RNA–Protein interactions for RNA: ENSMUST00000209979.1

Ptpre-204, Transcript of Receptor-type tyrosine-protein phosphatase epsilon, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Ptpre, Length 4,959 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpre-204ENSMUST00000209979 Fam13aQ8BGI4 693 aa10.47□□□□□ -0.73
Ptpre-204ENSMUST00000209979 Ccdc38Q8CDN8 563 aa10.47□□□□□ -0.73
Ptpre-204ENSMUST00000209979 Znf131Q8K3J5 619 aa10.47□□□□□ -0.73
Ptpre-204ENSMUST00000209979 Nop53Q8BK35 484 aaKnown RBP10.47□□□□□ -0.73
Ptpre-204ENSMUST00000209979 Fam177a1Q8BR63 207 aa10.47□□□□□ -0.73
Ptpre-204ENSMUST00000209979 Krt7Q9DCV7 457 aa10.47□□□□□ -0.73
Ptpre-204ENSMUST00000209979 Camk4P08414 469 aa10.47□□□□□ -0.73
Ptpre-204ENSMUST00000209979 Yeats4Q9CR11 227 aaKnown RBP10.47□□□□□ -0.73
Ptpre-204ENSMUST00000209979 Stx6Q9JKK1 255 aa10.47□□□□□ -0.73
Ptpre-204ENSMUST00000209979 Gm28919A0A087WP35 240 aa10.46□□□□□ -0.73
Ptpre-204ENSMUST00000209979 Cfap73J3QPZ5 306 aa10.46□□□□□ -0.73
Ptpre-204ENSMUST00000209979 Limch1Q3UH68 1057 aa10.46□□□□□ -0.73
Ptpre-204ENSMUST00000209979 Cc2d1bQ8BRN9 848 aa10.46□□□□□ -0.73
Ptpre-204ENSMUST00000209979 CebpzP53569 1052 aaKnown RBP10.46□□□□□ -0.73
Ptpre-204ENSMUST00000209979 Cct4P80315 539 aaKnown RBP10.46□□□□□ -0.73
Ptpre-204ENSMUST00000209979 Cpa2Q504N0 417 aa10.46□□□□□ -0.73
Ptpre-204ENSMUST00000209979 Sos1Q62245 1319 aa10.46□□□□□ -0.73
Ptpre-204ENSMUST00000209979 Tbc1d32Q3URV1 1296 aa10.46□□□□□ -0.74
Ptpre-204ENSMUST00000209979 Kiaa1524Q8BWY9 907 aa10.46□□□□□ -0.74
Ptpre-204ENSMUST00000209979 Basp1Q91XV3 226 aa10.46□□□□□ -0.74
Ptpre-204ENSMUST00000209979 Ampd3O08739 766 aa10.46□□□□□ -0.74
Ptpre-204ENSMUST00000209979 Vps41Q5KU39 853 aa10.46□□□□□ -0.74
Ptpre-204ENSMUST00000209979 Q7TT23 1179 aa10.46□□□□□ -0.74
Ptpre-204ENSMUST00000209979 Rbbp5Q8BX09 538 aaKnown RBP10.46□□□□□ -0.74
Ptpre-204ENSMUST00000209979 Gle1Q8R322 699 aa10.46□□□□□ -0.74
Ptpre-204ENSMUST00000209979 PpanQ91YU8 470 aaKnown RBP10.46□□□□□ -0.74
Ptpre-204ENSMUST00000209979 Znf704Q9ERQ3 566 aa10.46□□□□□ -0.74
Ptpre-204ENSMUST00000209979 Efcc1Q9JJF6 558 aa10.46□□□□□ -0.74
Ptpre-204ENSMUST00000209979 Tagap1P0CAX8 505 aa10.45□□□□□ -0.74
Ptpre-204ENSMUST00000209979 Zfp42P22227 288 aa10.45□□□□□ -0.74
Ptpre-204ENSMUST00000209979 Cep63Q3UPP8 700 aa10.45□□□□□ -0.74
Ptpre-204ENSMUST00000209979 Fgfr1opQ66JX5 399 aa10.45□□□□□ -0.74
Ptpre-204ENSMUST00000209979 Tsga10Q6NY15 697 aa10.45□□□□□ -0.74
Ptpre-204ENSMUST00000209979 Txndc16Q7TN22 820 aa10.45□□□□□ -0.74
Ptpre-204ENSMUST00000209979 Kdm4aQ8BW72 1064 aa10.45□□□□□ -0.74
Ptpre-204ENSMUST00000209979 Sil1Q9EPK6 465 aa10.45□□□□□ -0.74
Ptpre-204ENSMUST00000209979 Uso1Q9Z1Z0 959 aaKnown RBP10.45□□□□□ -0.74
Ptpre-204ENSMUST00000209979 Cc2d2bA0A286YDU8 1405 aa10.45□□□□□ -0.74
Ptpre-204ENSMUST00000209979 Ccdc170D3YXL0 722 aa10.45□□□□□ -0.74
Ptpre-204ENSMUST00000209979 ClgnP52194 611 aa10.45□□□□□ -0.74
Ptpre-204ENSMUST00000209979 Ccdc162pQ0VG85 912 aa10.45□□□□□ -0.74
Ptpre-204ENSMUST00000209979 Cetn1P41209 172 aa10.45□□□□□ -0.74
Ptpre-204ENSMUST00000209979 Fchsd2Q3USJ8 740 aa10.45□□□□□ -0.74
Ptpre-204ENSMUST00000209979 Nom1Q3UFM5 854 aaKnown RBP10.45□□□□□ -0.74
Ptpre-204ENSMUST00000209979 Spa17Q62252 149 aa10.45□□□□□ -0.74
Ptpre-204ENSMUST00000209979 MycbpQ9EQS3 103 aa10.45□□□□□ -0.74
Ptpre-204ENSMUST00000209979 Synj1Q8CHC4 1574 aa10.44□□□□□ -0.74
Ptpre-204ENSMUST00000209979 Prdm16A2A935 1275 aa10.44□□□□□ -0.74
Ptpre-204ENSMUST00000209979 Stmn2P55821 179 aa10.44□□□□□ -0.74
Ptpre-204ENSMUST00000209979 Cep120Q7TSG1 988 aa10.44□□□□□ -0.74
Ptpre-204ENSMUST00000209979 Srgap3Q812A2 1099 aa10.44□□□□□ -0.74
Ptpre-204ENSMUST00000209979 Baiap2l1Q9DBJ3 514 aa10.44□□□□□ -0.74
Ptpre-204ENSMUST00000209979 Mybbp1aQ7TPV4 1344 aaKnown RBP10.44□□□□□ -0.74
Ptpre-204ENSMUST00000209979 Ankib1Q6ZPS6 1085 aa10.44□□□□□ -0.74
Ptpre-204ENSMUST00000209979 Pof1bQ8K4L4 587 aa10.44□□□□□ -0.74
Ptpre-204ENSMUST00000209979 Gsto1O09131 240 aa10.44□□□□□ -0.74
Ptpre-204ENSMUST00000209979 Rad23bP54728 416 aa10.44□□□□□ -0.74
Ptpre-204ENSMUST00000209979 Nbr1P97432 988 aa10.44□□□□□ -0.74
Ptpre-204ENSMUST00000209979 Trak2Q6P9N8 913 aa10.44□□□□□ -0.74
Ptpre-204ENSMUST00000209979 Ttc12Q8BW49 704 aa10.44□□□□□ -0.74
Ptpre-204ENSMUST00000209979 Rbm33Q9CXK9 1231 aaKnown RBP10.44□□□□□ -0.74
Ptpre-204ENSMUST00000209979 Atp1a4Q9WV27 1032 aa10.44□□□□□ -0.74
Ptpre-204ENSMUST00000209979 Smarca4Q3TKT4 1613 aaKnown RBP10.43□□□□□ -0.74
Ptpre-204ENSMUST00000209979 Cdr2P97817 455 aa10.43□□□□□ -0.74
Ptpre-204ENSMUST00000209979 Smarcc2Q6PDG5 1213 aa10.43□□□□□ -0.74
Ptpre-204ENSMUST00000209979 Micall1Q8BGT6 870 aa10.43□□□□□ -0.74
Ptpre-204ENSMUST00000209979 Filip1Q9CS72 1211 aa10.43□□□□□ -0.74
Ptpre-204ENSMUST00000209979 Cwc27Q3TKY6 469 aa10.43□□□□□ -0.74
Ptpre-204ENSMUST00000209979 MlecQ6ZQI3 291 aaKnown RBP10.43□□□□□ -0.74
Ptpre-204ENSMUST00000209979 Arhgef6Q8K4I3 771 aa10.43□□□□□ -0.74
Ptpre-204ENSMUST00000209979 Uchl5Q9WUP7 329 aa10.43□□□□□ -0.74
Ptpre-204ENSMUST00000209979 Ccdc14Q8K2J4 934 aa10.43□□□□□ -0.74
Ptpre-204ENSMUST00000209979 Enox2Q8R0Z2 598 aa10.43□□□□□ -0.74
Ptpre-204ENSMUST00000209979 Polr1aO35134 1717 aaKnown RBP10.43□□□□□ -0.74
Ptpre-204ENSMUST00000209979 Abl1P00520 1123 aa10.43□□□□□ -0.74
Ptpre-204ENSMUST00000209979 Ppfia3P60469 1194 aa10.43□□□□□ -0.74
Ptpre-204ENSMUST00000209979 Slc8a1P70414 970 aa10.43□□□□□ -0.74
Ptpre-204ENSMUST00000209979 Washc4Q3UMB9 1173 aa10.43□□□□□ -0.74
Ptpre-204ENSMUST00000209979 Mink1Q9JM52 1308 aa10.42□□□□□ -0.74
Ptpre-204ENSMUST00000209979 Cttnbp2B9EJA2 1648 aa10.42□□□□□ -0.74
Ptpre-204ENSMUST00000209979 Sh2d4bA6X942 431 aa10.42□□□□□ -0.74
Ptpre-204ENSMUST00000209979 Ube3aO08759 870 aa10.42□□□□□ -0.74
Ptpre-204ENSMUST00000209979 Map3k11Q80XI6 850 aa10.42□□□□□ -0.74
Ptpre-204ENSMUST00000209979 Arhgap24Q8C4V1 747 aa10.42□□□□□ -0.74
Ptpre-204ENSMUST00000209979 Ndufab1Q9CR21 156 aa10.42□□□□□ -0.74
Ptpre-204ENSMUST00000209979 Stard3nlQ9DCI3 235 aa10.42□□□□□ -0.74
Ptpre-204ENSMUST00000209979 Sdc2P43407 202 aa10.42□□□□□ -0.74
Ptpre-204ENSMUST00000209979 Sh3bp1P55194 680 aa10.42□□□□□ -0.74
Ptpre-204ENSMUST00000209979 Ccdc174Q3U155 467 aa10.42□□□□□ -0.74
Ptpre-204ENSMUST00000209979 Gzf1Q4VBD9 706 aa10.42□□□□□ -0.74
Ptpre-204ENSMUST00000209979 Tbc1d31Q6NXY1 996 aa10.42□□□□□ -0.74
Ptpre-204ENSMUST00000209979 Ctnnbl1Q9CWL8 563 aaKnown RBP10.42□□□□□ -0.74
Ptpre-204ENSMUST00000209979 LlphQ9D945 130 aaKnown RBP10.42□□□□□ -0.74
Ptpre-204ENSMUST00000209979 Speer4bQ9D9F7 267 aa10.42□□□□□ -0.74
Ptpre-204ENSMUST00000209979 Cib2Q9Z309 187 aa10.42□□□□□ -0.74
Ptpre-204ENSMUST00000209979 Gm3409A0A0G2JE67 319 aa10.42□□□□□ -0.74
Ptpre-204ENSMUST00000209979 Kif5cP28738 956 aaKnown RBP10.42□□□□□ -0.74
Ptpre-204ENSMUST00000209979 Agbl1Q09M05 972 aa10.42□□□□□ -0.74
Ptpre-204ENSMUST00000209979 Pnpla2Q8BJ56 486 aa10.42□□□□□ -0.74
Ptpre-204ENSMUST00000209979 Rassf10Q8BL43 508 aa10.42□□□□□ -0.74
Retrieved 100 of 22,080 RNA–protein pairs in 10.9 ms