RNA–Protein interactions for RNA: ENSMUST00000038188.13

Limch1-201, Transcript of LIM and calponin homology domains-containing protein 1, mousemouse

TSL 1 (best) BASIC

Gene Limch1, Length 5,903 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Limch1-201ENSMUST00000038188 Usp21Q9QZL6 566 aa12.67□□□□□ -0.38
Limch1-201ENSMUST00000038188 Dnmt1P13864 1620 aaKnown RBP12.67□□□□□ -0.38
Limch1-201ENSMUST00000038188 AatkQ80YE4 1365 aa12.67□□□□□ -0.38
Limch1-201ENSMUST00000038188 Atp6v1dP57746 247 aa12.66□□□□□ -0.38
Limch1-201ENSMUST00000038188 Spire2Q8K1S6 718 aa12.66□□□□□ -0.38
Limch1-201ENSMUST00000038188 Tpm4Q6IRU2 248 aa12.66□□□□□ -0.38
Limch1-201ENSMUST00000038188 RgmbQ7TQ33 436 aa12.66□□□□□ -0.38
Limch1-201ENSMUST00000038188 Slc39a6Q8C145 765 aa12.66□□□□□ -0.38
Limch1-201ENSMUST00000038188 Fam208aQ69ZR9 1610 aaKnown RBP12.65□□□□□ -0.38
Limch1-201ENSMUST00000038188 Atp1b3P97370 278 aa12.65□□□□□ -0.38
Limch1-201ENSMUST00000038188 Xrcc4Q924T3 326 aa12.65□□□□□ -0.38
Limch1-201ENSMUST00000038188 Ubxn2aQ99KJ0 258 aa12.65□□□□□ -0.38
Limch1-201ENSMUST00000038188 Pdzd9Q9D9M4 266 aa12.65□□□□□ -0.38
Limch1-201ENSMUST00000038188 Sos1Q62245 1319 aa12.65□□□□□ -0.38
Limch1-201ENSMUST00000038188 Rsph6aQ8CDR2 708 aa12.65□□□□□ -0.38
Limch1-201ENSMUST00000038188 Kdm5cP41230 1554 aa12.65□□□□□ -0.38
Limch1-201ENSMUST00000038188 Myl6bQ8CI43 207 aa12.65□□□□□ -0.38
Limch1-201ENSMUST00000038188 Pus7B7ZNL8 666 aaKnown RBP12.65□□□□□ -0.38
Limch1-201ENSMUST00000038188 Dctn1O08788 1281 aa12.65□□□□□ -0.38
Limch1-201ENSMUST00000038188 Slc4a8Q8JZR6 1089 aa12.65□□□□□ -0.38
Limch1-201ENSMUST00000038188 Vmn1r199Q8R280 367 aa12.65□□□□□ -0.38
Limch1-201ENSMUST00000038188 Fchsd1Q6PFY1 688 aa12.64□□□□□ -0.39
Limch1-201ENSMUST00000038188 Pcdhb5Q91XZ5 792 aa12.64□□□□□ -0.39
Limch1-201ENSMUST00000038188 Trap1aP19473 224 aa12.64□□□□□ -0.39
Limch1-201ENSMUST00000038188 Krt84Q99M73 603 aa12.64□□□□□ -0.39
Limch1-201ENSMUST00000038188 Fam213aQ9CYH2 218 aa12.64□□□□□ -0.39
Limch1-201ENSMUST00000038188 Lmbr1lQ9D1E5 489 aa12.64□□□□□ -0.39
Limch1-201ENSMUST00000038188 Uhrf1bp1lA2RSJ4 1457 aa12.64□□□□□ -0.39
Limch1-201ENSMUST00000038188 Ces5aQ6AW46 575 aa12.64□□□□□ -0.39
Limch1-201ENSMUST00000038188 Rhot2Q8JZN7 620 aa12.64□□□□□ -0.39
Limch1-201ENSMUST00000038188 SphkapQ6NSW3 1687 aa12.64□□□□□ -0.39
Limch1-201ENSMUST00000038188 Hdac6Q9Z2V5 1149 aa12.63□□□□□ -0.39
Limch1-201ENSMUST00000038188 Sp4Q62445 782 aa12.63□□□□□ -0.39
Limch1-201ENSMUST00000038188 Hdgfl1Q2VPR5 283 aa12.63□□□□□ -0.39
Limch1-201ENSMUST00000038188 Asic4Q7TNS7 539 aa12.63□□□□□ -0.39
Limch1-201ENSMUST00000038188 Adam1bQ8R534 806 aa12.63□□□□□ -0.39
Limch1-201ENSMUST00000038188 NapbP28663 298 aa12.63□□□□□ -0.39
Limch1-201ENSMUST00000038188 Filip1lQ6P6L0 1131 aa12.63□□□□□ -0.39
Limch1-201ENSMUST00000038188 AidaQ8C4Q6 305 aa12.63□□□□□ -0.39
Limch1-201ENSMUST00000038188 Cul5Q9D5V5 780 aa12.63□□□□□ -0.39
Limch1-201ENSMUST00000038188 Zkscan2G3X952 960 aa12.62□□□□□ -0.39
Limch1-201ENSMUST00000038188 Tpm2P58774 284 aa12.62□□□□□ -0.39
Limch1-201ENSMUST00000038188 Ubxn2bQ0KL01 331 aa12.62□□□□□ -0.39
Limch1-201ENSMUST00000038188 Eme2Q56A04 373 aa12.62□□□□□ -0.39
Limch1-201ENSMUST00000038188 Sema6bO54951 886 aa12.62□□□□□ -0.39
Limch1-201ENSMUST00000038188 Samm50Q8BGH2 469 aa12.62□□□□□ -0.39
Limch1-201ENSMUST00000038188 Map3k12Q60700 888 aa12.62□□□□□ -0.39
Limch1-201ENSMUST00000038188 Cops6O88545 324 aa12.62□□□□□ -0.39
Limch1-201ENSMUST00000038188 Adam1aQ60813 791 aa12.62□□□□□ -0.39
Limch1-201ENSMUST00000038188 PrimpolQ6P1E7 537 aa12.62□□□□□ -0.39
Limch1-201ENSMUST00000038188 Psma5Q9Z2U1 241 aaKnown RBP12.62□□□□□ -0.39
Limch1-201ENSMUST00000038188 Gprasp1Q5U4C1 1347 aa12.61□□□□□ -0.39
Limch1-201ENSMUST00000038188 Zap70P43404 618 aa12.61□□□□□ -0.39
Limch1-201ENSMUST00000038188 Tmem87bQ8BKU8 555 aa12.61□□□□□ -0.39
Limch1-201ENSMUST00000038188 Scaf11E9PZM7 1456 aaKnown RBP12.61□□□□□ -0.39
Limch1-201ENSMUST00000038188 Dcaf5Q80T85 946 aa12.61□□□□□ -0.39
Limch1-201ENSMUST00000038188 Ufl1Q8CCJ3 793 aaKnown RBP12.61□□□□□ -0.39
Limch1-201ENSMUST00000038188 Atxn3Q9CVD2 355 aa12.61□□□□□ -0.39
Limch1-201ENSMUST00000038188 Clcn1Q64347 994 aa12.61□□□□□ -0.39
Limch1-201ENSMUST00000038188 Rec8Q8C5S7 591 aa12.61□□□□□ -0.39
Limch1-201ENSMUST00000038188 KinQ8K339 391 aa12.61□□□□□ -0.39
Limch1-201ENSMUST00000038188 Echdc1Q9D9V3 322 aa12.61□□□□□ -0.39
Limch1-201ENSMUST00000038188 PtmsQ9D0J8 101 aaKnown RBP12.61□□□□□ -0.39
Limch1-201ENSMUST00000038188 Irs4Q9Z0Y7 1216 aa12.61□□□□□ -0.39
Limch1-201ENSMUST00000038188 Usp54Q8BL06 1588 aaKnown RBP12.61□□□□□ -0.39
Limch1-201ENSMUST00000038188 Ipo8Q7TMY7 1010 aa12.6□□□□□ -0.39
Limch1-201ENSMUST00000038188 3425401B19RikD3Z1D3 1412 aa12.6□□□□□ -0.39
Limch1-201ENSMUST00000038188 Kdm3bQ6ZPY7 1562 aa12.6□□□□□ -0.39
Limch1-201ENSMUST00000038188 Gm973E9Q295 1059 aa12.6□□□□□ -0.39
Limch1-201ENSMUST00000038188 Pagr1bF6V0H0 108 aa12.6□□□□□ -0.39
Limch1-201ENSMUST00000038188 Pagr1aQ99L02 253 aa12.6□□□□□ -0.39
Limch1-201ENSMUST00000038188 Htatsf1Q8BGC0 757 aa12.6□□□□□ -0.39
Limch1-201ENSMUST00000038188 Fsd2Q8BZ52 692 aa12.6□□□□□ -0.39
Limch1-201ENSMUST00000038188 Slc27a3O88561 667 aa12.6□□□□□ -0.39
Limch1-201ENSMUST00000038188 Trim44Q9QXA7 346 aa12.6□□□□□ -0.39
Limch1-201ENSMUST00000038188 Bag3Q9JLV1 577 aaKnown RBP12.59□□□□□ -0.39
Limch1-201ENSMUST00000038188 AdgbG3UZ78 1657 aa12.59□□□□□ -0.39
Limch1-201ENSMUST00000038188 Abcc3B2RX12 1523 aa12.59□□□□□ -0.39
Limch1-201ENSMUST00000038188 Snrpa1P57784 255 aaKnown RBP12.59□□□□□ -0.39
Limch1-201ENSMUST00000038188 Nap1l3Q794H2 544 aa12.59□□□□□ -0.39
Limch1-201ENSMUST00000038188 RalgapbQ8BQZ4 1484 aa12.59□□□□□ -0.39
Limch1-201ENSMUST00000038188 Plch2A2AP18 1501 aa12.58□□□□□ -0.39
Limch1-201ENSMUST00000038188 Pik3c2gO70167 1506 aa12.58□□□□□ -0.39
Limch1-201ENSMUST00000038188 Eddm13E9Q7F5 164 aa12.58□□□□□ -0.39
Limch1-201ENSMUST00000038188 En2P09066 324 aa12.58□□□□□ -0.4
Limch1-201ENSMUST00000038188 Hs6st3Q9QYK4 470 aa12.58□□□□□ -0.4
Limch1-201ENSMUST00000038188 Plekhh1Q80TI1 1356 aa12.58□□□□□ -0.4
Limch1-201ENSMUST00000038188 Cfap99A0A140LIX9 648 aa12.58□□□□□ -0.4
Limch1-201ENSMUST00000038188 Akt1s1Q9D1F4 257 aa12.58□□□□□ -0.4
Limch1-201ENSMUST00000038188 Nek4Q9Z1J2 792 aa12.58□□□□□ -0.4
Limch1-201ENSMUST00000038188 Gm15262A0A140LIQ5 728 aa12.57□□□□□ -0.4
Limch1-201ENSMUST00000038188 Zscan20B2KFW1 1030 aa12.57□□□□□ -0.4
Limch1-201ENSMUST00000038188 Atp2b3Q0VF55 1220 aa12.57□□□□□ -0.4
Limch1-201ENSMUST00000038188 Ivns1abpQ920Q8 642 aa12.57□□□□□ -0.4
Limch1-201ENSMUST00000038188 Dph6Q9CQ28 267 aa12.57□□□□□ -0.4
Limch1-201ENSMUST00000038188 Map4k4P97820 1233 aaKnown RBP12.57□□□□□ -0.4
Limch1-201ENSMUST00000038188 SympkQ80X82 1284 aa12.57□□□□□ -0.4
Limch1-201ENSMUST00000038188 Erc1Q99MI1 1120 aa12.57□□□□□ -0.4
Limch1-201ENSMUST00000038188 ImmtQ8CAQ8 757 aaKnown RBP12.57□□□□□ -0.4
Limch1-201ENSMUST00000038188 Ces1hD3Z298 562 aa12.56□□□□□ -0.4
Retrieved 100 of 22,080 RNA–protein pairs in 16.6 ms