RNA–Protein interactions for RNA: ENSMUST00000048274.10

Ttc39b-202, Transcript of Tetratricopeptide repeat protein 39B, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ttc39b, Length 1,804 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc39b-202ENSMUST00000048274 Ccdc173A0JLY1 547 aa19.48■□□□□ 0.71
Ttc39b-202ENSMUST00000048274 Ier5O89113 308 aa19.48■□□□□ 0.71
Ttc39b-202ENSMUST00000048274 Chpf2Q3UU43 768 aa19.48■□□□□ 0.71
Ttc39b-202ENSMUST00000048274 Cyp2d11P24457 504 aa19.48■□□□□ 0.71
Ttc39b-202ENSMUST00000048274 Cabp4Q8VHC5 271 aa19.48■□□□□ 0.71
Ttc39b-202ENSMUST00000048274 Phactr2B1AVP0 632 aa19.47■□□□□ 0.71
Ttc39b-202ENSMUST00000048274 1700006A11RikB9EHI3 544 aa19.47■□□□□ 0.71
Ttc39b-202ENSMUST00000048274 Vsig10D3YX43 558 aa19.47■□□□□ 0.71
Ttc39b-202ENSMUST00000048274 Fam184aE9PW83 1143 aa19.47■□□□□ 0.71
Ttc39b-202ENSMUST00000048274 Pnma3Q8JZW8 466 aa19.47■□□□□ 0.71
Ttc39b-202ENSMUST00000048274 Ccar2Q8VDP4 922 aaKnown RBP19.47■□□□□ 0.71
Ttc39b-202ENSMUST00000048274 SrrtQ99MR6 875 aaKnown RBP19.47■□□□□ 0.71
Ttc39b-202ENSMUST00000048274 Amotl1Q9D4H4 968 aa19.47■□□□□ 0.71
Ttc39b-202ENSMUST00000048274 Scn4aQ9ER60 1841 aa19.46■□□□□ 0.71
Ttc39b-202ENSMUST00000048274 Elmsan1E9Q2I4 1089 aaKnown RBP19.46■□□□□ 0.71
Ttc39b-202ENSMUST00000048274 E4f1Q8CCE9 783 aa19.46■□□□□ 0.71
Ttc39b-202ENSMUST00000048274 Kdm6aO70546 1401 aa19.46■□□□□ 0.71
Ttc39b-202ENSMUST00000048274 Wdr93Q402B2 695 aa19.46■□□□□ 0.71
Ttc39b-202ENSMUST00000048274 Mknk2Q8CDB0 459 aa19.46■□□□□ 0.71
Ttc39b-202ENSMUST00000048274 Add2Q9QYB8 725 aa19.46■□□□□ 0.71
Ttc39b-202ENSMUST00000048274 Gm21190A0A0G2JGJ6 266 aa19.45■□□□□ 0.7
Ttc39b-202ENSMUST00000048274 Anp32cQ64G17 123 aa19.45■□□□□ 0.7
Ttc39b-202ENSMUST00000048274 Nckap5lQ6GQX2 1323 aa19.45■□□□□ 0.7
Ttc39b-202ENSMUST00000048274 Tbc1d31Q6NXY1 996 aa19.44■□□□□ 0.7
Ttc39b-202ENSMUST00000048274 Echdc1Q9D9V3 322 aa19.44■□□□□ 0.7
Ttc39b-202ENSMUST00000048274 Ripk4Q9ERK0 786 aa19.44■□□□□ 0.7
Ttc39b-202ENSMUST00000048274 Mindy4Q3UQI9 744 aa19.44■□□□□ 0.7
Ttc39b-202ENSMUST00000048274 Pde3bQ61409 1100 aa19.44■□□□□ 0.7
Ttc39b-202ENSMUST00000048274 Jakmip1Q8BVL9 626 aa19.44■□□□□ 0.7
Ttc39b-202ENSMUST00000048274 Slx4ipQ9D7Y9 413 aa19.44■□□□□ 0.7
Ttc39b-202ENSMUST00000048274 Erbb4Q61527 1308 aa19.44■□□□□ 0.7
Ttc39b-202ENSMUST00000048274 Nphp3Q7TNH6 1325 aa19.44■□□□□ 0.7
Ttc39b-202ENSMUST00000048274 Klhl34A2AI76 644 aa19.43■□□□□ 0.7
Ttc39b-202ENSMUST00000048274 Bend3Q6PAL0 825 aa19.43■□□□□ 0.7
Ttc39b-202ENSMUST00000048274 Tshz3Q8CGV9 1081 aa19.43■□□□□ 0.7
Ttc39b-202ENSMUST00000048274 Eif4a1P60843 406 aaKnown RBP19.42■□□□□ 0.7
Ttc39b-202ENSMUST00000048274 Nfat5Q9WV30 1534 aa19.42■□□□□ 0.7
Ttc39b-202ENSMUST00000048274 Atp10bB1AWN4 1474 aa19.41■□□□□ 0.7
Ttc39b-202ENSMUST00000048274 Larp1bA0A0A6YXJ7 370 aaKnown RBP19.41■□□□□ 0.7
Ttc39b-202ENSMUST00000048274 Znf692Q3U381 531 aa19.4■□□□□ 0.7
Ttc39b-202ENSMUST00000048274 Fyb1O35601 819 aa19.39■□□□□ 0.7
Ttc39b-202ENSMUST00000048274 Gzf1Q4VBD9 706 aa19.39■□□□□ 0.7
Ttc39b-202ENSMUST00000048274 SnrkQ8VDU5 748 aa19.39■□□□□ 0.7
Ttc39b-202ENSMUST00000048274 Gjb2Q00977 226 aa19.39■□□□□ 0.69
Ttc39b-202ENSMUST00000048274 Rbm27Q5SFM8 1060 aaKnown RBP19.39■□□□□ 0.69
Ttc39b-202ENSMUST00000048274 Ncoa4Q5U4H9 625 aa19.39■□□□□ 0.69
Ttc39b-202ENSMUST00000048274 Cchcr1Q8K2I2 770 aa19.39■□□□□ 0.69
Ttc39b-202ENSMUST00000048274 Med4Q9CQA5 270 aa19.39■□□□□ 0.69
Ttc39b-202ENSMUST00000048274 Rufy3Q9D394 469 aa19.39■□□□□ 0.69
Ttc39b-202ENSMUST00000048274 Mlh1Q9JK91 760 aa19.39■□□□□ 0.69
Ttc39b-202ENSMUST00000048274 Abcc4E9Q236 1325 aa19.38■□□□□ 0.69
Ttc39b-202ENSMUST00000048274 Ppfia1B2RXQ2 1266 aa19.38■□□□□ 0.69
Ttc39b-202ENSMUST00000048274 Gm10563F6WIE4 79 aa19.38■□□□□ 0.69
Ttc39b-202ENSMUST00000048274 Ube2hP62257 183 aa19.38■□□□□ 0.69
Ttc39b-202ENSMUST00000048274 Col1a2Q01149 1372 aa19.38■□□□□ 0.69
Ttc39b-202ENSMUST00000048274 Adcy9P51830 1353 aa19.37■□□□□ 0.69
Ttc39b-202ENSMUST00000048274 Mybbp1aQ7TPV4 1344 aaKnown RBP19.37■□□□□ 0.69
Ttc39b-202ENSMUST00000048274 Kcnb2A6H8H5 907 aa19.37■□□□□ 0.69
Ttc39b-202ENSMUST00000048274 Pank2Q3U4S0 443 aa19.37■□□□□ 0.69
Ttc39b-202ENSMUST00000048274 Stx6Q9JKK1 255 aa19.37■□□□□ 0.69
Ttc39b-202ENSMUST00000048274 Bcl9Q9D219 1425 aa19.37■□□□□ 0.69
Ttc39b-202ENSMUST00000048274 Gli3Q61602 1583 aa19.36■□□□□ 0.69
Ttc39b-202ENSMUST00000048274 Zfp804bA0A0G2JGH6 1343 aa19.36■□□□□ 0.69
Ttc39b-202ENSMUST00000048274 Col22a1E9Q7P1 1613 aa19.36■□□□□ 0.69
Ttc39b-202ENSMUST00000048274 Pdia4P08003 638 aaKnown RBP19.36■□□□□ 0.69
Ttc39b-202ENSMUST00000048274 Syt1P46096 421 aa19.36■□□□□ 0.69
Ttc39b-202ENSMUST00000048274 Cpa2Q504N0 417 aa19.36■□□□□ 0.69
Ttc39b-202ENSMUST00000048274 Tmem119Q8R138 280 aa19.36■□□□□ 0.69
Ttc39b-202ENSMUST00000048274 Top1mtQ8R4U6 593 aa19.36■□□□□ 0.69
Ttc39b-202ENSMUST00000048274 Chd1lQ9CXF7 900 aa19.36■□□□□ 0.69
Ttc39b-202ENSMUST00000048274 Rimbp3Q3V0F0 1606 aa19.36■□□□□ 0.69
Ttc39b-202ENSMUST00000048274 Eif3aP23116 1344 aaKnown RBP19.35■□□□□ 0.69
Ttc39b-202ENSMUST00000048274 NcapgE9PWG6 1004 aa19.35■□□□□ 0.69
Ttc39b-202ENSMUST00000048274 C3P01027 1663 aa19.35■□□□□ 0.69
Ttc39b-202ENSMUST00000048274 Rnf214Q8BFU3 668 aaKnown RBP19.35■□□□□ 0.69
Ttc39b-202ENSMUST00000048274 Tceal9Q9DD24 104 aa19.35■□□□□ 0.69
Ttc39b-202ENSMUST00000048274 Flt4P35917 1363 aa19.34■□□□□ 0.69
Ttc39b-202ENSMUST00000048274 Kiaa0232Q80U59 1396 aaKnown RBP19.34■□□□□ 0.69
Ttc39b-202ENSMUST00000048274 Tlr7P58681 1050 aa19.34■□□□□ 0.69
Ttc39b-202ENSMUST00000048274 Zfp51Q3U4L8 781 aa19.34■□□□□ 0.69
Ttc39b-202ENSMUST00000048274 HellsQ60848 821 aa19.34■□□□□ 0.69
Ttc39b-202ENSMUST00000048274 GapdhsQ64467 440 aa19.34■□□□□ 0.69
Ttc39b-202ENSMUST00000048274 Zscan22Q8BGS5 496 aa19.34■□□□□ 0.69
Ttc39b-202ENSMUST00000048274 Tti2Q8BGV4 512 aa19.34■□□□□ 0.69
Ttc39b-202ENSMUST00000048274 Olfml1Q8BSH2 233 aa19.34■□□□□ 0.69
Ttc39b-202ENSMUST00000048274 Smc3Q9CW03 1217 aaKnown RBP19.34■□□□□ 0.69
Ttc39b-202ENSMUST00000048274 Bach2P97303 839 aa19.33■□□□□ 0.69
Ttc39b-202ENSMUST00000048274 Fam228bQ497Q6 232 aa19.33■□□□□ 0.69
Ttc39b-202ENSMUST00000048274 Casc1Q6TDU8 730 aa19.33■□□□□ 0.69
Ttc39b-202ENSMUST00000048274 Ccdc178Q8CDV0 866 aa19.33■□□□□ 0.69
Ttc39b-202ENSMUST00000048274 Taf5lQ91WQ5 589 aa19.33■□□□□ 0.69
Ttc39b-202ENSMUST00000048274 EzrP26040 586 aaKnown RBP19.32■□□□□ 0.68
Ttc39b-202ENSMUST00000048274 Zap70P43404 618 aa19.32■□□□□ 0.68
Ttc39b-202ENSMUST00000048274 Sox12Q04890 314 aa19.32■□□□□ 0.68
Ttc39b-202ENSMUST00000048274 Tmem132eQ6IEE6 982 aa19.32■□□□□ 0.68
Ttc39b-202ENSMUST00000048274 Aox2Q5SGK3 1345 aa19.32■□□□□ 0.68
Ttc39b-202ENSMUST00000048274 Topaz1E5FYH1 1653 aa19.32■□□□□ 0.68
Ttc39b-202ENSMUST00000048274 Ccdc162pQ0VG85 912 aa19.32■□□□□ 0.68
Ttc39b-202ENSMUST00000048274 Hvcn1Q3U2S8 269 aa19.32■□□□□ 0.68
Ttc39b-202ENSMUST00000048274 Nom1Q3UFM5 854 aaKnown RBP19.32■□□□□ 0.68
Retrieved 100 of 22,080 RNA–protein pairs in 24 ms