RNA–Protein interactions for RNA: ENSMUST00000136980.7

Prpf40b-208, Transcript of Pre-mRNA-processing factor 40 homolog B, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Prpf40b, Length 3,047 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40b-208ENSMUST00000136980 Glipr1l2Q9CQ35 332 aa13.73□□□□□ -0.21
Prpf40b-208ENSMUST00000136980 Ap3b2Q9JME5 1082 aa13.73□□□□□ -0.21
Prpf40b-208ENSMUST00000136980 Synj2Q9D2G5 1434 aa13.73□□□□□ -0.21
Prpf40b-208ENSMUST00000136980 Topbp1Q6ZQF0 1515 aa13.73□□□□□ -0.21
Prpf40b-208ENSMUST00000136980 Snx13Q6PHS6 957 aa13.73□□□□□ -0.21
Prpf40b-208ENSMUST00000136980 Arhgap23Q69ZH9 1483 aa13.72□□□□□ -0.21
Prpf40b-208ENSMUST00000136980 Q3TQI7 289 aaKnown RBP13.72□□□□□ -0.21
Prpf40b-208ENSMUST00000136980 Zfp51Q3U4L8 781 aa13.72□□□□□ -0.21
Prpf40b-208ENSMUST00000136980 Phf23Q8BSN5 401 aa13.72□□□□□ -0.21
Prpf40b-208ENSMUST00000136980 Ssr1Q9CY50 286 aaKnown RBP13.72□□□□□ -0.21
Prpf40b-208ENSMUST00000136980 PtprmP28828 1452 aa13.72□□□□□ -0.21
Prpf40b-208ENSMUST00000136980 Zfp804bA0A0G2JGH6 1343 aa13.72□□□□□ -0.21
Prpf40b-208ENSMUST00000136980 Zbtb45Q52KG4 520 aa13.72□□□□□ -0.21
Prpf40b-208ENSMUST00000136980 Znf541Q0GGX2 1363 aa13.72□□□□□ -0.21
Prpf40b-208ENSMUST00000136980 Larp1bA0A0A6YXJ7 370 aaKnown RBP13.72□□□□□ -0.21
Prpf40b-208ENSMUST00000136980 Cfap73J3QPZ5 306 aa13.72□□□□□ -0.21
Prpf40b-208ENSMUST00000136980 U2af2P26369 475 aaKnown RBP13.71□□□□□ -0.21
Prpf40b-208ENSMUST00000136980 Atp6v1dP57746 247 aa13.71□□□□□ -0.21
Prpf40b-208ENSMUST00000136980 CgnP59242 1191 aa13.71□□□□□ -0.21
Prpf40b-208ENSMUST00000136980 Tecpr2Q3UH45 1423 aa13.71□□□□□ -0.21
Prpf40b-208ENSMUST00000136980 Gjb2Q00977 226 aa13.71□□□□□ -0.22
Prpf40b-208ENSMUST00000136980 Zpr1Q62384 459 aa13.71□□□□□ -0.22
Prpf40b-208ENSMUST00000136980 Kcnf1Q7TSH7 493 aa13.71□□□□□ -0.22
Prpf40b-208ENSMUST00000136980 Frmd3Q8BHD4 595 aa13.71□□□□□ -0.22
Prpf40b-208ENSMUST00000136980 Qser1A2BIE1 1698 aa13.71□□□□□ -0.22
Prpf40b-208ENSMUST00000136980 Yeats2Q3TUF7 1407 aa13.7□□□□□ -0.22
Prpf40b-208ENSMUST00000136980 Ccdc173A0JLY1 547 aa13.7□□□□□ -0.22
Prpf40b-208ENSMUST00000136980 Brpf3B2KF05 1204 aaKnown RBP13.7□□□□□ -0.22
Prpf40b-208ENSMUST00000136980 Mmp8O70138 465 aa13.7□□□□□ -0.22
Prpf40b-208ENSMUST00000136980 Cd22P35329 862 aa13.7□□□□□ -0.22
Prpf40b-208ENSMUST00000136980 Utp18Q5SSI6 552 aaKnown RBP13.7□□□□□ -0.22
Prpf40b-208ENSMUST00000136980 Unc5clQ6R653 518 aa13.7□□□□□ -0.22
Prpf40b-208ENSMUST00000136980 KinQ8K339 391 aa13.7□□□□□ -0.22
Prpf40b-208ENSMUST00000136980 Tbc1d31Q6NXY1 996 aa13.7□□□□□ -0.22
Prpf40b-208ENSMUST00000136980 Ano8Q6PB70 1060 aa13.7□□□□□ -0.22
Prpf40b-208ENSMUST00000136980 Zscan22Q8BGS5 496 aa13.7□□□□□ -0.22
Prpf40b-208ENSMUST00000136980 Prdm2A2A7B5 1709 aaKnown RBP13.7□□□□□ -0.22
Prpf40b-208ENSMUST00000136980 Knl1Q66JQ7 1612 aa13.7□□□□□ -0.22
Prpf40b-208ENSMUST00000136980 Kiaa0754Q69ZZ9 979 aa13.69□□□□□ -0.22
Prpf40b-208ENSMUST00000136980 Ccdc178Q8CDV0 866 aa13.69□□□□□ -0.22
Prpf40b-208ENSMUST00000136980 Tceanc2Q8R2M0 207 aa13.69□□□□□ -0.22
Prpf40b-208ENSMUST00000136980 Rufy3Q9D394 469 aa13.69□□□□□ -0.22
Prpf40b-208ENSMUST00000136980 Stx6Q9JKK1 255 aa13.69□□□□□ -0.22
Prpf40b-208ENSMUST00000136980 NpatQ8BMA5 1420 aa13.69□□□□□ -0.22
Prpf40b-208ENSMUST00000136980 4930407I10RikD3Z5T8 1512 aa13.69□□□□□ -0.22
Prpf40b-208ENSMUST00000136980 Brpf1B2RRD7 1212 aa13.69□□□□□ -0.22
Prpf40b-208ENSMUST00000136980 Slc4a10Q5DTL9 1118 aa13.69□□□□□ -0.22
Prpf40b-208ENSMUST00000136980 Sf3a1Q8K4Z5 791 aaKnown RBP13.69□□□□□ -0.22
Prpf40b-208ENSMUST00000136980 Trim30aP15533 496 aa13.69□□□□□ -0.22
Prpf40b-208ENSMUST00000136980 Ica1lQ3TY65 431 aa13.69□□□□□ -0.22
Prpf40b-208ENSMUST00000136980 Nol8Q3UHX0 1147 aaKnown RBP13.68□□□□□ -0.22
Prpf40b-208ENSMUST00000136980 EspnlQ3UYR4 1005 aa13.68□□□□□ -0.22
Prpf40b-208ENSMUST00000136980 Afap1Q80YS6 731 aa13.68□□□□□ -0.22
Prpf40b-208ENSMUST00000136980 Wdr24Q8CFJ9 790 aa13.68□□□□□ -0.22
Prpf40b-208ENSMUST00000136980 Smc3Q9CW03 1217 aaKnown RBP13.68□□□□□ -0.22
Prpf40b-208ENSMUST00000136980 Kif3aP28741 701 aa13.68□□□□□ -0.22
Prpf40b-208ENSMUST00000136980 Tsr2Q8C8T8 191 aa13.68□□□□□ -0.22
Prpf40b-208ENSMUST00000136980 Usp32F8VPZ3 1604 aa13.67□□□□□ -0.22
Prpf40b-208ENSMUST00000136980 Abca14E9Q8F8 1683 aa13.67□□□□□ -0.22
Prpf40b-208ENSMUST00000136980 Tpd52l1O54818 204 aa13.67□□□□□ -0.22
Prpf40b-208ENSMUST00000136980 Kcna4Q61423 654 aa13.67□□□□□ -0.22
Prpf40b-208ENSMUST00000136980 Nrbp1Q99J45 535 aa13.67□□□□□ -0.22
Prpf40b-208ENSMUST00000136980 Atp8b2P98199 1209 aa13.66□□□□□ -0.22
Prpf40b-208ENSMUST00000136980 Wdr93Q402B2 695 aa13.66□□□□□ -0.22
Prpf40b-208ENSMUST00000136980 Sass6Q80UK7 654 aa13.66□□□□□ -0.22
Prpf40b-208ENSMUST00000136980 Plekhg1F6S200 1446 aa13.66□□□□□ -0.22
Prpf40b-208ENSMUST00000136980 Smarce1O54941 411 aaKnown RBP13.66□□□□□ -0.22
Prpf40b-208ENSMUST00000136980 Ms4a2P20490 235 aa13.66□□□□□ -0.22
Prpf40b-208ENSMUST00000136980 Ccdc66Q6NS45 935 aa13.66□□□□□ -0.22
Prpf40b-208ENSMUST00000136980 Ints3Q7TPD0 1041 aaKnown RBP13.66□□□□□ -0.22
Prpf40b-208ENSMUST00000136980 Nfe2l3Q9WTM4 660 aa13.66□□□□□ -0.22
Prpf40b-208ENSMUST00000136980 NktrP30415 1453 aa13.66□□□□□ -0.22
Prpf40b-208ENSMUST00000136980 Kif20bQ80WE4 1774 aaKnown RBP13.66□□□□□ -0.22
Prpf40b-208ENSMUST00000136980 Fmnl2A2APV2 1086 aa13.66□□□□□ -0.22
Prpf40b-208ENSMUST00000136980 Ube2hP62257 183 aa13.66□□□□□ -0.22
Prpf40b-208ENSMUST00000136980 Map3k13Q1HKZ5 959 aa13.66□□□□□ -0.22
Prpf40b-208ENSMUST00000136980 Fam184aE9PW83 1143 aa13.65□□□□□ -0.22
Prpf40b-208ENSMUST00000136980 Anapc15P60007 132 aa13.65□□□□□ -0.22
Prpf40b-208ENSMUST00000136980 Cdca7lQ922M5 438 aa13.65□□□□□ -0.22
Prpf40b-208ENSMUST00000136980 Card6E9PWH2 1175 aa13.65□□□□□ -0.22
Prpf40b-208ENSMUST00000136980 Pcdh10E9PXQ7 1057 aa13.65□□□□□ -0.22
Prpf40b-208ENSMUST00000136980 Mcmdc2E9Q956 681 aa13.64□□□□□ -0.23
Prpf40b-208ENSMUST00000136980 Syt1P46096 421 aa13.64□□□□□ -0.23
Prpf40b-208ENSMUST00000136980 Strn4P58404 760 aa13.64□□□□□ -0.23
Prpf40b-208ENSMUST00000136980 Tlr7P58681 1050 aa13.64□□□□□ -0.23
Prpf40b-208ENSMUST00000136980 Cnnm3Q32NY4 713 aa13.64□□□□□ -0.23
Prpf40b-208ENSMUST00000136980 Fez2Q6TYB5 348 aa13.64□□□□□ -0.23
Prpf40b-208ENSMUST00000136980 OptnQ8K3K8 584 aa13.64□□□□□ -0.23
Prpf40b-208ENSMUST00000136980 Akap12Q9WTQ5 1684 aa13.64□□□□□ -0.23
Prpf40b-208ENSMUST00000136980 Ano6Q6P9J9 911 aa13.64□□□□□ -0.23
Prpf40b-208ENSMUST00000136980 Ccdc7Q9D541 371 aa13.64□□□□□ -0.23
Prpf40b-208ENSMUST00000136980 Usp25P57080 1055 aa13.64□□□□□ -0.23
Prpf40b-208ENSMUST00000136980 Tbc1d30Q69ZT9 766 aa13.64□□□□□ -0.23
Prpf40b-208ENSMUST00000136980 Znf771Q8BJ90 317 aa13.64□□□□□ -0.23
Prpf40b-208ENSMUST00000136980 HypkQ9CR41 129 aa13.64□□□□□ -0.23
Prpf40b-208ENSMUST00000136980 Capn2O08529 700 aa13.63□□□□□ -0.23
Prpf40b-208ENSMUST00000136980 Ddx19aQ61655 478 aaKnown RBP13.63□□□□□ -0.23
Prpf40b-208ENSMUST00000136980 Brf1Q8CFK2 676 aa13.63□□□□□ -0.23
Prpf40b-208ENSMUST00000136980 Ndufa8Q9DCJ5 172 aa13.63□□□□□ -0.23
Prpf40b-208ENSMUST00000136980 Tbc1d8Q9Z1A9 1134 aa13.63□□□□□ -0.23
Retrieved 100 of 22,080 RNA–protein pairs in 663.6 ms