RNA–Protein interactions for RNA: ENST00000265732.9

RBM48-201, Transcript of RNA binding motif protein 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RBM48, Length 1,742 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM48-201ENST00000265732 TSR2Q969E8 191 aaKnown RBP12.74□□□□□ -0.37
RBM48-201ENST00000265732 AKT1S1Q96B36 256 aa12.74□□□□□ -0.37
RBM48-201ENST00000265732 IL16Q14005 1332 aa12.74□□□□□ -0.37
RBM48-201ENST00000265732 GIGYF1O75420 1035 aaPredicted RBP12.74□□□□□ -0.37
RBM48-201ENST00000265732 PHF14O94880 888 aa12.74□□□□□ -0.37
RBM48-201ENST00000265732 CYP19A1P11511 503 aaPredicted RBP12.74□□□□□ -0.37
RBM48-201ENST00000265732 RTCBQ9Y3I0 505 aaKnown RBP12.74□□□□□ -0.37
RBM48-201ENST00000265732 USP16Q9Y5T5 823 aa12.74□□□□□ -0.37
RBM48-201ENST00000265732 LAMB4A4D0S4 1761 aa12.73□□□□□ -0.37
RBM48-201ENST00000265732 CNTNAP4Q9C0A0 1308 aa12.73□□□□□ -0.37
RBM48-201ENST00000265732 RC3H1Q5TC82 1133 aaKnown RBP12.73□□□□□ -0.37
RBM48-201ENST00000265732 CCDC87Q9NVE4 849 aa12.73□□□□□ -0.37
RBM48-201ENST00000265732 QSER1Q2KHR3 1735 aa12.72□□□□□ -0.37
RBM48-201ENST00000265732 EIF2S2P20042 333 aaKnown RBP12.72□□□□□ -0.37
RBM48-201ENST00000265732 CANXP27824 592 aaKnown RBP12.72□□□□□ -0.37
RBM48-201ENST00000265732 GOLGA2Q08379 1002 aa12.72□□□□□ -0.37
RBM48-201ENST00000265732 KRT24Q2M2I5 525 aa12.72□□□□□ -0.37
RBM48-201ENST00000265732 NPM2Q86SE8 214 aaKnown RBP12.72□□□□□ -0.37
RBM48-201ENST00000265732 MYH16Q9H6N6 1097 aa12.72□□□□□ -0.37
RBM48-201ENST00000265732 ZNF330Q9Y3S2 320 aaPredicted RBP12.72□□□□□ -0.37
RBM48-201ENST00000265732 ELL2O00472 640 aaPredicted RBP12.71□□□□□ -0.37
RBM48-201ENST00000265732 ZNF521Q96K83 1311 aa12.71□□□□□ -0.37
RBM48-201ENST00000265732 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.71□□□□□ -0.38
RBM48-201ENST00000265732 A1BGP04217 495 aa12.71□□□□□ -0.38
RBM48-201ENST00000265732 TRAPPC3LQ5T215 181 aa12.71□□□□□ -0.38
RBM48-201ENST00000265732 INTS5Q6P9B9 1019 aaKnown RBP12.71□□□□□ -0.38
RBM48-201ENST00000265732 SMIM5Q71RC9 77 aa12.71□□□□□ -0.38
RBM48-201ENST00000265732 FLAD1Q8NFF5 587 aa12.71□□□□□ -0.38
RBM48-201ENST00000265732 SPINK5Q9NQ38 1064 aaPredicted RBP12.71□□□□□ -0.38
RBM48-201ENST00000265732 ZBTB1Q9Y2K1 713 aa12.71□□□□□ -0.38
RBM48-201ENST00000265732 FANCIQ9NVI1 1328 aa12.7□□□□□ -0.38
RBM48-201ENST00000265732 RPS6KA4O75676 772 aa12.7□□□□□ -0.38
RBM48-201ENST00000265732 SSFA2P28290 1259 aa12.7□□□□□ -0.38
RBM48-201ENST00000265732 PIP4K2AP48426 406 aaPredicted RBP12.7□□□□□ -0.38
RBM48-201ENST00000265732 DUSP27Q5VZP5 1158 aa12.7□□□□□ -0.38
RBM48-201ENST00000265732 NECTIN2Q92692 538 aa12.7□□□□□ -0.38
RBM48-201ENST00000265732 ARXQ96QS3 562 aa12.7□□□□□ -0.38
RBM48-201ENST00000265732 PDGFDQ9GZP0 370 aaPredicted RBP12.7□□□□□ -0.38
RBM48-201ENST00000265732 PNPLA7Q6ZV29 1317 aa12.7□□□□□ -0.38
RBM48-201ENST00000265732 GOLGB1Q14789 3259 aaKnown RBP12.69□□□□□ -0.38
RBM48-201ENST00000265732 RFC4P35249 363 aa12.69□□□□□ -0.38
RBM48-201ENST00000265732 AMIGO3Q86WK7 504 aa12.69□□□□□ -0.38
RBM48-201ENST00000265732 COL23A1Q86Y22 540 aaPredicted RBP12.69□□□□□ -0.38
RBM48-201ENST00000265732 E9PSI1 815 aa12.68□□□□□ -0.38
RBM48-201ENST00000265732 C8orf58Q8NAV2 365 aa12.68□□□□□ -0.38
RBM48-201ENST00000265732 CDCA7LQ96GN5 454 aa12.68□□□□□ -0.38
RBM48-201ENST00000265732 CACNA1FO60840 1977 aa12.68□□□□□ -0.38
RBM48-201ENST00000265732 C4AP0C0L4 1744 aa12.68□□□□□ -0.38
RBM48-201ENST00000265732 HOXB7P09629 217 aa12.68□□□□□ -0.38
RBM48-201ENST00000265732 HDGFL1Q5TGJ6 251 aa12.68□□□□□ -0.38
RBM48-201ENST00000265732 ARHGEF1Q92888 912 aaKnown RBP12.68□□□□□ -0.38
RBM48-201ENST00000265732 MYL6BP14649 208 aa12.67□□□□□ -0.38
RBM48-201ENST00000265732 IL6STP40189 918 aaPredicted RBP12.67□□□□□ -0.38
RBM48-201ENST00000265732 TWISTNBQ3B726 338 aaPredicted RBP12.67□□□□□ -0.38
RBM48-201ENST00000265732 TSPYL6Q8N831 410 aa12.67□□□□□ -0.38
RBM48-201ENST00000265732 CASZ1Q86V15 1759 aa12.67□□□□□ -0.38
RBM48-201ENST00000265732 SOS1Q07889 1333 aaPredicted RBP12.67□□□□□ -0.38
RBM48-201ENST00000265732 COL15A1P39059 1388 aa12.67□□□□□ -0.38
RBM48-201ENST00000265732 ZPR1O75312 459 aa12.66□□□□□ -0.38
RBM48-201ENST00000265732 ZBTB7AO95365 584 aa12.66□□□□□ -0.38
RBM48-201ENST00000265732 EXOSC9Q06265 439 aaKnown RBP12.66□□□□□ -0.38
RBM48-201ENST00000265732 SLFN5Q08AF3 891 aa12.66□□□□□ -0.38
RBM48-201ENST00000265732 CHMP4AQ9BY43 222 aa12.66□□□□□ -0.38
RBM48-201ENST00000265732 NBPF26B4DH59 902 aa12.65□□□□□ -0.38
RBM48-201ENST00000265732 EIF5P55010 431 aaKnown RBP12.65□□□□□ -0.38
RBM48-201ENST00000265732 NBPF10Q6P3W6 841 aaKnown RBP12.65□□□□□ -0.38
RBM48-201ENST00000265732 NBPF15Q8N660 670 aa12.65□□□□□ -0.38
RBM48-201ENST00000265732 SLC16A10Q8TF71 515 aa12.65□□□□□ -0.38
RBM48-201ENST00000265732 YTHDC1Q96MU7 727 aaKnown RBP12.65□□□□□ -0.38
RBM48-201ENST00000265732 ZBED9Q6R2W3 1325 aa12.65□□□□□ -0.38
RBM48-201ENST00000265732 A0A087WZG4 1122 aa12.65□□□□□ -0.38
RBM48-201ENST00000265732 CHPF2Q9P2E5 772 aa12.65□□□□□ -0.38
RBM48-201ENST00000265732 TBC1D2BQ9UPU7 963 aa12.65□□□□□ -0.38
RBM48-201ENST00000265732 ATF5Q9Y2D1 282 aaPredicted RBP12.65□□□□□ -0.38
RBM48-201ENST00000265732 ANXA1P04083 346 aa12.64□□□□□ -0.39
RBM48-201ENST00000265732 CCDC30Q5VVM6 783 aa12.64□□□□□ -0.39
RBM48-201ENST00000265732 MSL1Q68DK7 614 aa12.64□□□□□ -0.39
RBM48-201ENST00000265732 MTFR1LQ9H019 292 aa12.64□□□□□ -0.39
RBM48-201ENST00000265732 DBF4Q9UBU7 674 aaPredicted RBP12.64□□□□□ -0.39
RBM48-201ENST00000265732 ERBB4Q15303 1308 aa12.64□□□□□ -0.39
RBM48-201ENST00000265732 DZIP3Q86Y13 1208 aaKnown RBP12.63□□□□□ -0.39
RBM48-201ENST00000265732 STK31Q9BXU1 1019 aa12.63□□□□□ -0.39
RBM48-201ENST00000265732 SPON1Q9HCB6 807 aa12.63□□□□□ -0.39
RBM48-201ENST00000265732 DDX21Q9NR30 783 aaKnown RBP eCLIP12.63□□□□□ -0.39
RBM48-201ENST00000265732 SRP68Q9UHB9 627 aaKnown RBP12.63□□□□□ -0.39
RBM48-201ENST00000265732 NUP98P52948 1817 aa12.63□□□□□ -0.39
RBM48-201ENST00000265732 USP42Q9H9J4 1324 aaKnown RBP12.62□□□□□ -0.39
RBM48-201ENST00000265732 TCERG1O14776 1098 aaKnown RBP12.62□□□□□ -0.39
RBM48-201ENST00000265732 AIMP1Q12904 312 aaKnown RBP12.62□□□□□ -0.39
RBM48-201ENST00000265732 PROSER3Q2NL68 480 aa12.62□□□□□ -0.39
RBM48-201ENST00000265732 USPL1Q5W0Q7 1092 aa12.62□□□□□ -0.39
RBM48-201ENST00000265732 NARFQ9UHQ1 456 aa12.62□□□□□ -0.39
RBM48-201ENST00000265732 VAMP4O75379 141 aa12.62□□□□□ -0.39
RBM48-201ENST00000265732 PDIA6Q15084 440 aa12.62□□□□□ -0.39
RBM48-201ENST00000265732 KIF6Q6ZMV9 814 aa12.62□□□□□ -0.39
RBM48-201ENST00000265732 UTRNP46939 3433 aa12.61□□□□□ -0.39
RBM48-201ENST00000265732 GYS1P13807 737 aa12.61□□□□□ -0.39
RBM48-201ENST00000265732 NLGN1Q8N2Q7 840 aa12.61□□□□□ -0.39
RBM48-201ENST00000265732 HYPKQ9NX55 129 aa12.61□□□□□ -0.39
RBM48-201ENST00000265732 POLD1P28340 1107 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms