RNA–Protein interactions for RNA: ENST00000291386.3

SSU72-201, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSU72, Length 1,290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-201ENST00000291386 IFT57Q9NWB7 429 aa35.13■■■■□ 3.21
SSU72-201ENST00000291386 RTCBQ9Y3I0 505 aaKnown RBP35.13■■■■□ 3.21
SSU72-201ENST00000291386 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP35.11■■■■□ 3.21
SSU72-201ENST00000291386 ADRA2BP18089 450 aa35.11■■■■□ 3.21
SSU72-201ENST00000291386 LAMB4A4D0S4 1761 aa35.1■■■■□ 3.21
SSU72-201ENST00000291386 GIGYF1O75420 1035 aaPredicted RBP35.1■■■■□ 3.21
SSU72-201ENST00000291386 GNAI1P63096 354 aa35.1■■■■□ 3.21
SSU72-201ENST00000291386 USP16Q9Y5T5 823 aa35.1■■■■□ 3.21
SSU72-201ENST00000291386 LAS1LQ9Y4W2 734 aaKnown RBP35.09■■■■□ 3.21
SSU72-201ENST00000291386 LRP5O75197 1615 aa35.08■■■■□ 3.21
SSU72-201ENST00000291386 SENP3-EIF4A1A0A087X0R7 540 aa35.08■■■■□ 3.21
SSU72-201ENST00000291386 PRAMEF22A3QJZ6 481 aa35.08■■■■□ 3.21
SSU72-201ENST00000291386 IL16Q14005 1332 aa35.07■■■■□ 3.21
SSU72-201ENST00000291386 COL24A1Q17RW2 1714 aa35.07■■■■□ 3.2
SSU72-201ENST00000291386 TRAPPC3LQ5T215 181 aa35.07■■■■□ 3.2
SSU72-201ENST00000291386 MTFR1LQ9H019 292 aa35.07■■■■□ 3.2
SSU72-201ENST00000291386 ZBTB1Q9Y2K1 713 aa35.07■■■■□ 3.2
SSU72-201ENST00000291386 PHF14O94880 888 aa35.06■■■■□ 3.2
SSU72-201ENST00000291386 WDR63Q8IWG1 891 aa35.06■■■■□ 3.2
SSU72-201ENST00000291386 MBIPQ9NS73 344 aa35.06■■■■□ 3.2
SSU72-201ENST00000291386 SOS1Q07889 1333 aaPredicted RBP35.06■■■■□ 3.2
SSU72-201ENST00000291386 SMIM5Q71RC9 77 aa35.05■■■■□ 3.2
SSU72-201ENST00000291386 ZBTB7AO95365 584 aa35.03■■■■□ 3.2
SSU72-201ENST00000291386 ARHGEF1Q92888 912 aaKnown RBP35.03■■■■□ 3.2
SSU72-201ENST00000291386 SPON1Q9HCB6 807 aa35.03■■■■□ 3.2
SSU72-201ENST00000291386 C4AP0C0L4 1744 aa35.03■■■■□ 3.2
SSU72-201ENST00000291386 SALL2Q9Y467 1007 aaPredicted RBP35.02■■■■□ 3.2
SSU72-201ENST00000291386 MSH5O43196 834 aa35.01■■■■□ 3.2
SSU72-201ENST00000291386 EIF5P55010 431 aaKnown RBP35■■■■□ 3.19
SSU72-201ENST00000291386 ZNF521Q96K83 1311 aa35■■■■□ 3.19
SSU72-201ENST00000291386 A1BGP04217 495 aa34.99■■■■□ 3.19
SSU72-201ENST00000291386 CANXP27824 592 aaKnown RBP34.99■■■■□ 3.19
SSU72-201ENST00000291386 IL6STP40189 918 aaPredicted RBP34.99■■■■□ 3.19
SSU72-201ENST00000291386 COL15A1P39059 1388 aa34.98■■■■□ 3.19
SSU72-201ENST00000291386 HOXB7P09629 217 aa34.97■■■■□ 3.19
SSU72-201ENST00000291386 RFC4P35249 363 aa34.97■■■■□ 3.19
SSU72-201ENST00000291386 SGIP1Q9BQI5 828 aa34.97■■■■□ 3.19
SSU72-201ENST00000291386 ATF5Q9Y2D1 282 aaPredicted RBP34.96■■■■□ 3.19
SSU72-201ENST00000291386 PTGER2P43116 358 aa34.95■■■■□ 3.19
SSU72-201ENST00000291386 A0A087WZG4 1122 aa34.94■■■■□ 3.18
SSU72-201ENST00000291386 ERBB4Q15303 1308 aa34.94■■■■□ 3.18
SSU72-201ENST00000291386 USP42Q9H9J4 1324 aaKnown RBP34.93■■■■□ 3.18
SSU72-201ENST00000291386 NBPF26B4DH59 902 aa34.93■■■■□ 3.18
SSU72-201ENST00000291386 KRT24Q2M2I5 525 aa34.93■■■■□ 3.18
SSU72-201ENST00000291386 NBPF10Q6P3W6 841 aaKnown RBP34.93■■■■□ 3.18
SSU72-201ENST00000291386 NBPF15Q8N660 670 aa34.93■■■■□ 3.18
SSU72-201ENST00000291386 NARFQ9UHQ1 456 aa34.91■■■■□ 3.18
SSU72-201ENST00000291386 GYS1P13807 737 aa34.89■■■■□ 3.18
SSU72-201ENST00000291386 DUSP27Q5VZP5 1158 aa34.89■■■■□ 3.18
SSU72-201ENST00000291386 TSR2Q969E8 191 aaKnown RBP34.89■■■■□ 3.18
SSU72-201ENST00000291386 NLGN1Q8N2Q7 840 aa34.88■■■■□ 3.17
SSU72-201ENST00000291386 ZPR1O75312 459 aa34.87■■■■□ 3.17
SSU72-201ENST00000291386 POLD1P28340 1107 aa34.87■■■■□ 3.17
SSU72-201ENST00000291386 PIP4K2AP48426 406 aaPredicted RBP34.87■■■■□ 3.17
SSU72-201ENST00000291386 SRP68Q9UHB9 627 aaKnown RBP34.87■■■■□ 3.17
SSU72-201ENST00000291386 EIF2S2P20042 333 aaKnown RBP34.86■■■■□ 3.17
SSU72-201ENST00000291386 MSL1Q68DK7 614 aa34.86■■■■□ 3.17
SSU72-201ENST00000291386 NPM2Q86SE8 214 aaKnown RBP34.86■■■■□ 3.17
SSU72-201ENST00000291386 SPINK5Q9NQ38 1064 aaPredicted RBP34.86■■■■□ 3.17
SSU72-201ENST00000291386 FANCIQ9NVI1 1328 aa34.85■■■■□ 3.17
SSU72-201ENST00000291386 C8orf58Q8NAV2 365 aa34.85■■■■□ 3.17
SSU72-201ENST00000291386 PDIA6Q15084 440 aa34.84■■■■□ 3.17
SSU72-201ENST00000291386 USPL1Q5W0Q7 1092 aa34.84■■■■□ 3.17
SSU72-201ENST00000291386 MYH16Q9H6N6 1097 aa34.84■■■■□ 3.17
SSU72-201ENST00000291386 SCN7AQ01118 1682 aa34.83■■■■□ 3.17
SSU72-201ENST00000291386 ZNF330Q9Y3S2 320 aaPredicted RBP34.83■■■■□ 3.17
SSU72-201ENST00000291386 GOLGA2Q08379 1002 aa34.82■■■■□ 3.16
SSU72-201ENST00000291386 HDGFL1Q5TGJ6 251 aa34.82■■■■□ 3.16
SSU72-201ENST00000291386 BCORQ6W2J9 1755 aa34.82■■■■□ 3.16
SSU72-201ENST00000291386 LRP10Q7Z4F1 713 aa34.81■■■■□ 3.16
SSU72-201ENST00000291386 DZIP3Q86Y13 1208 aaKnown RBP34.81■■■■□ 3.16
SSU72-201ENST00000291386 CHMP4AQ9BY43 222 aa34.81■■■■□ 3.16
SSU72-201ENST00000291386 BCL2L12Q9HB09 334 aa34.81■■■■□ 3.16
SSU72-201ENST00000291386 RGL2O15211 777 aa34.8■■■■□ 3.16
SSU72-201ENST00000291386 ARXQ96QS3 562 aa34.8■■■■□ 3.16
SSU72-201ENST00000291386 TBC1D2BQ9UPU7 963 aa34.8■■■■□ 3.16
SSU72-201ENST00000291386 CAMTA2O94983 1202 aa34.79■■■■□ 3.16
SSU72-201ENST00000291386 FKBP8Q14318 412 aa34.79■■■■□ 3.16
SSU72-201ENST00000291386 TSPYL6Q8N831 410 aa34.79■■■■□ 3.16
SSU72-201ENST00000291386 DDX21Q9NR30 783 aaKnown RBP eCLIP34.79■■■■□ 3.16
SSU72-201ENST00000291386 ELL2O00472 640 aaPredicted RBP34.78■■■■□ 3.16
SSU72-201ENST00000291386 MYL6BP14649 208 aa34.78■■■■□ 3.16
SSU72-201ENST00000291386 E9PSI1 815 aa34.77■■■■□ 3.16
SSU72-201ENST00000291386 PPP1R1BQ9UD71 204 aaPredicted RBP34.77■■■■□ 3.16
SSU72-201ENST00000291386 NECTIN2Q92692 538 aa34.76■■■■□ 3.16
SSU72-201ENST00000291386 DBF4Q9UBU7 674 aaPredicted RBP34.76■■■■□ 3.16
SSU72-201ENST00000291386 MMP10P09238 476 aa34.75■■■■□ 3.15
SSU72-201ENST00000291386 TM4SF1P30408 202 aa34.75■■■■□ 3.15
SSU72-201ENST00000291386 PROSER3Q2NL68 480 aa34.75■■■■□ 3.15
SSU72-201ENST00000291386 TWISTNBQ3B726 338 aaPredicted RBP34.75■■■■□ 3.15
SSU72-201ENST00000291386 SLFN5Q08AF3 891 aa34.74■■■■□ 3.15
SSU72-201ENST00000291386 CLEC4GQ6UXB4 293 aa34.74■■■■□ 3.15
SSU72-201ENST00000291386 CHPF2Q9P2E5 772 aa34.74■■■■□ 3.15
SSU72-201ENST00000291386 ERVV-1B6SEH8 477 aa34.72■■■■□ 3.15
SSU72-201ENST00000291386 EXOSC9Q06265 439 aaKnown RBP34.72■■■■□ 3.15
SSU72-201ENST00000291386 ANXA1P04083 346 aa34.71■■■■□ 3.15
SSU72-201ENST00000291386 CCDC30Q5VVM6 783 aa34.71■■■■□ 3.15
SSU72-201ENST00000291386 HNRNPUQ00839 825 aaKnown RBP eCLIP34.7■■■■□ 3.15
SSU72-201ENST00000291386 TRMT2AQ8IZ69 625 aaKnown RBP34.7■■■■□ 3.15
SSU72-201ENST00000291386 HYPKQ9NX55 129 aa34.7■■■■□ 3.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms