RNA–Protein interactions for RNA: ENSMUST00000095899.4

Syne1-202, Transcript of Nesprin-1, mousemouse

TSL 1 (best) BASIC

Gene Syne1, Length 3,443 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Syne1-202ENSMUST00000095899 Unc5clQ6R653 518 aa9.99□□□□□ -0.81
Syne1-202ENSMUST00000095899 Farp2Q91VS8 1065 aa9.99□□□□□ -0.81
Syne1-202ENSMUST00000095899 Tpx2A2APB8 745 aaKnown RBP9.99□□□□□ -0.81
Syne1-202ENSMUST00000095899 Vwa3bJ9JI28 736 aa9.99□□□□□ -0.81
Syne1-202ENSMUST00000095899 Ier5O89113 308 aa9.99□□□□□ -0.81
Syne1-202ENSMUST00000095899 Mrps27Q8BK72 415 aaKnown RBP9.99□□□□□ -0.81
Syne1-202ENSMUST00000095899 Casz1Q9CWL2 1761 aa9.99□□□□□ -0.81
Syne1-202ENSMUST00000095899 Ms4a2P20490 235 aa9.98□□□□□ -0.81
Syne1-202ENSMUST00000095899 Gimap6Q8K349 305 aa9.98□□□□□ -0.81
Syne1-202ENSMUST00000095899 Tmem119Q8R138 280 aa9.98□□□□□ -0.81
Syne1-202ENSMUST00000095899 Kcnh5Q920E3 988 aa9.98□□□□□ -0.81
Syne1-202ENSMUST00000095899 Il4rP16382 810 aa9.98□□□□□ -0.81
Syne1-202ENSMUST00000095899 Cc2d1aQ8K1A6 943 aa9.98□□□□□ -0.81
Syne1-202ENSMUST00000095899 Shank2Q80Z38 1476 aa9.97□□□□□ -0.81
Syne1-202ENSMUST00000095899 Slit1Q80TR4 1531 aa9.97□□□□□ -0.81
Syne1-202ENSMUST00000095899 Q3TQI7 289 aaKnown RBP9.97□□□□□ -0.81
Syne1-202ENSMUST00000095899 Rsph3aQ3UFY4 516 aa9.97□□□□□ -0.81
Syne1-202ENSMUST00000095899 Ptpdc1Q6NZK8 747 aa9.97□□□□□ -0.81
Syne1-202ENSMUST00000095899 Kat6bQ8BRB7 1872 aa9.97□□□□□ -0.81
Syne1-202ENSMUST00000095899 Tiam2Q6ZPF3 1715 aa9.97□□□□□ -0.81
Syne1-202ENSMUST00000095899 PappaQ8R4K8 1624 aa9.97□□□□□ -0.81
Syne1-202ENSMUST00000095899 Tgfb1i1Q62219 461 aa9.97□□□□□ -0.81
Syne1-202ENSMUST00000095899 Brpf1B2RRD7 1212 aa9.96□□□□□ -0.81
Syne1-202ENSMUST00000095899 Cwc27Q3TKY6 469 aa9.96□□□□□ -0.81
Syne1-202ENSMUST00000095899 Mum1Q6DID5 682 aa9.96□□□□□ -0.81
Syne1-202ENSMUST00000095899 Erc2Q6PH08 957 aa9.96□□□□□ -0.81
Syne1-202ENSMUST00000095899 Tex2Q6ZPJ0 1128 aaKnown RBP9.96□□□□□ -0.81
Syne1-202ENSMUST00000095899 TatQ8QZR1 454 aa9.96□□□□□ -0.81
Syne1-202ENSMUST00000095899 Echdc1Q9D9V3 322 aa9.96□□□□□ -0.81
Syne1-202ENSMUST00000095899 Ppm1mQ8BU27 406 aa9.96□□□□□ -0.82
Syne1-202ENSMUST00000095899 Zap70P43404 618 aa9.95□□□□□ -0.82
Syne1-202ENSMUST00000095899 Stk11ipQ3TAA7 1072 aa9.95□□□□□ -0.82
Syne1-202ENSMUST00000095899 Q9D2X8 372 aa9.95□□□□□ -0.82
Syne1-202ENSMUST00000095899 Zkscan2G3X952 960 aa9.95□□□□□ -0.82
Syne1-202ENSMUST00000095899 Fam228bQ497Q6 232 aa9.95□□□□□ -0.82
Syne1-202ENSMUST00000095899 Bag4Q8CI61 457 aa9.95□□□□□ -0.82
Syne1-202ENSMUST00000095899 Noc3lQ8VI84 807 aaKnown RBP9.95□□□□□ -0.82
Syne1-202ENSMUST00000095899 Pdzd9Q9D9M4 266 aa9.95□□□□□ -0.82
Syne1-202ENSMUST00000095899 Tnrc6cQ3UHC0 1690 aaKnown RBP9.94□□□□□ -0.82
Syne1-202ENSMUST00000095899 Pmfbp1Q9WVQ0 1022 aa9.94□□□□□ -0.82
Syne1-202ENSMUST00000095899 Abcc4E9Q236 1325 aa9.94□□□□□ -0.82
Syne1-202ENSMUST00000095899 Abca3Q8R420 1704 aa9.94□□□□□ -0.82
Syne1-202ENSMUST00000095899 Btbd11Q6GQW0 1109 aa9.94□□□□□ -0.82
Syne1-202ENSMUST00000095899 Dzip1Q8BMD2 852 aa9.94□□□□□ -0.82
Syne1-202ENSMUST00000095899 Ccdc7Q9D541 371 aa9.94□□□□□ -0.82
Syne1-202ENSMUST00000095899 Fmnl2A2APV2 1086 aa9.93□□□□□ -0.82
Syne1-202ENSMUST00000095899 GnpatP98192 678 aa9.93□□□□□ -0.82
Syne1-202ENSMUST00000095899 Paxip1Q6NZQ4 1056 aa9.93□□□□□ -0.82
Syne1-202ENSMUST00000095899 GckrQ91X44 587 aa9.93□□□□□ -0.82
Syne1-202ENSMUST00000095899 Rasa1E9PYG6 1038 aa9.93□□□□□ -0.82
Syne1-202ENSMUST00000095899 HellsQ60848 821 aa9.93□□□□□ -0.82
Syne1-202ENSMUST00000095899 Add2Q9QYB8 725 aa9.93□□□□□ -0.82
Syne1-202ENSMUST00000095899 Nom1Q3UFM5 854 aaKnown RBP9.92□□□□□ -0.82
Syne1-202ENSMUST00000095899 Rrp12Q6P5B0 1295 aaKnown RBP9.92□□□□□ -0.82
Syne1-202ENSMUST00000095899 Gdpd2Q9ESM6 539 aa9.92□□□□□ -0.82
Syne1-202ENSMUST00000095899 Iqsec3Q3TES0 1195 aa9.92□□□□□ -0.82
Syne1-202ENSMUST00000095899 Ddx17Q501J6 650 aaKnown RBP9.92□□□□□ -0.82
Syne1-202ENSMUST00000095899 Tmx3Q8BXZ1 456 aa9.92□□□□□ -0.82
Syne1-202ENSMUST00000095899 Kcnb2A6H8H5 907 aa9.92□□□□□ -0.82
Syne1-202ENSMUST00000095899 Casq1O09165 405 aa9.92□□□□□ -0.82
Syne1-202ENSMUST00000095899 SympkQ80X82 1284 aa9.92□□□□□ -0.82
Syne1-202ENSMUST00000095899 LlphQ9D945 130 aaKnown RBP9.92□□□□□ -0.82
Syne1-202ENSMUST00000095899 Gm9992B2RWK3 458 aa9.91□□□□□ -0.82
Syne1-202ENSMUST00000095899 Tnnt1O88346 262 aa9.91□□□□□ -0.82
Syne1-202ENSMUST00000095899 Hmox1P14901 289 aa9.91□□□□□ -0.82
Syne1-202ENSMUST00000095899 Anapc15P60007 132 aa9.91□□□□□ -0.82
Syne1-202ENSMUST00000095899 Unc93aQ710D3 458 aa9.91□□□□□ -0.82
Syne1-202ENSMUST00000095899 Nlrp9bQ66X22 1003 aa9.91□□□□□ -0.82
Syne1-202ENSMUST00000095899 Taf5lQ91WQ5 589 aa9.91□□□□□ -0.82
Syne1-202ENSMUST00000095899 Exoc6bA6H5Z3 810 aa9.91□□□□□ -0.82
Syne1-202ENSMUST00000095899 Elmsan1E9Q2I4 1089 aaKnown RBP9.91□□□□□ -0.82
Syne1-202ENSMUST00000095899 Spryd3E9Q9B3 442 aa9.91□□□□□ -0.82
Syne1-202ENSMUST00000095899 Zkscan1Q8BGS3 561 aaKnown RBP9.91□□□□□ -0.82
Syne1-202ENSMUST00000095899 Hoxa7P02830 229 aa9.9□□□□□ -0.82
Syne1-202ENSMUST00000095899 Map3k2Q61083 619 aa9.9□□□□□ -0.82
Syne1-202ENSMUST00000095899 ThemisQ8BGW0 636 aa9.9□□□□□ -0.82
Syne1-202ENSMUST00000095899 OptnQ8K3K8 584 aa9.9□□□□□ -0.82
Syne1-202ENSMUST00000095899 Fkbp4P30416 458 aa9.9□□□□□ -0.82
Syne1-202ENSMUST00000095899 PogkQ80TC5 607 aa9.9□□□□□ -0.82
Syne1-202ENSMUST00000095899 Tshz3Q8CGV9 1081 aa9.9□□□□□ -0.82
Syne1-202ENSMUST00000095899 Taf7Q9R1C0 341 aa9.9□□□□□ -0.82
Syne1-202ENSMUST00000095899 Rad50P70388 1312 aa9.9□□□□□ -0.83
Syne1-202ENSMUST00000095899 CrklP47941 303 aa9.89□□□□□ -0.83
Syne1-202ENSMUST00000095899 Clcn1Q64347 994 aa9.89□□□□□ -0.83
Syne1-202ENSMUST00000095899 Nol11Q8BJW5 723 aaKnown RBP9.89□□□□□ -0.83
Syne1-202ENSMUST00000095899 Phkg2Q9DB30 406 aa9.89□□□□□ -0.83
Syne1-202ENSMUST00000095899 Mlh1Q9JK91 760 aa9.89□□□□□ -0.83
Syne1-202ENSMUST00000095899 Ric1Q69ZJ7 1422 aa9.89□□□□□ -0.83
Syne1-202ENSMUST00000095899 Ttll7A4Q9F0 912 aa9.89□□□□□ -0.83
Syne1-202ENSMUST00000095899 Hspa1lP16627 641 aa9.89□□□□□ -0.83
Syne1-202ENSMUST00000095899 Card10P58660 1021 aa9.89□□□□□ -0.83
Syne1-202ENSMUST00000095899 Tpm2P58774 284 aa9.89□□□□□ -0.83
Syne1-202ENSMUST00000095899 EspnlQ3UYR4 1005 aa9.89□□□□□ -0.83
Syne1-202ENSMUST00000095899 Utp18Q5SSI6 552 aaKnown RBP9.89□□□□□ -0.83
Syne1-202ENSMUST00000095899 Ccdc155Q80VJ8 648 aa9.89□□□□□ -0.83
Syne1-202ENSMUST00000095899 E4f1Q8CCE9 783 aa9.89□□□□□ -0.83
Syne1-202ENSMUST00000095899 Nhsl1Q8CAF4 1587 aa9.88□□□□□ -0.83
Syne1-202ENSMUST00000095899 Gm45015A0A140LII9 184 aa9.88□□□□□ -0.83
Syne1-202ENSMUST00000095899 Gm18336A0A140LIU8 765 aa9.88□□□□□ -0.83
Syne1-202ENSMUST00000095899 Cct4P80315 539 aaKnown RBP9.88□□□□□ -0.83
Retrieved 100 of 22,080 RNA–protein pairs in 100.1 ms