RNA–Protein interactions for RNA: ENST00000252456.6

CNN1-201, Transcript of calponin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNN1, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-201ENST00000252456 ADRA2BP18089 450 aa18.74■□□□□ 0.59
CNN1-201ENST00000252456 LMOD3Q0VAK6 560 aa18.74■□□□□ 0.59
CNN1-201ENST00000252456 ARHGEF1Q92888 912 aaKnown RBP18.74■□□□□ 0.59
CNN1-201ENST00000252456 SOS1Q07889 1333 aaPredicted RBP18.73■□□□□ 0.59
CNN1-201ENST00000252456 TRAPPC3LQ5T215 181 aa18.73■□□□□ 0.59
CNN1-201ENST00000252456 PPP1R1BQ9UD71 204 aaPredicted RBP18.72■□□□□ 0.59
CNN1-201ENST00000252456 STARD3NLO95772 234 aa18.71■□□□□ 0.58
CNN1-201ENST00000252456 ARXQ96QS3 562 aa18.71■□□□□ 0.58
CNN1-201ENST00000252456 TEX13AQ9BXU3 409 aaPredicted RBP18.71■□□□□ 0.58
CNN1-201ENST00000252456 USP16Q9Y5T5 823 aa18.71■□□□□ 0.58
CNN1-201ENST00000252456 COL15A1P39059 1388 aa18.7■□□□□ 0.58
CNN1-201ENST00000252456 EIF4A1P60842 406 aaKnown RBP18.7■□□□□ 0.58
CNN1-201ENST00000252456 SNRPA1P09661 255 aaKnown RBP18.69■□□□□ 0.58
CNN1-201ENST00000252456 POLD1P28340 1107 aa18.69■□□□□ 0.58
CNN1-201ENST00000252456 USP42Q9H9J4 1324 aaKnown RBP18.69■□□□□ 0.58
CNN1-201ENST00000252456 GYS1P13807 737 aa18.68■□□□□ 0.58
CNN1-201ENST00000252456 RFC4P35249 363 aa18.68■□□□□ 0.58
CNN1-201ENST00000252456 FHDC1Q9C0D6 1143 aaPredicted RBP18.68■□□□□ 0.58
CNN1-201ENST00000252456 SRP68Q9UHB9 627 aaKnown RBP18.68■□□□□ 0.58
CNN1-201ENST00000252456 GOLGB1Q14789 3259 aaKnown RBP18.68■□□□□ 0.58
CNN1-201ENST00000252456 SCN7AQ01118 1682 aa18.68■□□□□ 0.58
CNN1-201ENST00000252456 A1BGP04217 495 aa18.67■□□□□ 0.58
CNN1-201ENST00000252456 CANXP27824 592 aaKnown RBP18.67■□□□□ 0.58
CNN1-201ENST00000252456 EIF5P55010 431 aaKnown RBP18.67■□□□□ 0.58
CNN1-201ENST00000252456 BABAM1Q9NWV8 329 aa18.67■□□□□ 0.58
CNN1-201ENST00000252456 TSPYL4Q9UJ04 414 aa18.67■□□□□ 0.58
CNN1-201ENST00000252456 GIGYF1O75420 1035 aaPredicted RBP18.67■□□□□ 0.58
CNN1-201ENST00000252456 CHL1O00533 1208 aa18.66■□□□□ 0.58
CNN1-201ENST00000252456 SYT17Q9BSW7 474 aa18.66■□□□□ 0.58
CNN1-201ENST00000252456 BCORQ6W2J9 1755 aa18.66■□□□□ 0.58
CNN1-201ENST00000252456 UTRNP46939 3433 aa18.64■□□□□ 0.58
CNN1-201ENST00000252456 SENP3-EIF4A1A0A087X0R7 540 aa18.64■□□□□ 0.57
CNN1-201ENST00000252456 NBPF26B4DH59 902 aa18.64■□□□□ 0.57
CNN1-201ENST00000252456 IL6STP40189 918 aaPredicted RBP18.64■□□□□ 0.57
CNN1-201ENST00000252456 PIP4K2AP48426 406 aaPredicted RBP18.64■□□□□ 0.57
CNN1-201ENST00000252456 NBPF10Q6P3W6 841 aaKnown RBP18.64■□□□□ 0.57
CNN1-201ENST00000252456 NBPF15Q8N660 670 aa18.64■□□□□ 0.57
CNN1-201ENST00000252456 FKBP8Q14318 412 aa18.63■□□□□ 0.57
CNN1-201ENST00000252456 NLGN1Q8N2Q7 840 aa18.63■□□□□ 0.57
CNN1-201ENST00000252456 BCL2L12Q9HB09 334 aa18.63■□□□□ 0.57
CNN1-201ENST00000252456 NARFQ9UHQ1 456 aa18.63■□□□□ 0.57
CNN1-201ENST00000252456 KIF13BQ9NQT8 1826 aa18.63■□□□□ 0.57
CNN1-201ENST00000252456 MMP10P09238 476 aa18.63■□□□□ 0.57
CNN1-201ENST00000252456 ZNF853P0CG23 659 aa18.63■□□□□ 0.57
CNN1-201ENST00000252456 USPL1Q5W0Q7 1092 aa18.62■□□□□ 0.57
CNN1-201ENST00000252456 FAM9BQ8IZU0 186 aa18.62■□□□□ 0.57
CNN1-201ENST00000252456 CFAP44Q96MT7 982 aa18.62■□□□□ 0.57
CNN1-201ENST00000252456 CCDC27Q2M243 656 aa18.61■□□□□ 0.57
CNN1-201ENST00000252456 KIAA1551Q9HCM1 1747 aa18.61■□□□□ 0.57
CNN1-201ENST00000252456 AFDNP55196 1824 aaKnown RBP18.6■□□□□ 0.57
CNN1-201ENST00000252456 ZPR1O75312 459 aa18.6■□□□□ 0.57
CNN1-201ENST00000252456 KRT24Q2M2I5 525 aa18.6■□□□□ 0.57
CNN1-201ENST00000252456 LAS1LQ9Y4W2 734 aaKnown RBP18.6■□□□□ 0.57
CNN1-201ENST00000252456 NRXN2Q9P2S2 1712 aa18.6■□□□□ 0.57
CNN1-201ENST00000252456 DDR1Q08345 913 aa18.6■□□□□ 0.57
CNN1-201ENST00000252456 NCBP3Q53F19 620 aaKnown RBP18.6■□□□□ 0.57
CNN1-201ENST00000252456 NLGN2Q8NFZ4 835 aa18.6■□□□□ 0.57
CNN1-201ENST00000252456 MBIPQ9NS73 344 aa18.6■□□□□ 0.57
CNN1-201ENST00000252456 ZNF330Q9Y3S2 320 aaPredicted RBP18.6■□□□□ 0.57
CNN1-201ENST00000252456 WWC1Q8IX03 1113 aa18.59■□□□□ 0.57
CNN1-201ENST00000252456 KLHL34Q8N239 644 aa18.59■□□□□ 0.57
CNN1-201ENST00000252456 IFT57Q9NWB7 429 aa18.59■□□□□ 0.57
CNN1-201ENST00000252456 TBC1D2BQ9UPU7 963 aa18.59■□□□□ 0.57
CNN1-201ENST00000252456 A0A087WZG4 1122 aa18.58■□□□□ 0.56
CNN1-201ENST00000252456 TM4SF1P30408 202 aa18.58■□□□□ 0.56
CNN1-201ENST00000252456 C10orf71Q711Q0 1435 aa18.58■□□□□ 0.56
CNN1-201ENST00000252456 CAMTA2O94983 1202 aa18.57■□□□□ 0.56
CNN1-201ENST00000252456 CD2APQ9Y5K6 639 aa18.57■□□□□ 0.56
CNN1-201ENST00000252456 CCER2I3L3R5 266 aa18.56■□□□□ 0.56
CNN1-201ENST00000252456 CALD1Q05682 793 aaKnown RBP18.56■□□□□ 0.56
CNN1-201ENST00000252456 NFIXQ14938 502 aa18.56■□□□□ 0.56
CNN1-201ENST00000252456 DIEXFQ68CQ4 756 aaKnown RBP18.56■□□□□ 0.56
CNN1-201ENST00000252456 POLRMTO00411 1230 aaKnown RBP18.56■□□□□ 0.56
CNN1-201ENST00000252456 GNAI1P63096 354 aa18.56■□□□□ 0.56
CNN1-201ENST00000252456 PDIA6Q15084 440 aa18.56■□□□□ 0.56
CNN1-201ENST00000252456 LRP10Q7Z4F1 713 aa18.56■□□□□ 0.56
CNN1-201ENST00000252456 DZIP3Q86Y13 1208 aaKnown RBP18.56■□□□□ 0.56
CNN1-201ENST00000252456 ERBB4Q15303 1308 aa18.55■□□□□ 0.56
CNN1-201ENST00000252456 N4BP2Q86UW6 1770 aaPredicted RBP18.54■□□□□ 0.56
CNN1-201ENST00000252456 PARP3Q9Y6F1 533 aa18.54■□□□□ 0.56
CNN1-201ENST00000252456 NUP98P52948 1817 aa18.54■□□□□ 0.56
CNN1-201ENST00000252456 EIF2S2P20042 333 aaKnown RBP18.53■□□□□ 0.56
CNN1-201ENST00000252456 PROSER3Q2NL68 480 aa18.53■□□□□ 0.56
CNN1-201ENST00000252456 TBC1D9BQ66K14 1250 aa18.53■□□□□ 0.56
CNN1-201ENST00000252456 HOXB7P09629 217 aa18.52■□□□□ 0.56
CNN1-201ENST00000252456 SALL2Q9Y467 1007 aaPredicted RBP18.52■□□□□ 0.56
CNN1-201ENST00000252456 BRCA1P38398 1863 aaKnown RBP18.52■□□□□ 0.56
CNN1-201ENST00000252456 PXDNLA1KZ92 1463 aa18.52■□□□□ 0.56
CNN1-201ENST00000252456 IL16Q14005 1332 aa18.52■□□□□ 0.56
CNN1-201ENST00000252456 MYL6BP14649 208 aa18.52■□□□□ 0.55
CNN1-201ENST00000252456 NPM2Q86SE8 214 aaKnown RBP18.52■□□□□ 0.55
CNN1-201ENST00000252456 ANXA1P04083 346 aa18.51■□□□□ 0.55
CNN1-201ENST00000252456 DUSP27Q5VZP5 1158 aa18.51■□□□□ 0.55
CNN1-201ENST00000252456 TTLL7Q6ZT98 887 aa18.51■□□□□ 0.55
CNN1-201ENST00000252456 NECTIN2Q92692 538 aa18.51■□□□□ 0.55
CNN1-201ENST00000252456 TSR2Q969E8 191 aaKnown RBP18.51■□□□□ 0.55
CNN1-201ENST00000252456 ANKRD31Q8N7Z5 1873 aa18.5■□□□□ 0.55
CNN1-201ENST00000252456 MIER1Q8N108 512 aa18.5■□□□□ 0.55
CNN1-201ENST00000252456 C8orf58Q8NAV2 365 aa18.5■□□□□ 0.55
CNN1-201ENST00000252456 RGL2O15211 777 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms