RNA–Protein interactions for RNA: ENSMUST00000052747.3

Nhlrc1-201, Transcript of E3 ubiquitin-protein ligase NHLRC1, mousemouse

APPRIS P1 BASIC

Gene Nhlrc1, Length 2,294 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nhlrc1-201ENSMUST00000052747 Pdzrn3Q69ZS0 1063 aa28.34■■■□□ 2.13
Nhlrc1-201ENSMUST00000052747 Stk3Q9JI10 497 aa28.34■■■□□ 2.13
Nhlrc1-201ENSMUST00000052747 Mphosph10Q810V0 681 aaKnown RBP28.34■■■□□ 2.13
Nhlrc1-201ENSMUST00000052747 Gimap6Q8K349 305 aa28.34■■■□□ 2.13
Nhlrc1-201ENSMUST00000052747 Dnajc10Q9DC23 793 aa28.34■■■□□ 2.13
Nhlrc1-201ENSMUST00000052747 Col1a2Q01149 1372 aa28.33■■■□□ 2.13
Nhlrc1-201ENSMUST00000052747 Map3k13Q1HKZ5 959 aa28.33■■■□□ 2.13
Nhlrc1-201ENSMUST00000052747 Mlh1Q9JK91 760 aa28.32■■■□□ 2.12
Nhlrc1-201ENSMUST00000052747 Adcy9P51830 1353 aa28.32■■■□□ 2.12
Nhlrc1-201ENSMUST00000052747 Nid2O88322 1403 aa28.32■■■□□ 2.12
Nhlrc1-201ENSMUST00000052747 Cpa2Q504N0 417 aa28.32■■■□□ 2.12
Nhlrc1-201ENSMUST00000052747 Sipa1l2Q80TE4 1722 aa28.32■■■□□ 2.12
Nhlrc1-201ENSMUST00000052747 Utp18Q5SSI6 552 aaKnown RBP28.31■■■□□ 2.12
Nhlrc1-201ENSMUST00000052747 Ccdc7Q9D541 371 aa28.31■■■□□ 2.12
Nhlrc1-201ENSMUST00000052747 Slx4ipQ9D7Y9 413 aa28.31■■■□□ 2.12
Nhlrc1-201ENSMUST00000052747 Bcl2l13P59017 434 aa28.3■■■□□ 2.12
Nhlrc1-201ENSMUST00000052747 Rrp9Q91WM3 475 aaKnown RBP28.3■■■□□ 2.12
Nhlrc1-201ENSMUST00000052747 TimelessQ9R1X4 1197 aa28.3■■■□□ 2.12
Nhlrc1-201ENSMUST00000052747 Kcnh5Q920E3 988 aa28.3■■■□□ 2.12
Nhlrc1-201ENSMUST00000052747 Rad50P70388 1312 aa28.29■■■□□ 2.12
Nhlrc1-201ENSMUST00000052747 Aox2Q5SGK3 1345 aa28.29■■■□□ 2.12
Nhlrc1-201ENSMUST00000052747 Syce3B5KM66 88 aa28.29■■■□□ 2.12
Nhlrc1-201ENSMUST00000052747 Ints3Q7TPD0 1041 aaKnown RBP28.28■■■□□ 2.12
Nhlrc1-201ENSMUST00000052747 Ppp1r37Q8BKR5 712 aa28.28■■■□□ 2.12
Nhlrc1-201ENSMUST00000052747 MyclP10166 368 aa28.27■■■□□ 2.12
Nhlrc1-201ENSMUST00000052747 Rrp12Q6P5B0 1295 aaKnown RBP28.27■■■□□ 2.12
Nhlrc1-201ENSMUST00000052747 Tceal9Q9DD24 104 aa28.27■■■□□ 2.12
Nhlrc1-201ENSMUST00000052747 Fmnl2A2APV2 1086 aa28.27■■■□□ 2.12
Nhlrc1-201ENSMUST00000052747 Strn4P58404 760 aa28.27■■■□□ 2.12
Nhlrc1-201ENSMUST00000052747 Ddx19aQ61655 478 aaKnown RBP28.27■■■□□ 2.12
Nhlrc1-201ENSMUST00000052747 Tgfb1i1Q62219 461 aa28.27■■■□□ 2.12
Nhlrc1-201ENSMUST00000052747 Brf1Q8CFK2 676 aa28.27■■■□□ 2.12
Nhlrc1-201ENSMUST00000052747 Bcl9Q9D219 1425 aa28.27■■■□□ 2.12
Nhlrc1-201ENSMUST00000052747 Erich6bQ9D4S6 220 aa28.26■■■□□ 2.11
Nhlrc1-201ENSMUST00000052747 Tns3Q5SSZ5 1440 aa28.26■■■□□ 2.11
Nhlrc1-201ENSMUST00000052747 Col14a1Q80X19 1797 aa28.26■■■□□ 2.11
Nhlrc1-201ENSMUST00000052747 Map3k2Q61083 619 aa28.26■■■□□ 2.11
Nhlrc1-201ENSMUST00000052747 Ddrgk1Q80WW9 315 aa28.25■■■□□ 2.11
Nhlrc1-201ENSMUST00000052747 Elmsan1E9Q2I4 1089 aaKnown RBP28.25■■■□□ 2.11
Nhlrc1-201ENSMUST00000052747 Kif4P33174 1231 aa28.24■■■□□ 2.11
Nhlrc1-201ENSMUST00000052747 BcorQ8CGN4 1759 aa28.24■■■□□ 2.11
Nhlrc1-201ENSMUST00000052747 Glipr1l2Q9CQ35 332 aa28.23■■■□□ 2.11
Nhlrc1-201ENSMUST00000052747 PsapQ61207 557 aaKnown RBP28.23■■■□□ 2.11
Nhlrc1-201ENSMUST00000052747 Gripap1Q8VD04 806 aa28.23■■■□□ 2.11
Nhlrc1-201ENSMUST00000052747 Atp10bB1AWN4 1474 aa28.23■■■□□ 2.11
Nhlrc1-201ENSMUST00000052747 Wdr17E9Q271 1322 aa28.23■■■□□ 2.11
Nhlrc1-201ENSMUST00000052747 Rimbp3Q3V0F0 1606 aa28.23■■■□□ 2.11
Nhlrc1-201ENSMUST00000052747 Gjb2Q00977 226 aa28.22■■■□□ 2.11
Nhlrc1-201ENSMUST00000052747 GckrQ91X44 587 aa28.22■■■□□ 2.11
Nhlrc1-201ENSMUST00000052747 Pa2g4P50580 394 aaKnown RBP28.22■■■□□ 2.11
Nhlrc1-201ENSMUST00000052747 EspnlQ3UYR4 1005 aa28.22■■■□□ 2.11
Nhlrc1-201ENSMUST00000052747 Dhx16G3X8X0 1044 aaKnown RBP28.21■■■□□ 2.11
Nhlrc1-201ENSMUST00000052747 Brpf1B2RRD7 1212 aa28.2■■■□□ 2.11
Nhlrc1-201ENSMUST00000052747 Flt4P35917 1363 aa28.2■■■□□ 2.1
Nhlrc1-201ENSMUST00000052747 Fam228bQ497Q6 232 aa28.19■■■□□ 2.1
Nhlrc1-201ENSMUST00000052747 Nol12Q8BG17 217 aa28.19■■■□□ 2.1
Nhlrc1-201ENSMUST00000052747 Tmem119Q8R138 280 aa28.19■■■□□ 2.1
Nhlrc1-201ENSMUST00000052747 Abcc4E9Q236 1325 aa28.19■■■□□ 2.1
Nhlrc1-201ENSMUST00000052747 Rbm27Q5SFM8 1060 aaKnown RBP28.18■■■□□ 2.1
Nhlrc1-201ENSMUST00000052747 Pof1bQ8K4L4 587 aa28.18■■■□□ 2.1
Nhlrc1-201ENSMUST00000052747 Top1mtQ8R4U6 593 aa28.18■■■□□ 2.1
Nhlrc1-201ENSMUST00000052747 Taf5lQ91WQ5 589 aa28.17■■■□□ 2.1
Nhlrc1-201ENSMUST00000052747 Rufy3Q9D394 469 aa28.17■■■□□ 2.1
Nhlrc1-201ENSMUST00000052747 Irf9Q61179 399 aa28.17■■■□□ 2.1
Nhlrc1-201ENSMUST00000052747 Ccdc155Q80VJ8 648 aa28.17■■■□□ 2.1
Nhlrc1-201ENSMUST00000052747 Eif3aP23116 1344 aaKnown RBP28.17■■■□□ 2.1
Nhlrc1-201ENSMUST00000052747 Ppfia1B2RXQ2 1266 aa28.16■■■□□ 2.1
Nhlrc1-201ENSMUST00000052747 Rnf214Q8BFU3 668 aaKnown RBP28.16■■■□□ 2.1
Nhlrc1-201ENSMUST00000052747 Zbtb3Q91X45 518 aa28.16■■■□□ 2.1
Nhlrc1-201ENSMUST00000052747 Add2Q9QYB8 725 aa28.16■■■□□ 2.1
Nhlrc1-201ENSMUST00000052747 Gm10471E9Q1C7 252 aa28.15■■■□□ 2.1
Nhlrc1-201ENSMUST00000052747 SympkQ80X82 1284 aa28.15■■■□□ 2.1
Nhlrc1-201ENSMUST00000052747 TnrQ8BYI9 1358 aa28.14■■■□□ 2.1
Nhlrc1-201ENSMUST00000052747 Zbtb45Q52KG4 520 aa28.13■■■□□ 2.09
Nhlrc1-201ENSMUST00000052747 Bicc1Q99MQ1 977 aaKnown RBP28.13■■■□□ 2.09
Nhlrc1-201ENSMUST00000052747 Gli3Q61602 1583 aa28.13■■■□□ 2.09
Nhlrc1-201ENSMUST00000052747 Kdm4aQ8BW72 1064 aa28.13■■■□□ 2.09
Nhlrc1-201ENSMUST00000052747 Fez1Q8K0X8 392 aa28.13■■■□□ 2.09
Nhlrc1-201ENSMUST00000052747 Ccar2Q8VDP4 922 aaKnown RBP28.13■■■□□ 2.09
Nhlrc1-201ENSMUST00000052747 HellsQ60848 821 aa28.12■■■□□ 2.09
Nhlrc1-201ENSMUST00000052747 Rcan3Q9JKK0 239 aa28.12■■■□□ 2.09
Nhlrc1-201ENSMUST00000052747 Thsd7aQ69ZU6 1645 aa28.12■■■□□ 2.09
Nhlrc1-201ENSMUST00000052747 Topaz1E5FYH1 1653 aa28.12■■■□□ 2.09
Nhlrc1-201ENSMUST00000052747 Tti2Q8BGV4 512 aa28.12■■■□□ 2.09
Nhlrc1-201ENSMUST00000052747 Taf7Q9R1C0 341 aa28.12■■■□□ 2.09
Nhlrc1-201ENSMUST00000052747 Zfp804bA0A0G2JGH6 1343 aa28.11■■■□□ 2.09
Nhlrc1-201ENSMUST00000052747 Ifit2Q64112 472 aa28.11■■■□□ 2.09
Nhlrc1-201ENSMUST00000052747 Edc3Q8K2D3 508 aaKnown RBP28.11■■■□□ 2.09
Nhlrc1-201ENSMUST00000052747 Siglec1Q62230 1695 aa28.11■■■□□ 2.09
Nhlrc1-201ENSMUST00000052747 VgfQ0VGU4 617 aa28.11■■■□□ 2.09
Nhlrc1-201ENSMUST00000052747 Bms1Q6PGF5 1284 aaKnown RBP28.11■■■□□ 2.09
Nhlrc1-201ENSMUST00000052747 Grm8P47743 908 aa28.1■■■□□ 2.09
Nhlrc1-201ENSMUST00000052747 Dzip1Q8BMD2 852 aa28.1■■■□□ 2.09
Nhlrc1-201ENSMUST00000052747 Syt1P46096 421 aa28.09■■■□□ 2.09
Nhlrc1-201ENSMUST00000052747 Smc3Q9CW03 1217 aaKnown RBP28.09■■■□□ 2.09
Nhlrc1-201ENSMUST00000052747 Zscan25B2RX31 543 aa28.09■■■□□ 2.09
Nhlrc1-201ENSMUST00000052747 Pdzd9Q9D9M4 266 aa28.09■■■□□ 2.09
Nhlrc1-201ENSMUST00000052747 Simc1E9Q6E9 1354 aa28.09■■■□□ 2.09
Nhlrc1-201ENSMUST00000052747 Col15a1O35206 1367 aa28.09■■■□□ 2.09
Nhlrc1-201ENSMUST00000052747 Znf692Q3U381 531 aa28.08■■■□□ 2.09
Retrieved 100 of 22,080 RNA–protein pairs in 57.8 ms