□□ 1.29
CCS-201ENST00000310190 ERVV-1B6SEH8 477 aa23.13■■□□□ 1.29
CCS-201ENST00000310190 NPM2Q86SE8 214 aaKnown RBP23.13■■□□□ 1.29
CCS-201ENST00000310190 DUSP27Q5VZP5 1158 aa23.12■■□□□ 1.29
CCS-201ENST00000310190 DZIP3Q86Y13 1208 aaKnown RBP23.12■■□□□ 1.29
CCS-201ENST00000310190 DDX21Q9NR30 783 aaKnown RBP eCLIP23.12■■□□□ 1.29
CCS-201ENST00000310190 KRT24Q2M2I5 525 aa23.11■■□□□ 1.29
CCS-201ENST00000310190 C10orf71Q711Q0 1435 aa23.1■■□□□ 1.29
CCS-201ENST00000310190 POLRMTO00411 1230 aaKnown RBP23.1■■□□□ 1.29
CCS-201ENST00000310190 TBC1D2BQ9UPU7 963 aa23.1■■□□□ 1.29
CCS-201ENST00000310190 DDR1Q08345 913 aa23.09■■□□□ 1.29
CCS-201ENST00000310190 NFIXQ14938 502 aa23.09■■□□□ 1.29
CCS-201ENST00000310190 PARP3Q9Y6F1 533 aa23.09■■□□□ 1.29
CCS-201ENST00000310190 AFDNP55196 1824 aaKnown RBP23.09■■□□□ 1.29
CCS-201ENST00000310190 CACNA1FO60840 1977 aa23.09■■□□□ 1.29
CCS-201ENST00000310190 C8orf58Q8NAV2 365 aa23.08■■□□□ 1.29
CCS-201ENST00000310190 DBF4Q9UBU7 674 aaPredicted RBP23.08■■□□□ 1.29
CCS-201ENST00000310190 ZNF652Q9Y2D9 606 aa23.08■■□□□ 1.29
CCS-201ENST00000310190 NUP98P52948 1817 aa23.08■■□□□ 1.28
CCS-201ENST00000310190 EIF2S2P20042 333 aaKnown RBP23.07■■□□□ 1.28
CCS-201ENST00000310190 PIP4K2AP48426 406 aaPredicted RBP23.07■■□□□ 1.28
CCS-201ENST00000310190 HDGFL1Q5TGJ6 251 aa23.07■■□□□ 1.28
CCS-201ENST00000310190 MAP3K15Q6ZN16 1313 aa23.07■■□□□ 1.28
CCS-201ENST00000310190 FANCIQ9NVI1 1328 aa23.07■■□□□ 1.28
CCS-201ENST00000310190 KIAA1551Q9HCM1 1747 aa23.06■■□□□ 1.28
CCS-201ENST00000310190 MYH16Q9H6N6 1097 aa23.06■■□□□ 1.28
CCS-201ENST00000310190 ATP10DQ9P241 1426 aa23.06■■□□□ 1.28
CCS-201ENST00000310190 CARMIL3Q8ND23 1372 aa23.05■■□□□ 1.28
CCS-201ENST00000310190 TGFB2P61812 414 aa23.05■■□□□ 1.28
CCS-201ENST00000310190 HYPKQ9NX55 129 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms