RNA–Protein interactions for RNA: ENST00000225504.7

SUPT4H1-201, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUPT4H1, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-201ENST00000225504 CASZ1Q86V15 1759 aa18.83■□□□□ 0.6
SUPT4H1-201ENST00000225504 CICQ96RK0 1608 aaPredicted RBP18.82■□□□□ 0.6
SUPT4H1-201ENST00000225504 GIGYF1O75420 1035 aaPredicted RBP18.82■□□□□ 0.6
SUPT4H1-201ENST00000225504 KRT24Q2M2I5 525 aa18.82■□□□□ 0.6
SUPT4H1-201ENST00000225504 ATF5Q9Y2D1 282 aaPredicted RBP18.82■□□□□ 0.6
SUPT4H1-201ENST00000225504 NCBP3Q53F19 620 aaKnown RBP18.81■□□□□ 0.6
SUPT4H1-201ENST00000225504 TEX13AQ9BXU3 409 aaPredicted RBP18.81■□□□□ 0.6
SUPT4H1-201ENST00000225504 MBIPQ9NS73 344 aa18.81■□□□□ 0.6
SUPT4H1-201ENST00000225504 ZBTB1Q9Y2K1 713 aa18.81■□□□□ 0.6
SUPT4H1-201ENST00000225504 RTCBQ9Y3I0 505 aaKnown RBP18.81■□□□□ 0.6
SUPT4H1-201ENST00000225504 STARD3NLO95772 234 aa18.8■□□□□ 0.6
SUPT4H1-201ENST00000225504 CANXP27824 592 aaKnown RBP18.8■□□□□ 0.6
SUPT4H1-201ENST00000225504 PIP4K2AP48426 406 aaPredicted RBP18.8■□□□□ 0.6
SUPT4H1-201ENST00000225504 ARHGEF1Q92888 912 aaKnown RBP18.8■□□□□ 0.6
SUPT4H1-201ENST00000225504 QSER1Q2KHR3 1735 aa18.8■□□□□ 0.6
SUPT4H1-201ENST00000225504 SSFA2P28290 1259 aa18.79■□□□□ 0.6
SUPT4H1-201ENST00000225504 TRAPPC3LQ5T215 181 aa18.79■□□□□ 0.6
SUPT4H1-201ENST00000225504 GNAI1P63096 354 aa18.78■□□□□ 0.6
SUPT4H1-201ENST00000225504 FLAD1Q8NFF5 587 aa18.78■□□□□ 0.6
SUPT4H1-201ENST00000225504 IFT57Q9NWB7 429 aa18.78■□□□□ 0.6
SUPT4H1-201ENST00000225504 CALD1Q05682 793 aaKnown RBP18.77■□□□□ 0.6
SUPT4H1-201ENST00000225504 SPINK5Q9NQ38 1064 aaPredicted RBP18.77■□□□□ 0.6
SUPT4H1-201ENST00000225504 NBPF26B4DH59 902 aa18.77■□□□□ 0.59
SUPT4H1-201ENST00000225504 NBPF10Q6P3W6 841 aaKnown RBP18.77■□□□□ 0.59
SUPT4H1-201ENST00000225504 NBPF15Q8N660 670 aa18.77■□□□□ 0.59
SUPT4H1-201ENST00000225504 TSR2Q969E8 191 aaKnown RBP18.77■□□□□ 0.59
SUPT4H1-201ENST00000225504 SOS1Q07889 1333 aaPredicted RBP18.77■□□□□ 0.59
SUPT4H1-201ENST00000225504 EIF5P55010 431 aaKnown RBP18.76■□□□□ 0.59
SUPT4H1-201ENST00000225504 MSL1Q68DK7 614 aa18.76■□□□□ 0.59
SUPT4H1-201ENST00000225504 WDR63Q8IWG1 891 aa18.76■□□□□ 0.59
SUPT4H1-201ENST00000225504 SLC16A10Q8TF71 515 aa18.76■□□□□ 0.59
SUPT4H1-201ENST00000225504 MTFR1LQ9H019 292 aa18.76■□□□□ 0.59
SUPT4H1-201ENST00000225504 SPON1Q9HCB6 807 aa18.76■□□□□ 0.59
SUPT4H1-201ENST00000225504 PTGER2P43116 358 aa18.75■□□□□ 0.59
SUPT4H1-201ENST00000225504 SRP68Q9UHB9 627 aaKnown RBP18.75■□□□□ 0.59
SUPT4H1-201ENST00000225504 ELL2O00472 640 aaPredicted RBP18.74■□□□□ 0.59
SUPT4H1-201ENST00000225504 ADRA2BP18089 450 aa18.74■□□□□ 0.59
SUPT4H1-201ENST00000225504 EIF2S2P20042 333 aaKnown RBP18.74■□□□□ 0.59
SUPT4H1-201ENST00000225504 RFC4P35249 363 aa18.74■□□□□ 0.59
SUPT4H1-201ENST00000225504 C8orf58Q8NAV2 365 aa18.74■□□□□ 0.59
SUPT4H1-201ENST00000225504 NECTIN2Q92692 538 aa18.74■□□□□ 0.59
SUPT4H1-201ENST00000225504 SGIP1Q9BQI5 828 aa18.74■□□□□ 0.59
SUPT4H1-201ENST00000225504 ZNF521Q96K83 1311 aa18.74■□□□□ 0.59
SUPT4H1-201ENST00000225504 IL16Q14005 1332 aa18.73■□□□□ 0.59
SUPT4H1-201ENST00000225504 NGEFQ8N5V2 710 aa18.73■□□□□ 0.59
SUPT4H1-201ENST00000225504 ZNF330Q9Y3S2 320 aaPredicted RBP18.73■□□□□ 0.59
SUPT4H1-201ENST00000225504 DUSP27Q5VZP5 1158 aa18.72■□□□□ 0.59
SUPT4H1-201ENST00000225504 SRCAPQ6ZRS2 3230 aa18.72■□□□□ 0.59
SUPT4H1-201ENST00000225504 IL6STP40189 918 aaPredicted RBP18.71■□□□□ 0.59
SUPT4H1-201ENST00000225504 TSPYL6Q8N831 410 aa18.71■□□□□ 0.59
SUPT4H1-201ENST00000225504 TBC1D2BQ9UPU7 963 aa18.71■□□□□ 0.59
SUPT4H1-201ENST00000225504 COL15A1P39059 1388 aa18.71■□□□□ 0.59
SUPT4H1-201ENST00000225504 GYS1P13807 737 aa18.71■□□□□ 0.59
SUPT4H1-201ENST00000225504 C4AP0C0L4 1744 aa18.7■□□□□ 0.58
SUPT4H1-201ENST00000225504 ANXA1P04083 346 aa18.7■□□□□ 0.58
SUPT4H1-201ENST00000225504 PDIA6Q15084 440 aa18.7■□□□□ 0.58
SUPT4H1-201ENST00000225504 USPL1Q5W0Q7 1092 aa18.7■□□□□ 0.58
SUPT4H1-201ENST00000225504 USP42Q9H9J4 1324 aaKnown RBP18.69■□□□□ 0.58
SUPT4H1-201ENST00000225504 LAMB4A4D0S4 1761 aa18.69■□□□□ 0.58
SUPT4H1-201ENST00000225504 MYL6BP14649 208 aa18.69■□□□□ 0.58
SUPT4H1-201ENST00000225504 FKBP8Q14318 412 aa18.69■□□□□ 0.58
SUPT4H1-201ENST00000225504 PROSER3Q2NL68 480 aa18.69■□□□□ 0.58
SUPT4H1-201ENST00000225504 ARXQ96QS3 562 aa18.69■□□□□ 0.58
SUPT4H1-201ENST00000225504 BCL2L12Q9HB09 334 aa18.69■□□□□ 0.58
SUPT4H1-201ENST00000225504 NARFQ9UHQ1 456 aa18.69■□□□□ 0.58
SUPT4H1-201ENST00000225504 FANCIQ9NVI1 1328 aa18.68■□□□□ 0.58
SUPT4H1-201ENST00000225504 CDCA7LQ96GN5 454 aa18.68■□□□□ 0.58
SUPT4H1-201ENST00000225504 ZPR1O75312 459 aa18.67■□□□□ 0.58
SUPT4H1-201ENST00000225504 COL24A1Q17RW2 1714 aa18.67■□□□□ 0.58
SUPT4H1-201ENST00000225504 EXOSC9Q06265 439 aaKnown RBP18.66■□□□□ 0.58
SUPT4H1-201ENST00000225504 LRP10Q7Z4F1 713 aa18.66■□□□□ 0.58
SUPT4H1-201ENST00000225504 LRP5O75197 1615 aa18.66■□□□□ 0.58
SUPT4H1-201ENST00000225504 A0A087WZG4 1122 aa18.65■□□□□ 0.58
SUPT4H1-201ENST00000225504 HOXB7P09629 217 aa18.65■□□□□ 0.58
SUPT4H1-201ENST00000225504 GOLGA2Q08379 1002 aa18.65■□□□□ 0.58
SUPT4H1-201ENST00000225504 HDGFL1Q5TGJ6 251 aa18.65■□□□□ 0.58
SUPT4H1-201ENST00000225504 TTLL7Q6ZT98 887 aa18.65■□□□□ 0.58
SUPT4H1-201ENST00000225504 DZIP3Q86Y13 1208 aaKnown RBP18.65■□□□□ 0.58
SUPT4H1-201ENST00000225504 NLGN1Q8N2Q7 840 aa18.65■□□□□ 0.58
SUPT4H1-201ENST00000225504 CAMTA2O94983 1202 aa18.65■□□□□ 0.58
SUPT4H1-201ENST00000225504 CHPF2Q9P2E5 772 aa18.65■□□□□ 0.58
SUPT4H1-201ENST00000225504 TCERG1O14776 1098 aaKnown RBP18.64■□□□□ 0.57
SUPT4H1-201ENST00000225504 MMP10P09238 476 aa18.64■□□□□ 0.57
SUPT4H1-201ENST00000225504 POLD1P28340 1107 aa18.64■□□□□ 0.57
SUPT4H1-201ENST00000225504 TM4SF1P30408 202 aa18.64■□□□□ 0.57
SUPT4H1-201ENST00000225504 HNRNPUQ00839 825 aaKnown RBP eCLIP18.64■□□□□ 0.57
SUPT4H1-201ENST00000225504 SLFN5Q08AF3 891 aa18.64■□□□□ 0.57
SUPT4H1-201ENST00000225504 NPM2Q86SE8 214 aaKnown RBP18.64■□□□□ 0.57
SUPT4H1-201ENST00000225504 PPP1R1BQ9UD71 204 aaPredicted RBP18.64■□□□□ 0.57
SUPT4H1-201ENST00000225504 ERBB4Q15303 1308 aa18.63■□□□□ 0.57
SUPT4H1-201ENST00000225504 TWISTNBQ3B726 338 aaPredicted RBP18.63■□□□□ 0.57
SUPT4H1-201ENST00000225504 MYH16Q9H6N6 1097 aa18.63■□□□□ 0.57
SUPT4H1-201ENST00000225504 DDX21Q9NR30 783 aaKnown RBP eCLIP18.63■□□□□ 0.57
SUPT4H1-201ENST00000225504 HLFQ16534 295 aa18.62■□□□□ 0.57
SUPT4H1-201ENST00000225504 VAMP4O75379 141 aa18.61■□□□□ 0.57
SUPT4H1-201ENST00000225504 DDR1Q08345 913 aa18.61■□□□□ 0.57
SUPT4H1-201ENST00000225504 NFIXQ14938 502 aa18.61■□□□□ 0.57
SUPT4H1-201ENST00000225504 TBC1D9BQ66K14 1250 aa18.61■□□□□ 0.57
SUPT4H1-201ENST00000225504 BICDL1Q6ZP65 573 aa18.61■□□□□ 0.57
SUPT4H1-201ENST00000225504 COPS6Q7L5N1 327 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms