RNA–Protein interactions for RNA: ENSMUST00000092215.5

Ccdc38-201, Transcript of Coiled-coil domain-containing protein 38, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc38, Length 3,656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38-201ENSMUST00000092215 Duxf3A0A0N4SV92 674 aa12.48□□□□□ -0.41
Ccdc38-201ENSMUST00000092215 Ankrd44B2RXR6 993 aa12.48□□□□□ -0.41
Ccdc38-201ENSMUST00000092215 Ankle2Q6P1H6 964 aa12.48□□□□□ -0.41
Ccdc38-201ENSMUST00000092215 Mast2Q60592 1734 aa12.48□□□□□ -0.41
Ccdc38-201ENSMUST00000092215 Nsfl1cQ9CZ44 370 aaKnown RBP12.48□□□□□ -0.41
Ccdc38-201ENSMUST00000092215 Kiaa0319lQ8K135 1048 aa12.47□□□□□ -0.41
Ccdc38-201ENSMUST00000092215 Pim2Q62070 370 aa12.47□□□□□ -0.41
Ccdc38-201ENSMUST00000092215 Prkar2bP31324 416 aa12.47□□□□□ -0.41
Ccdc38-201ENSMUST00000092215 Igflr1Q3U4N7 345 aa12.47□□□□□ -0.41
Ccdc38-201ENSMUST00000092215 B4galnt3Q6L8S8 986 aa12.47□□□□□ -0.41
Ccdc38-201ENSMUST00000092215 Wdr43Q6ZQL4 677 aaKnown RBP12.47□□□□□ -0.41
Ccdc38-201ENSMUST00000092215 Gm13023A2A8N2 498 aa12.46□□□□□ -0.42
Ccdc38-201ENSMUST00000092215 BcanQ61361 883 aa12.46□□□□□ -0.42
Ccdc38-201ENSMUST00000092215 Fkbp5Q64378 456 aa12.46□□□□□ -0.42
Ccdc38-201ENSMUST00000092215 Slf2Q6P9P0 1278 aa12.46□□□□□ -0.42
Ccdc38-201ENSMUST00000092215 Prkrip1Q9CWV6 186 aaKnown RBP12.46□□□□□ -0.42
Ccdc38-201ENSMUST00000092215 Lmbr1lQ9D1E5 489 aa12.46□□□□□ -0.42
Ccdc38-201ENSMUST00000092215 Mylk2Q8VCR8 613 aa12.46□□□□□ -0.42
Ccdc38-201ENSMUST00000092215 Slc4a10Q5DTL9 1118 aa12.45□□□□□ -0.42
Ccdc38-201ENSMUST00000092215 Soga3Q6NZL0 945 aa12.45□□□□□ -0.42
Ccdc38-201ENSMUST00000092215 Gnl3lQ6PGG6 577 aaKnown RBP12.45□□□□□ -0.42
Ccdc38-201ENSMUST00000092215 Nlrp3Q8R4B8 1033 aa12.45□□□□□ -0.42
Ccdc38-201ENSMUST00000092215 Kat6bQ8BRB7 1872 aa12.45□□□□□ -0.42
Ccdc38-201ENSMUST00000092215 Gigyf1Q99MR1 1044 aaKnown RBP12.45□□□□□ -0.42
Ccdc38-201ENSMUST00000092215 Chmp4bQ9D8B3 224 aaKnown RBP12.45□□□□□ -0.42
Ccdc38-201ENSMUST00000092215 NmiO35309 314 aa12.44□□□□□ -0.42
Ccdc38-201ENSMUST00000092215 Jarid2Q62315 1234 aa12.44□□□□□ -0.42
Ccdc38-201ENSMUST00000092215 CanxP35564 591 aaKnown RBP12.43□□□□□ -0.42
Ccdc38-201ENSMUST00000092215 Snapc4Q8BP86 1333 aa12.43□□□□□ -0.42
Ccdc38-201ENSMUST00000092215 Adcy9P51830 1353 aa12.43□□□□□ -0.42
Ccdc38-201ENSMUST00000092215 Gnai2P08752 355 aaKnown RBP12.43□□□□□ -0.42
Ccdc38-201ENSMUST00000092215 Vars2Q3U2A8 1060 aa12.43□□□□□ -0.42
Ccdc38-201ENSMUST00000092215 Bend3Q6PAL0 825 aa12.43□□□□□ -0.42
Ccdc38-201ENSMUST00000092215 Ttc19Q8CC21 365 aa12.43□□□□□ -0.42
Ccdc38-201ENSMUST00000092215 Trim52Q8CDV4 233 aa12.43□□□□□ -0.42
Ccdc38-201ENSMUST00000092215 Prr5lA2AVJ5 370 aa12.42□□□□□ -0.42
Ccdc38-201ENSMUST00000092215 Myd88P22366 296 aa12.42□□□□□ -0.42
Ccdc38-201ENSMUST00000092215 NgdnQ9DB96 315 aaKnown RBP12.42□□□□□ -0.42
Ccdc38-201ENSMUST00000092215 Cwc27Q3TKY6 469 aa12.42□□□□□ -0.42
Ccdc38-201ENSMUST00000092215 Esco1Q69Z69 843 aa12.42□□□□□ -0.42
Ccdc38-201ENSMUST00000092215 Msl1Q6PDM1 616 aa12.42□□□□□ -0.42
Ccdc38-201ENSMUST00000092215 Stard3nlQ9DCI3 235 aa12.42□□□□□ -0.42
Ccdc38-201ENSMUST00000092215 Ifit1bl2Q3U687 466 aa12.41□□□□□ -0.42
Ccdc38-201ENSMUST00000092215 Zbtb40Q6PCS8 1258 aa12.41□□□□□ -0.42
Ccdc38-201ENSMUST00000092215 Trip6Q9Z1Y4 480 aa12.41□□□□□ -0.42
Ccdc38-201ENSMUST00000092215 Rlbp1Q9Z275 317 aa12.41□□□□□ -0.42
Ccdc38-201ENSMUST00000092215 Supt16hQ920B9 1047 aa12.41□□□□□ -0.42
Ccdc38-201ENSMUST00000092215 RtcbQ99LF4 505 aaKnown RBP12.41□□□□□ -0.42
Ccdc38-201ENSMUST00000092215 Ddx58Q6Q899 926 aa12.41□□□□□ -0.42
Ccdc38-201ENSMUST00000092215 GptQ8QZR5 496 aa12.41□□□□□ -0.42
Ccdc38-201ENSMUST00000092215 Cers3Q1A3B0 383 aa12.4□□□□□ -0.42
Ccdc38-201ENSMUST00000092215 Trim34aQ99PP6 485 aa12.4□□□□□ -0.42
Ccdc38-201ENSMUST00000092215 Dctn1O08788 1281 aa12.4□□□□□ -0.42
Ccdc38-201ENSMUST00000092215 Tlr7P58681 1050 aa12.4□□□□□ -0.42
Ccdc38-201ENSMUST00000092215 Morc2aQ69ZX6 1030 aa12.4□□□□□ -0.42
Ccdc38-201ENSMUST00000092215 Srgap3Q812A2 1099 aa12.4□□□□□ -0.42
Ccdc38-201ENSMUST00000092215 Flt4P35917 1363 aa12.4□□□□□ -0.42
Ccdc38-201ENSMUST00000092215 Grm8P47743 908 aa12.4□□□□□ -0.43
Ccdc38-201ENSMUST00000092215 Atp1b3P97370 278 aa12.4□□□□□ -0.43
Ccdc38-201ENSMUST00000092215 Lrrc43Q3V0L5 667 aa12.4□□□□□ -0.43
Ccdc38-201ENSMUST00000092215 Srp68Q8BMA6 625 aaKnown RBP12.4□□□□□ -0.43
Ccdc38-201ENSMUST00000092215 Chmp5Q9D7S9 219 aa12.4□□□□□ -0.43
Ccdc38-201ENSMUST00000092215 Sart3Q9JLI8 962 aaKnown RBP12.4□□□□□ -0.43
Ccdc38-201ENSMUST00000092215 Mapk8ip1Q9WVI9 707 aa12.4□□□□□ -0.43
Ccdc38-201ENSMUST00000092215 Dlg5E9Q9R9 1921 aa12.39□□□□□ -0.43
Ccdc38-201ENSMUST00000092215 MypnQ5DTJ9 1315 aa12.39□□□□□ -0.43
Ccdc38-201ENSMUST00000092215 Erbb4Q61527 1308 aa12.39□□□□□ -0.43
Ccdc38-201ENSMUST00000092215 AU019823E9PUQ3 292 aa12.39□□□□□ -0.43
Ccdc38-201ENSMUST00000092215 HnrnpuQ8VEK3 800 aaKnown RBP12.39□□□□□ -0.43
Ccdc38-201ENSMUST00000092215 Chmp3Q9CQ10 224 aa12.39□□□□□ -0.43
Ccdc38-201ENSMUST00000092215 Cwc25Q9DBF7 416 aa12.39□□□□□ -0.43
Ccdc38-201ENSMUST00000092215 Sos2Q02384 1333 aa12.38□□□□□ -0.43
Ccdc38-201ENSMUST00000092215 Ppp1r42Q8R1Z4 357 aa12.38□□□□□ -0.43
Ccdc38-201ENSMUST00000092215 Tceal9Q9DD24 104 aa12.38□□□□□ -0.43
Ccdc38-201ENSMUST00000092215 GpkowQ56A08 488 aa12.38□□□□□ -0.43
Ccdc38-201ENSMUST00000092215 Tktl2Q9D4D4 627 aa12.38□□□□□ -0.43
Ccdc38-201ENSMUST00000092215 Ubr2Q6WKZ8 1755 aa12.38□□□□□ -0.43
Ccdc38-201ENSMUST00000092215 Znf521Q6KAS7 1311 aa12.38□□□□□ -0.43
Ccdc38-201ENSMUST00000092215 Ccdc85cE9Q6B2 420 aa12.38□□□□□ -0.43
Ccdc38-201ENSMUST00000092215 Ppm1mQ8BU27 406 aa12.38□□□□□ -0.43
Ccdc38-201ENSMUST00000092215 HmcesQ8R1M0 353 aaKnown RBP12.38□□□□□ -0.43
Ccdc38-201ENSMUST00000092215 Ltb4r2Q9JJL9 360 aa12.38□□□□□ -0.43
Ccdc38-201ENSMUST00000092215 Tjp1P39447 1745 aaKnown RBP12.37□□□□□ -0.43
Ccdc38-201ENSMUST00000092215 Tlr8P58682 1032 aa12.37□□□□□ -0.43
Ccdc38-201ENSMUST00000092215 Nol10Q5RJG1 687 aaKnown RBP12.37□□□□□ -0.43
Ccdc38-201ENSMUST00000092215 Col4a1P02463 1669 aa12.37□□□□□ -0.43
Ccdc38-201ENSMUST00000092215 MetP16056 1379 aa12.37□□□□□ -0.43
Ccdc38-201ENSMUST00000092215 AppP12023 770 aa12.37□□□□□ -0.43
Ccdc38-201ENSMUST00000092215 Pde4bB1AWC9 736 aa12.36□□□□□ -0.43
Ccdc38-201ENSMUST00000092215 Tiam2Q6ZPF3 1715 aa12.36□□□□□ -0.43
Ccdc38-201ENSMUST00000092215 Jdp2P97875 163 aa12.36□□□□□ -0.43
Ccdc38-201ENSMUST00000092215 Eif3aP23116 1344 aaKnown RBP12.36□□□□□ -0.43
Ccdc38-201ENSMUST00000092215 Cyp2c23E9Q5K4 494 aa12.36□□□□□ -0.43
Ccdc38-201ENSMUST00000092215 HellsQ60848 821 aa12.36□□□□□ -0.43
Ccdc38-201ENSMUST00000092215 Smarca5Q91ZW3 1051 aaKnown RBP12.36□□□□□ -0.43
Ccdc38-201ENSMUST00000092215 Ccdc146E9Q9F7 977 aa12.35□□□□□ -0.43
Ccdc38-201ENSMUST00000092215 Pa2g4P50580 394 aaKnown RBP12.35□□□□□ -0.43
Ccdc38-201ENSMUST00000092215 Fam13aQ8BGI4 693 aa12.35□□□□□ -0.43
Ccdc38-201ENSMUST00000092215 Aldh1l2Q8K009 923 aa12.35□□□□□ -0.43
Ccdc38-201ENSMUST00000092215 Akt1s1Q9D1F4 257 aa12.35□□□□□ -0.43
Retrieved 100 of 22,080 RNA–protein pairs in 30.4 ms