RNA–Protein interactions for RNA: ENST00000221847.5

EBI3-201, Transcript of Epstein-Barr virus induced 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EBI3, Length 1,186 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBI3-201ENST00000221847 STARD3NLO95772 234 aa20.98■□□□□ 0.95
EBI3-201ENST00000221847 TRAPPC3LQ5T215 181 aa20.98■□□□□ 0.95
EBI3-201ENST00000221847 SNRPA1P09661 255 aaKnown RBP20.97■□□□□ 0.95
EBI3-201ENST00000221847 EIF4A1P60842 406 aaKnown RBP20.97■□□□□ 0.95
EBI3-201ENST00000221847 MIER1Q8N108 512 aa20.97■□□□□ 0.95
EBI3-201ENST00000221847 ARHGEF1Q92888 912 aaKnown RBP20.97■□□□□ 0.95
EBI3-201ENST00000221847 ZBTB1Q9Y2K1 713 aa20.97■□□□□ 0.95
EBI3-201ENST00000221847 LAS1LQ9Y4W2 734 aaKnown RBP20.97■□□□□ 0.95
EBI3-201ENST00000221847 USP16Q9Y5T5 823 aa20.97■□□□□ 0.95
EBI3-201ENST00000221847 PTGER2P43116 358 aa20.96■□□□□ 0.95
EBI3-201ENST00000221847 BABAM1Q9NWV8 329 aa20.96■□□□□ 0.95
EBI3-201ENST00000221847 CHL1O00533 1208 aa20.95■□□□□ 0.94
EBI3-201ENST00000221847 ADRA2BP18089 450 aa20.95■□□□□ 0.94
EBI3-201ENST00000221847 CANXP27824 592 aaKnown RBP20.95■□□□□ 0.94
EBI3-201ENST00000221847 MSL1Q68DK7 614 aa20.95■□□□□ 0.94
EBI3-201ENST00000221847 SOS1Q07889 1333 aaPredicted RBP20.95■□□□□ 0.94
EBI3-201ENST00000221847 A1BGP04217 495 aa20.94■□□□□ 0.94
EBI3-201ENST00000221847 SGIP1Q9BQI5 828 aa20.94■□□□□ 0.94
EBI3-201ENST00000221847 SALL2Q9Y467 1007 aaPredicted RBP20.94■□□□□ 0.94
EBI3-201ENST00000221847 GIGYF1O75420 1035 aaPredicted RBP20.93■□□□□ 0.94
EBI3-201ENST00000221847 RFC4P35249 363 aa20.93■□□□□ 0.94
EBI3-201ENST00000221847 CCDC27Q2M243 656 aa20.92■□□□□ 0.94
EBI3-201ENST00000221847 WWC1Q8IX03 1113 aa20.92■□□□□ 0.94
EBI3-201ENST00000221847 CFAP44Q96MT7 982 aa20.92■□□□□ 0.94
EBI3-201ENST00000221847 ZNF853P0CG23 659 aa20.91■□□□□ 0.94
EBI3-201ENST00000221847 CALD1Q05682 793 aaKnown RBP20.91■□□□□ 0.94
EBI3-201ENST00000221847 PPP1R1BQ9UD71 204 aaPredicted RBP20.91■□□□□ 0.94
EBI3-201ENST00000221847 PIP4K2AP48426 406 aaPredicted RBP20.9■□□□□ 0.94
EBI3-201ENST00000221847 EIF5P55010 431 aaKnown RBP20.9■□□□□ 0.94
EBI3-201ENST00000221847 NCBP3Q53F19 620 aaKnown RBP20.9■□□□□ 0.94
EBI3-201ENST00000221847 SRP68Q9UHB9 627 aaKnown RBP20.9■□□□□ 0.94
EBI3-201ENST00000221847 COL15A1P39059 1388 aa20.89■□□□□ 0.93
EBI3-201ENST00000221847 POLD1P28340 1107 aa20.89■□□□□ 0.93
EBI3-201ENST00000221847 MBIPQ9NS73 344 aa20.89■□□□□ 0.93
EBI3-201ENST00000221847 IFT57Q9NWB7 429 aa20.89■□□□□ 0.93
EBI3-201ENST00000221847 C4AP0C0L4 1744 aa20.88■□□□□ 0.93
EBI3-201ENST00000221847 COL24A1Q17RW2 1714 aa20.88■□□□□ 0.93
EBI3-201ENST00000221847 GNAI1P63096 354 aa20.88■□□□□ 0.93
EBI3-201ENST00000221847 KRT24Q2M2I5 525 aa20.88■□□□□ 0.93
EBI3-201ENST00000221847 ARXQ96QS3 562 aa20.88■□□□□ 0.93
EBI3-201ENST00000221847 ZNF330Q9Y3S2 320 aaPredicted RBP20.88■□□□□ 0.93
EBI3-201ENST00000221847 NBPF26B4DH59 902 aa20.87■□□□□ 0.93
EBI3-201ENST00000221847 GYS1P13807 737 aa20.87■□□□□ 0.93
EBI3-201ENST00000221847 IL6STP40189 918 aaPredicted RBP20.87■□□□□ 0.93
EBI3-201ENST00000221847 NBPF10Q6P3W6 841 aaKnown RBP20.87■□□□□ 0.93
EBI3-201ENST00000221847 NBPF15Q8N660 670 aa20.87■□□□□ 0.93
EBI3-201ENST00000221847 USP42Q9H9J4 1324 aaKnown RBP20.86■□□□□ 0.93
EBI3-201ENST00000221847 A0A087WZG4 1122 aa20.85■□□□□ 0.93
EBI3-201ENST00000221847 ZPR1O75312 459 aa20.85■□□□□ 0.93
EBI3-201ENST00000221847 USPL1Q5W0Q7 1092 aa20.85■□□□□ 0.93
EBI3-201ENST00000221847 NLGN1Q8N2Q7 840 aa20.85■□□□□ 0.93
EBI3-201ENST00000221847 NARFQ9UHQ1 456 aa20.85■□□□□ 0.93
EBI3-201ENST00000221847 LAMB4A4D0S4 1761 aa20.85■□□□□ 0.93
EBI3-201ENST00000221847 EIF2S2P20042 333 aaKnown RBP20.84■□□□□ 0.93
EBI3-201ENST00000221847 FKBP8Q14318 412 aa20.84■□□□□ 0.93
EBI3-201ENST00000221847 TBC1D2BQ9UPU7 963 aa20.84■□□□□ 0.93
EBI3-201ENST00000221847 NPM2Q86SE8 214 aaKnown RBP20.83■□□□□ 0.93
EBI3-201ENST00000221847 NGEFQ8N5V2 710 aa20.83■□□□□ 0.93
EBI3-201ENST00000221847 IL16Q14005 1332 aa20.82■□□□□ 0.92
EBI3-201ENST00000221847 MMP10P09238 476 aa20.82■□□□□ 0.92
EBI3-201ENST00000221847 WDR63Q8IWG1 891 aa20.82■□□□□ 0.92
EBI3-201ENST00000221847 NECTIN2Q92692 538 aa20.82■□□□□ 0.92
EBI3-201ENST00000221847 TSR2Q969E8 191 aaKnown RBP20.82■□□□□ 0.92
EBI3-201ENST00000221847 DUSP27Q5VZP5 1158 aa20.81■□□□□ 0.92
EBI3-201ENST00000221847 FHDC1Q9C0D6 1143 aaPredicted RBP20.81■□□□□ 0.92
EBI3-201ENST00000221847 BCL2L12Q9HB09 334 aa20.81■□□□□ 0.92
EBI3-201ENST00000221847 MYL6BP14649 208 aa20.8■□□□□ 0.92
EBI3-201ENST00000221847 DZIP3Q86Y13 1208 aaKnown RBP20.8■□□□□ 0.92
EBI3-201ENST00000221847 KLHL34Q8N239 644 aa20.8■□□□□ 0.92
EBI3-201ENST00000221847 ELL2O00472 640 aaPredicted RBP20.79■□□□□ 0.92
EBI3-201ENST00000221847 C8orf58Q8NAV2 365 aa20.79■□□□□ 0.92
EBI3-201ENST00000221847 ERBB4Q15303 1308 aa20.78■□□□□ 0.92
EBI3-201ENST00000221847 CAMTA2O94983 1202 aa20.78■□□□□ 0.92
EBI3-201ENST00000221847 HOXB7P09629 217 aa20.78■□□□□ 0.92
EBI3-201ENST00000221847 PDIA6Q15084 440 aa20.78■□□□□ 0.92
EBI3-201ENST00000221847 SYT17Q9BSW7 474 aa20.78■□□□□ 0.92
EBI3-201ENST00000221847 ANXA1P04083 346 aa20.77■□□□□ 0.92
EBI3-201ENST00000221847 TM4SF1P30408 202 aa20.77■□□□□ 0.92
EBI3-201ENST00000221847 DDR1Q08345 913 aa20.77■□□□□ 0.92
EBI3-201ENST00000221847 PROSER3Q2NL68 480 aa20.77■□□□□ 0.92
EBI3-201ENST00000221847 HDGFL1Q5TGJ6 251 aa20.77■□□□□ 0.92
EBI3-201ENST00000221847 SPINK5Q9NQ38 1064 aaPredicted RBP20.77■□□□□ 0.92
EBI3-201ENST00000221847 PARP3Q9Y6F1 533 aa20.77■□□□□ 0.92
EBI3-201ENST00000221847 ZNF521Q96K83 1311 aa20.77■□□□□ 0.91
EBI3-201ENST00000221847 NFIXQ14938 502 aa20.76■□□□□ 0.91
EBI3-201ENST00000221847 TSPYL6Q8N831 410 aa20.76■□□□□ 0.91
EBI3-201ENST00000221847 TTLL7Q6ZT98 887 aa20.75■□□□□ 0.91
EBI3-201ENST00000221847 LRP10Q7Z4F1 713 aa20.75■□□□□ 0.91
EBI3-201ENST00000221847 FANCIQ9NVI1 1328 aa20.75■□□□□ 0.91
EBI3-201ENST00000221847 TBC1D9BQ66K14 1250 aa20.74■□□□□ 0.91
EBI3-201ENST00000221847 BICDL1Q6ZP65 573 aa20.74■□□□□ 0.91
EBI3-201ENST00000221847 DDX21Q9NR30 783 aaKnown RBP eCLIP20.74■□□□□ 0.91
EBI3-201ENST00000221847 CHPF2Q9P2E5 772 aa20.74■□□□□ 0.91
EBI3-201ENST00000221847 SCN7AQ01118 1682 aa20.73■□□□□ 0.91
EBI3-201ENST00000221847 POLRMTO00411 1230 aaKnown RBP20.73■□□□□ 0.91
EBI3-201ENST00000221847 GOLGA2Q08379 1002 aa20.72■□□□□ 0.91
EBI3-201ENST00000221847 NLGN2Q8NFZ4 835 aa20.72■□□□□ 0.91
EBI3-201ENST00000221847 CD2APQ9Y5K6 639 aa20.72■□□□□ 0.91
EBI3-201ENST00000221847 HLFQ16534 295 aa20.71■□□□□ 0.91
EBI3-201ENST00000221847 KIF6Q6ZMV9 814 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms