RNA–Protein interactions for RNA: ENST00000269724.5

SAMD1-201, Transcript of sterile alpha motif domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene SAMD1, Length 750 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD1-201ENST00000269724 MIS18AQ9NYP9 233 aa25.08■■□□□ 1.61
SAMD1-201ENST00000269724 MSH5O43196 834 aa25.07■■□□□ 1.6
SAMD1-201ENST00000269724 PHF14O94880 888 aa25.07■■□□□ 1.6
SAMD1-201ENST00000269724 TSPYL4Q9UJ04 414 aa25.07■■□□□ 1.6
SAMD1-201ENST00000269724 FAM9BQ8IZU0 186 aa25.06■■□□□ 1.6
SAMD1-201ENST00000269724 CHL1O00533 1208 aa25.05■■□□□ 1.6
SAMD1-201ENST00000269724 PTGER2P43116 358 aa25.05■■□□□ 1.6
SAMD1-201ENST00000269724 EIF4A1P60842 406 aaKnown RBP25.05■■□□□ 1.6
SAMD1-201ENST00000269724 NGEFQ8N5V2 710 aa25.05■■□□□ 1.6
SAMD1-201ENST00000269724 SGIP1Q9BQI5 828 aa25.05■■□□□ 1.6
SAMD1-201ENST00000269724 ATF5Q9Y2D1 282 aaPredicted RBP25.05■■□□□ 1.6
SAMD1-201ENST00000269724 CFAP44Q96MT7 982 aa25.04■■□□□ 1.6
SAMD1-201ENST00000269724 SOS1Q07889 1333 aaPredicted RBP25.04■■□□□ 1.6
SAMD1-201ENST00000269724 LAMB4A4D0S4 1761 aa25.03■■□□□ 1.6
SAMD1-201ENST00000269724 ARHGEF1Q92888 912 aaKnown RBP25.03■■□□□ 1.6
SAMD1-201ENST00000269724 C4AP0C0L4 1744 aa25.03■■□□□ 1.6
SAMD1-201ENST00000269724 GIGYF1O75420 1035 aaPredicted RBP25.02■■□□□ 1.6
SAMD1-201ENST00000269724 RFC4P35249 363 aa25.02■■□□□ 1.6
SAMD1-201ENST00000269724 ZBTB1Q9Y2K1 713 aa25.02■■□□□ 1.6
SAMD1-201ENST00000269724 USP16Q9Y5T5 823 aa25.02■■□□□ 1.6
SAMD1-201ENST00000269724 POLD1P28340 1107 aa25.01■■□□□ 1.59
SAMD1-201ENST00000269724 IFT57Q9NWB7 429 aa25.01■■□□□ 1.59
SAMD1-201ENST00000269724 ZNF853P0CG23 659 aa25■■□□□ 1.59
SAMD1-201ENST00000269724 SMIM5Q71RC9 77 aa25■■□□□ 1.59
SAMD1-201ENST00000269724 IL6STP40189 918 aaPredicted RBP24.99■■□□□ 1.59
SAMD1-201ENST00000269724 EIF5P55010 431 aaKnown RBP24.99■■□□□ 1.59
SAMD1-201ENST00000269724 GNAI1P63096 354 aa24.99■■□□□ 1.59
SAMD1-201ENST00000269724 WWC1Q8IX03 1113 aa24.99■■□□□ 1.59
SAMD1-201ENST00000269724 COL15A1P39059 1388 aa24.98■■□□□ 1.59
SAMD1-201ENST00000269724 A0A087WZG4 1122 aa24.98■■□□□ 1.59
SAMD1-201ENST00000269724 PPP1R1BQ9UD71 204 aaPredicted RBP24.98■■□□□ 1.59
SAMD1-201ENST00000269724 USP42Q9H9J4 1324 aaKnown RBP24.97■■□□□ 1.59
SAMD1-201ENST00000269724 PRAMEF22A3QJZ6 481 aa24.97■■□□□ 1.59
SAMD1-201ENST00000269724 A1BGP04217 495 aa24.97■■□□□ 1.59
SAMD1-201ENST00000269724 CANXP27824 592 aaKnown RBP24.97■■□□□ 1.59
SAMD1-201ENST00000269724 NLGN1Q8N2Q7 840 aa24.97■■□□□ 1.59
SAMD1-201ENST00000269724 LAS1LQ9Y4W2 734 aaKnown RBP24.97■■□□□ 1.59
SAMD1-201ENST00000269724 IL16Q14005 1332 aa24.96■■□□□ 1.59
SAMD1-201ENST00000269724 ARXQ96QS3 562 aa24.95■■□□□ 1.58
SAMD1-201ENST00000269724 ERBB4Q15303 1308 aa24.94■■□□□ 1.58
SAMD1-201ENST00000269724 ZPR1O75312 459 aa24.94■■□□□ 1.58
SAMD1-201ENST00000269724 HOXB7P09629 217 aa24.94■■□□□ 1.58
SAMD1-201ENST00000269724 GYS1P13807 737 aa24.94■■□□□ 1.58
SAMD1-201ENST00000269724 NPM2Q86SE8 214 aaKnown RBP24.94■■□□□ 1.58
SAMD1-201ENST00000269724 MIER1Q8N108 512 aa24.94■■□□□ 1.58
SAMD1-201ENST00000269724 MBIPQ9NS73 344 aa24.94■■□□□ 1.58
SAMD1-201ENST00000269724 NARFQ9UHQ1 456 aa24.94■■□□□ 1.58
SAMD1-201ENST00000269724 MSL1Q68DK7 614 aa24.93■■□□□ 1.58
SAMD1-201ENST00000269724 WDR63Q8IWG1 891 aa24.93■■□□□ 1.58
SAMD1-201ENST00000269724 NBPF26B4DH59 902 aa24.9■■□□□ 1.58
SAMD1-201ENST00000269724 NBPF10Q6P3W6 841 aaKnown RBP24.9■■□□□ 1.58
SAMD1-201ENST00000269724 NBPF15Q8N660 670 aa24.9■■□□□ 1.58
SAMD1-201ENST00000269724 RGL2O15211 777 aa24.89■■□□□ 1.58
SAMD1-201ENST00000269724 SRP68Q9UHB9 627 aaKnown RBP24.89■■□□□ 1.58
SAMD1-201ENST00000269724 USPL1Q5W0Q7 1092 aa24.88■■□□□ 1.57
SAMD1-201ENST00000269724 SCN7AQ01118 1682 aa24.88■■□□□ 1.57
SAMD1-201ENST00000269724 MMP10P09238 476 aa24.86■■□□□ 1.57
SAMD1-201ENST00000269724 FKBP8Q14318 412 aa24.86■■□□□ 1.57
SAMD1-201ENST00000269724 CHMP4AQ9BY43 222 aa24.86■■□□□ 1.57
SAMD1-201ENST00000269724 ZNF330Q9Y3S2 320 aaPredicted RBP24.86■■□□□ 1.57
SAMD1-201ENST00000269724 BCORQ6W2J9 1755 aa24.85■■□□□ 1.57
SAMD1-201ENST00000269724 SENP3-EIF4A1A0A087X0R7 540 aa24.85■■□□□ 1.57
SAMD1-201ENST00000269724 DZIP3Q86Y13 1208 aaKnown RBP24.85■■□□□ 1.57
SAMD1-201ENST00000269724 SALL2Q9Y467 1007 aaPredicted RBP24.85■■□□□ 1.57
SAMD1-201ENST00000269724 EIF2S2P20042 333 aaKnown RBP24.84■■□□□ 1.57
SAMD1-201ENST00000269724 PIP4K2AP48426 406 aaPredicted RBP24.84■■□□□ 1.57
SAMD1-201ENST00000269724 KRT24Q2M2I5 525 aa24.84■■□□□ 1.57
SAMD1-201ENST00000269724 DUSP27Q5VZP5 1158 aa24.84■■□□□ 1.57
SAMD1-201ENST00000269724 FHDC1Q9C0D6 1143 aaPredicted RBP24.84■■□□□ 1.57
SAMD1-201ENST00000269724 BCL2L12Q9HB09 334 aa24.84■■□□□ 1.57
SAMD1-201ENST00000269724 TBC1D2BQ9UPU7 963 aa24.84■■□□□ 1.57
SAMD1-201ENST00000269724 ZNF521Q96K83 1311 aa24.84■■□□□ 1.57
SAMD1-201ENST00000269724 CAMTA2O94983 1202 aa24.83■■□□□ 1.57
SAMD1-201ENST00000269724 TM4SF1P30408 202 aa24.83■■□□□ 1.57
SAMD1-201ENST00000269724 CLEC4GQ6UXB4 293 aa24.83■■□□□ 1.57
SAMD1-201ENST00000269724 PDIA6Q15084 440 aa24.82■■□□□ 1.56
SAMD1-201ENST00000269724 SYT17Q9BSW7 474 aa24.82■■□□□ 1.56
SAMD1-201ENST00000269724 CD2APQ9Y5K6 639 aa24.82■■□□□ 1.56
SAMD1-201ENST00000269724 PARP3Q9Y6F1 533 aa24.82■■□□□ 1.56
SAMD1-201ENST00000269724 HDGFL1Q5TGJ6 251 aa24.81■■□□□ 1.56
SAMD1-201ENST00000269724 DDX21Q9NR30 783 aaKnown RBP eCLIP24.81■■□□□ 1.56
SAMD1-201ENST00000269724 ZNF652Q9Y2D9 606 aa24.81■■□□□ 1.56
SAMD1-201ENST00000269724 LRP10Q7Z4F1 713 aa24.8■■□□□ 1.56
SAMD1-201ENST00000269724 TSR2Q969E8 191 aaKnown RBP24.8■■□□□ 1.56
SAMD1-201ENST00000269724 ERVV-1B6SEH8 477 aa24.79■■□□□ 1.56
SAMD1-201ENST00000269724 MYL6BP14649 208 aa24.79■■□□□ 1.56
SAMD1-201ENST00000269724 C8orf58Q8NAV2 365 aa24.79■■□□□ 1.56
SAMD1-201ENST00000269724 MYH16Q9H6N6 1097 aa24.79■■□□□ 1.56
SAMD1-201ENST00000269724 KIF13BQ9NQT8 1826 aa24.79■■□□□ 1.56
SAMD1-201ENST00000269724 NFIXQ14938 502 aa24.78■■□□□ 1.56
SAMD1-201ENST00000269724 DBF4Q9UBU7 674 aaPredicted RBP24.78■■□□□ 1.56
SAMD1-201ENST00000269724 FANCIQ9NVI1 1328 aa24.78■■□□□ 1.56
SAMD1-201ENST00000269724 POLRMTO00411 1230 aaKnown RBP24.77■■□□□ 1.56
SAMD1-201ENST00000269724 DDR1Q08345 913 aa24.77■■□□□ 1.56
SAMD1-201ENST00000269724 GOLGA2Q08379 1002 aa24.77■■□□□ 1.56
SAMD1-201ENST00000269724 KIF6Q6ZMV9 814 aa24.77■■□□□ 1.56
SAMD1-201ENST00000269724 NRXN2Q9P2S2 1712 aa24.77■■□□□ 1.56
SAMD1-201ENST00000269724 MAP3K15Q6ZN16 1313 aa24.76■■□□□ 1.55
SAMD1-201ENST00000269724 PROSER3Q2NL68 480 aa24.75■■□□□ 1.55
SAMD1-201ENST00000269724 NECTIN2Q92692 538 aa24.75■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms