RNA–Protein interactions for RNA: ENSMUST00000071898.5

Cpsf1-201, Transcript of Cleavage and polyadenylation specificity factor subunit 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cpsf1, Length 4,515 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf1-201ENSMUST00000071898 Jdp2P97875 163 aa11.85□□□□□ -0.51
Cpsf1-201ENSMUST00000071898 Bicd2Q921C5 820 aa11.85□□□□□ -0.51
Cpsf1-201ENSMUST00000071898 Zcrb1Q9CZ96 217 aaKnown RBP11.85□□□□□ -0.51
Cpsf1-201ENSMUST00000071898 Iqgap1Q9JKF1 1657 aaKnown RBP11.85□□□□□ -0.51
Cpsf1-201ENSMUST00000071898 Trim34bJ3QNR8 485 aa11.85□□□□□ -0.51
Cpsf1-201ENSMUST00000071898 Aplp1Q03157 653 aa11.85□□□□□ -0.51
Cpsf1-201ENSMUST00000071898 PtpruB1AUH1 1446 aa11.84□□□□□ -0.51
Cpsf1-201ENSMUST00000071898 Trim30aP15533 496 aa11.84□□□□□ -0.51
Cpsf1-201ENSMUST00000071898 Map3k13Q1HKZ5 959 aa11.84□□□□□ -0.51
Cpsf1-201ENSMUST00000071898 Ano8Q6PB70 1060 aa11.84□□□□□ -0.51
Cpsf1-201ENSMUST00000071898 Ankrd23Q812A3 306 aa11.84□□□□□ -0.51
Cpsf1-201ENSMUST00000071898 Phf14Q9D4H9 881 aa11.84□□□□□ -0.51
Cpsf1-201ENSMUST00000071898 Nid2O88322 1403 aa11.84□□□□□ -0.51
Cpsf1-201ENSMUST00000071898 Klhdc4Q921I2 584 aa11.84□□□□□ -0.51
Cpsf1-201ENSMUST00000071898 Phkg2Q9DB30 406 aa11.84□□□□□ -0.51
Cpsf1-201ENSMUST00000071898 Adamts13Q769J6 1426 aa11.84□□□□□ -0.51
Cpsf1-201ENSMUST00000071898 Fkbp5Q64378 456 aa11.84□□□□□ -0.51
Cpsf1-201ENSMUST00000071898 TnrQ8BYI9 1358 aa11.84□□□□□ -0.51
Cpsf1-201ENSMUST00000071898 Terf2O35144 541 aa11.83□□□□□ -0.51
Cpsf1-201ENSMUST00000071898 Mcm4P49717 862 aa11.83□□□□□ -0.51
Cpsf1-201ENSMUST00000071898 Ppp1r42Q8R1Z4 357 aa11.83□□□□□ -0.51
Cpsf1-201ENSMUST00000071898 Psma5Q9Z2U1 241 aaKnown RBP11.83□□□□□ -0.51
Cpsf1-201ENSMUST00000071898 Tpm3-rs7D3Z2H9 248 aa11.83□□□□□ -0.52
Cpsf1-201ENSMUST00000071898 Kiaa0754Q69ZZ9 979 aa11.83□□□□□ -0.52
Cpsf1-201ENSMUST00000071898 Q9D9S1 216 aa11.83□□□□□ -0.52
Cpsf1-201ENSMUST00000071898 Fam135bQ9DAI6 1403 aa11.83□□□□□ -0.52
Cpsf1-201ENSMUST00000071898 Nkx1-2P42580 305 aa11.83□□□□□ -0.52
Cpsf1-201ENSMUST00000071898 Eif3aP23116 1344 aaKnown RBP11.83□□□□□ -0.52
Cpsf1-201ENSMUST00000071898 Hoxa7P02830 229 aa11.82□□□□□ -0.52
Cpsf1-201ENSMUST00000071898 Ifit1bl2Q3U687 466 aa11.82□□□□□ -0.52
Cpsf1-201ENSMUST00000071898 Rbm26Q6NZN0 1012 aaKnown RBP11.82□□□□□ -0.52
Cpsf1-201ENSMUST00000071898 Cep170bQ80U49 1574 aa11.82□□□□□ -0.52
Cpsf1-201ENSMUST00000071898 ArsiQ32KI9 573 aa11.82□□□□□ -0.52
Cpsf1-201ENSMUST00000071898 Trim28Q62318 834 aa11.82□□□□□ -0.52
Cpsf1-201ENSMUST00000071898 Fbxo41Q6NS60 873 aa11.82□□□□□ -0.52
Cpsf1-201ENSMUST00000071898 Dip2bQ3UH60 1574 aa11.82□□□□□ -0.52
Cpsf1-201ENSMUST00000071898 Ankrd50F7BE84 1390 aa11.81□□□□□ -0.52
Cpsf1-201ENSMUST00000071898 AU019823E9PUQ3 292 aa11.81□□□□□ -0.52
Cpsf1-201ENSMUST00000071898 Sparcl1P70663 650 aa11.81□□□□□ -0.52
Cpsf1-201ENSMUST00000071898 Pard3Q99NH2 1333 aa11.81□□□□□ -0.52
Cpsf1-201ENSMUST00000071898 Ccdc173A0JLY1 547 aa11.81□□□□□ -0.52
Cpsf1-201ENSMUST00000071898 FosbP13346 338 aa11.81□□□□□ -0.52
Cpsf1-201ENSMUST00000071898 Ccdc47Q9D024 483 aaKnown RBP11.81□□□□□ -0.52
Cpsf1-201ENSMUST00000071898 Sytl4Q9R0Q1 673 aa11.81□□□□□ -0.52
Cpsf1-201ENSMUST00000071898 Ino80Q6ZPV2 1559 aa11.81□□□□□ -0.52
Cpsf1-201ENSMUST00000071898 Ankle2Q6P1H6 964 aa11.81□□□□□ -0.52
Cpsf1-201ENSMUST00000071898 Rlbp1Q9Z275 317 aa11.81□□□□□ -0.52
Cpsf1-201ENSMUST00000071898 Vamp4O70480 141 aa11.8□□□□□ -0.52
Cpsf1-201ENSMUST00000071898 Mrvi1Q9WUX5 899 aaKnown RBP11.8□□□□□ -0.52
Cpsf1-201ENSMUST00000071898 Brd1E9PZ26 1189 aaKnown RBP11.8□□□□□ -0.52
Cpsf1-201ENSMUST00000071898 Babam1Q3UI43 333 aa11.8□□□□□ -0.52
Cpsf1-201ENSMUST00000071898 Trim27Q62158 513 aa11.8□□□□□ -0.52
Cpsf1-201ENSMUST00000071898 Nrxn3Q6P9K9 1571 aa11.8□□□□□ -0.52
Cpsf1-201ENSMUST00000071898 Anapc15-psA0A140T8L6 141 aa11.8□□□□□ -0.52
Cpsf1-201ENSMUST00000071898 Top1mtQ8R4U6 593 aa11.8□□□□□ -0.52
Cpsf1-201ENSMUST00000071898 Taf7Q9R1C0 341 aa11.8□□□□□ -0.52
Cpsf1-201ENSMUST00000071898 Cplx2P84086 134 aa11.79□□□□□ -0.52
Cpsf1-201ENSMUST00000071898 Pdzd9Q9D9M4 266 aa11.79□□□□□ -0.52
Cpsf1-201ENSMUST00000071898 Bcar3Q9QZK2 820 aa11.79□□□□□ -0.52
Cpsf1-201ENSMUST00000071898 Ppfibp2O35711 882 aa11.79□□□□□ -0.52
Cpsf1-201ENSMUST00000071898 Tpd52l1O54818 204 aa11.79□□□□□ -0.52
Cpsf1-201ENSMUST00000071898 Prim1P20664 417 aa11.79□□□□□ -0.52
Cpsf1-201ENSMUST00000071898 Srek1Q8BZX4 494 aaKnown RBP11.79□□□□□ -0.52
Cpsf1-201ENSMUST00000071898 GckrQ91X44 587 aa11.79□□□□□ -0.52
Cpsf1-201ENSMUST00000071898 RtcbQ99LF4 505 aaKnown RBP11.79□□□□□ -0.52
Cpsf1-201ENSMUST00000071898 Asic4Q7TNS7 539 aa11.79□□□□□ -0.52
Cpsf1-201ENSMUST00000071898 Prr29B1ARI9 187 aa11.79□□□□□ -0.52
Cpsf1-201ENSMUST00000071898 Ccdc85cE9Q6B2 420 aa11.79□□□□□ -0.52
Cpsf1-201ENSMUST00000071898 Lrrc43Q3V0L5 667 aa11.79□□□□□ -0.52
Cpsf1-201ENSMUST00000071898 Irf9Q61179 399 aa11.79□□□□□ -0.52
Cpsf1-201ENSMUST00000071898 Brd2Q7JJ13 798 aaKnown RBP11.79□□□□□ -0.52
Cpsf1-201ENSMUST00000071898 Klf15Q9EPW2 415 aa11.79□□□□□ -0.52
Cpsf1-201ENSMUST00000071898 ScaperF8VQ70 1398 aaKnown RBP11.79□□□□□ -0.52
Cpsf1-201ENSMUST00000071898 LifrP42703 1092 aa11.78□□□□□ -0.52
Cpsf1-201ENSMUST00000071898 Plcd3Q8K2J0 785 aa11.78□□□□□ -0.52
Cpsf1-201ENSMUST00000071898 Alpk3Q924C5 1678 aa11.78□□□□□ -0.52
Cpsf1-201ENSMUST00000071898 Nol8Q3UHX0 1147 aaKnown RBP11.78□□□□□ -0.52
Cpsf1-201ENSMUST00000071898 Ddx58Q6Q899 926 aa11.78□□□□□ -0.52
Cpsf1-201ENSMUST00000071898 Fam13aQ8BGI4 693 aa11.78□□□□□ -0.52
Cpsf1-201ENSMUST00000071898 Miga2Q8BK03 593 aa11.78□□□□□ -0.52
Cpsf1-201ENSMUST00000071898 Trpm1Q2TV84 1622 aa11.78□□□□□ -0.52
Cpsf1-201ENSMUST00000071898 Uhrf1bp1lA2RSJ4 1457 aa11.78□□□□□ -0.52
Cpsf1-201ENSMUST00000071898 NppbP40753 121 aa11.78□□□□□ -0.52
Cpsf1-201ENSMUST00000071898 Kiaa0319Q5SZV5 1081 aa11.78□□□□□ -0.52
Cpsf1-201ENSMUST00000071898 Bsdc1Q80Y55 427 aa11.78□□□□□ -0.52
Cpsf1-201ENSMUST00000071898 FanclQ9CR14 375 aa11.78□□□□□ -0.52
Cpsf1-201ENSMUST00000071898 Dhx16G3X8X0 1044 aaKnown RBP11.78□□□□□ -0.52
Cpsf1-201ENSMUST00000071898 EappQ5BU09 281 aa11.78□□□□□ -0.52
Cpsf1-201ENSMUST00000071898 NaspQ99MD9 773 aaKnown RBP11.78□□□□□ -0.52
Cpsf1-201ENSMUST00000071898 Myd88P22366 296 aa11.77□□□□□ -0.52
Cpsf1-201ENSMUST00000071898 Cavin2Q63918 418 aaKnown RBP11.77□□□□□ -0.52
Cpsf1-201ENSMUST00000071898 Catsper2A2ARP9 588 aa11.77□□□□□ -0.53
Cpsf1-201ENSMUST00000071898 Noc3lQ8VI84 807 aaKnown RBP11.77□□□□□ -0.53
Cpsf1-201ENSMUST00000071898 Ell2Q3UKU1 639 aa11.77□□□□□ -0.53
Cpsf1-201ENSMUST00000071898 Ttc5Q99LG4 440 aa11.77□□□□□ -0.53
Cpsf1-201ENSMUST00000071898 Cdk12Q14AX6 1484 aaKnown RBP11.76□□□□□ -0.53
Cpsf1-201ENSMUST00000071898 Cct4P80315 539 aaKnown RBP11.76□□□□□ -0.53
Cpsf1-201ENSMUST00000071898 Soga3Q6NZL0 945 aa11.76□□□□□ -0.53
Cpsf1-201ENSMUST00000071898 Znf771Q8BJ90 317 aa11.76□□□□□ -0.53
Cpsf1-201ENSMUST00000071898 Brf1Q8CFK2 676 aa11.76□□□□□ -0.53
Retrieved 100 of 22,080 RNA–protein pairs in 32.6 ms