RNA–Protein interactions for RNA: ENSMUST00000054588.14

Col9a1-201, Transcript of Collagen alpha-1(IX) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col9a1, Length 3,834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1-201ENSMUST00000054588 Clcn1Q64347 994 aa12.96□□□□□ -0.33
Col9a1-201ENSMUST00000054588 Gripap1Q8VD04 806 aa12.96□□□□□ -0.33
Col9a1-201ENSMUST00000054588 Atp8b2P98199 1209 aa12.96□□□□□ -0.34
Col9a1-201ENSMUST00000054588 Ltv1Q6NSQ7 470 aaKnown RBP12.96□□□□□ -0.34
Col9a1-201ENSMUST00000054588 Tceanc2Q8R2M0 207 aa12.96□□□□□ -0.34
Col9a1-201ENSMUST00000054588 TefQ9JLC6 301 aa12.96□□□□□ -0.34
Col9a1-201ENSMUST00000054588 Stk36Q69ZM6 1316 aa12.96□□□□□ -0.34
Col9a1-201ENSMUST00000054588 Pik3c2bE9QAN8 1632 aa12.95□□□□□ -0.34
Col9a1-201ENSMUST00000054588 Mmp8O70138 465 aa12.95□□□□□ -0.34
Col9a1-201ENSMUST00000054588 VgfQ0VGU4 617 aa12.95□□□□□ -0.34
Col9a1-201ENSMUST00000054588 TkfcQ8VC30 578 aa12.95□□□□□ -0.34
Col9a1-201ENSMUST00000054588 RestQ8VIG1 1082 aa12.95□□□□□ -0.34
Col9a1-201ENSMUST00000054588 Hoxc9P09633 260 aa12.95□□□□□ -0.34
Col9a1-201ENSMUST00000054588 Tpm2P58774 284 aa12.95□□□□□ -0.34
Col9a1-201ENSMUST00000054588 Smg7Q5RJH6 1138 aaKnown RBP12.95□□□□□ -0.34
Col9a1-201ENSMUST00000054588 Map3k2Q61083 619 aa12.95□□□□□ -0.34
Col9a1-201ENSMUST00000054588 Pdcl2Q78Y63 240 aa12.95□□□□□ -0.34
Col9a1-201ENSMUST00000054588 Pknox2Q8BG99 474 aa12.95□□□□□ -0.34
Col9a1-201ENSMUST00000054588 TimelessQ9R1X4 1197 aa12.95□□□□□ -0.34
Col9a1-201ENSMUST00000054588 Med1Q925J9 1575 aa12.94□□□□□ -0.34
Col9a1-201ENSMUST00000054588 Strn4P58404 760 aa12.94□□□□□ -0.34
Col9a1-201ENSMUST00000054588 Il1rapl2Q9ERS6 686 aa12.94□□□□□ -0.34
Col9a1-201ENSMUST00000054588 PsapQ61207 557 aaKnown RBP12.94□□□□□ -0.34
Col9a1-201ENSMUST00000054588 Becn1O88597 448 aa12.94□□□□□ -0.34
Col9a1-201ENSMUST00000054588 Ercc3P49135 783 aa12.94□□□□□ -0.34
Col9a1-201ENSMUST00000054588 Brf1Q8CFK2 676 aa12.93□□□□□ -0.34
Col9a1-201ENSMUST00000054588 Adgrb1Q3UHD1 1582 aa12.93□□□□□ -0.34
Col9a1-201ENSMUST00000054588 Pde3bQ61409 1100 aa12.93□□□□□ -0.34
Col9a1-201ENSMUST00000054588 Edc3Q8K2D3 508 aaKnown RBP12.93□□□□□ -0.34
Col9a1-201ENSMUST00000054588 Pof1bQ8K4L4 587 aa12.93□□□□□ -0.34
Col9a1-201ENSMUST00000054588 Slc26a8Q8R0C3 999 aa12.93□□□□□ -0.34
Col9a1-201ENSMUST00000054588 Txnrd1Q9JMH6 613 aa12.93□□□□□ -0.34
Col9a1-201ENSMUST00000054588 Gm45015A0A140LII9 184 aa12.93□□□□□ -0.34
Col9a1-201ENSMUST00000054588 Gm18336A0A140LIU8 765 aa12.93□□□□□ -0.34
Col9a1-201ENSMUST00000054588 Mcmdc2E9Q956 681 aa12.93□□□□□ -0.34
Col9a1-201ENSMUST00000054588 Scaf1Q5U4C3 1256 aaKnown RBP12.93□□□□□ -0.34
Col9a1-201ENSMUST00000054588 Ankib1Q6ZPS6 1085 aa12.93□□□□□ -0.34
Col9a1-201ENSMUST00000054588 Foxp4Q9DBY0 795 aaKnown RBP12.93□□□□□ -0.34
Col9a1-201ENSMUST00000054588 Slit3Q9WVB4 1523 aa12.93□□□□□ -0.34
Col9a1-201ENSMUST00000054588 Pcdh10E9PXQ7 1057 aa12.92□□□□□ -0.34
Col9a1-201ENSMUST00000054588 Vwa3bJ9JI28 736 aa12.92□□□□□ -0.34
Col9a1-201ENSMUST00000054588 VeztQ3ZK22 780 aa12.92□□□□□ -0.34
Col9a1-201ENSMUST00000054588 Ints3Q7TPD0 1041 aaKnown RBP12.92□□□□□ -0.34
Col9a1-201ENSMUST00000054588 Prune1Q8BIW1 454 aa12.92□□□□□ -0.34
Col9a1-201ENSMUST00000054588 Slain2Q8CI08 581 aa12.92□□□□□ -0.34
Col9a1-201ENSMUST00000054588 Slit2Q9R1B9 1521 aa12.92□□□□□ -0.34
Col9a1-201ENSMUST00000054588 IghaA0A0A6YXW6 389 aa12.92□□□□□ -0.34
Col9a1-201ENSMUST00000054588 Ddx19aQ61655 478 aaKnown RBP12.92□□□□□ -0.34
Col9a1-201ENSMUST00000054588 Rrs1Q9CYH6 365 aaKnown RBP12.92□□□□□ -0.34
Col9a1-201ENSMUST00000054588 FancaQ9JL70 1439 aa12.92□□□□□ -0.34
Col9a1-201ENSMUST00000054588 Samd1D3YXK1 519 aa12.92□□□□□ -0.34
Col9a1-201ENSMUST00000054588 GpkowQ56A08 488 aa12.92□□□□□ -0.34
Col9a1-201ENSMUST00000054588 Gdpd2Q9ESM6 539 aa12.92□□□□□ -0.34
Col9a1-201ENSMUST00000054588 Rreb1Q3UH06 1700 aaKnown RBP12.91□□□□□ -0.34
Col9a1-201ENSMUST00000054588 Hspa2P17156 633 aa12.91□□□□□ -0.34
Col9a1-201ENSMUST00000054588 PnnO35691 725 aaKnown RBP12.91□□□□□ -0.34
Col9a1-201ENSMUST00000054588 Gpatch11Q3UFS4 262 aa12.91□□□□□ -0.34
Col9a1-201ENSMUST00000054588 ApobrQ8VBT6 942 aa12.9□□□□□ -0.34
Col9a1-201ENSMUST00000054588 Kcnh5Q920E3 988 aa12.9□□□□□ -0.34
Col9a1-201ENSMUST00000054588 Rims2Q9EQZ7 1530 aa12.9□□□□□ -0.34
Col9a1-201ENSMUST00000054588 Syce3B5KM66 88 aa12.9□□□□□ -0.34
Col9a1-201ENSMUST00000054588 EvcP57680 1005 aa12.9□□□□□ -0.34
Col9a1-201ENSMUST00000054588 Prkab2Q6PAM0 271 aa12.9□□□□□ -0.34
Col9a1-201ENSMUST00000054588 Slc5a1Q8C3K6 665 aa12.9□□□□□ -0.34
Col9a1-201ENSMUST00000054588 Zbtb3Q91X45 518 aa12.9□□□□□ -0.34
Col9a1-201ENSMUST00000054588 Chrna2Q91X60 512 aa12.9□□□□□ -0.34
Col9a1-201ENSMUST00000054588 Atf5O70191 283 aa12.89□□□□□ -0.35
Col9a1-201ENSMUST00000054588 Zdhhc9P59268 364 aa12.89□□□□□ -0.35
Col9a1-201ENSMUST00000054588 Soga3Q6NZL0 945 aa12.89□□□□□ -0.35
Col9a1-201ENSMUST00000054588 Kdm4aQ8BW72 1064 aa12.89□□□□□ -0.35
Col9a1-201ENSMUST00000054588 LratQ9JI60 231 aa12.89□□□□□ -0.35
Col9a1-201ENSMUST00000054588 Cct4P80315 539 aaKnown RBP12.89□□□□□ -0.35
Col9a1-201ENSMUST00000054588 Arhgef1Q61210 920 aaKnown RBP12.89□□□□□ -0.35
Col9a1-201ENSMUST00000054588 Smc3Q9CW03 1217 aaKnown RBP12.89□□□□□ -0.35
Col9a1-201ENSMUST00000054588 Cyb5rlB1AS42 316 aa12.88□□□□□ -0.35
Col9a1-201ENSMUST00000054588 Nol11Q8BJW5 723 aaKnown RBP12.88□□□□□ -0.35
Col9a1-201ENSMUST00000054588 Lmbr1lQ9D1E5 489 aa12.88□□□□□ -0.35
Col9a1-201ENSMUST00000054588 Zbtb22Q9Z0G7 638 aa12.88□□□□□ -0.35
Col9a1-201ENSMUST00000054588 Dhx16G3X8X0 1044 aaKnown RBP12.88□□□□□ -0.35
Col9a1-201ENSMUST00000054588 Disp3A3KFU9 1347 aa12.88□□□□□ -0.35
Col9a1-201ENSMUST00000054588 Bicdl1A0JNT9 577 aa12.88□□□□□ -0.35
Col9a1-201ENSMUST00000054588 Sf3b2Q3UJB0 878 aaKnown RBP12.88□□□□□ -0.35
Col9a1-201ENSMUST00000054588 Adam1aQ60813 791 aa12.88□□□□□ -0.35
Col9a1-201ENSMUST00000054588 Ptpn23Q6PB44 1692 aa12.87□□□□□ -0.35
Col9a1-201ENSMUST00000054588 Msh6P54276 1358 aaKnown RBP12.87□□□□□ -0.35
Col9a1-201ENSMUST00000054588 Ccdc173A0JLY1 547 aa12.87□□□□□ -0.35
Col9a1-201ENSMUST00000054588 Wdr78E9PYY5 807 aa12.87□□□□□ -0.35
Col9a1-201ENSMUST00000054588 Abl1P00520 1123 aa12.87□□□□□ -0.35
Col9a1-201ENSMUST00000054588 OptnQ8K3K8 584 aa12.87□□□□□ -0.35
Col9a1-201ENSMUST00000054588 NalcnQ8BXR5 1738 aa12.87□□□□□ -0.35
Col9a1-201ENSMUST00000054588 N4bp2F8VQG7 1678 aaKnown RBP12.87□□□□□ -0.35
Col9a1-201ENSMUST00000054588 Gigyf1Q99MR1 1044 aaKnown RBP12.87□□□□□ -0.35
Col9a1-201ENSMUST00000054588 Fkbp5Q64378 456 aa12.87□□□□□ -0.35
Col9a1-201ENSMUST00000054588 Rcan3Q9JKK0 239 aa12.87□□□□□ -0.35
Col9a1-201ENSMUST00000054588 Znf692Q3U381 531 aa12.86□□□□□ -0.35
Col9a1-201ENSMUST00000054588 Utp18Q5SSI6 552 aaKnown RBP12.86□□□□□ -0.35
Col9a1-201ENSMUST00000054588 Ddx11Q6AXC6 880 aa12.86□□□□□ -0.35
Col9a1-201ENSMUST00000054588 Cnksr1A2A9K7 700 aa12.86□□□□□ -0.35
Col9a1-201ENSMUST00000054588 GckrQ91X44 587 aa12.86□□□□□ -0.35
Col9a1-201ENSMUST00000054588 Parp14Q2EMV9 1817 aa12.86□□□□□ -0.35
Retrieved 100 of 22,080 RNA–protein pairs in 10.4 ms