RNA–Protein interactions for RNA: ENSMUST00000028767.8

Rtf1-201, Transcript of RNA polymerase-associated protein RTF1 homolog, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rtf1, Length 4,664 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rtf1-201ENSMUST00000028767 Gadd45bP22339 160 aa17.53■□□□□ 0.4
Rtf1-201ENSMUST00000028767 Grm8P47743 908 aa17.53■□□□□ 0.4
Rtf1-201ENSMUST00000028767 Ahdc1Q6PAL7 1594 aaKnown RBP17.53■□□□□ 0.4
Rtf1-201ENSMUST00000028767 Mcm3P25206 812 aaKnown RBP17.53■□□□□ 0.4
Rtf1-201ENSMUST00000028767 MarsQ68FL6 902 aaKnown RBP17.53■□□□□ 0.4
Rtf1-201ENSMUST00000028767 Abca9Q8K449 1623 aa17.52■□□□□ 0.4
Rtf1-201ENSMUST00000028767 Rbm27Q5SFM8 1060 aaKnown RBP17.52■□□□□ 0.4
Rtf1-201ENSMUST00000028767 ApobrQ8VBT6 942 aa17.52■□□□□ 0.4
Rtf1-201ENSMUST00000028767 BccipQ9CWI3 316 aa17.52■□□□□ 0.4
Rtf1-201ENSMUST00000028767 OptnQ8K3K8 584 aa17.52■□□□□ 0.4
Rtf1-201ENSMUST00000028767 4931400O07RikQ9D4M5 137 aa17.52■□□□□ 0.4
Rtf1-201ENSMUST00000028767 Cyp27a1Q9DBG1 533 aa17.52■□□□□ 0.39
Rtf1-201ENSMUST00000028767 Elp1Q7TT37 1333 aaKnown RBP17.52■□□□□ 0.39
Rtf1-201ENSMUST00000028767 Ppfia1B2RXQ2 1266 aa17.51■□□□□ 0.39
Rtf1-201ENSMUST00000028767 Tpd52l1O54818 204 aa17.51■□□□□ 0.39
Rtf1-201ENSMUST00000028767 Ddx17Q501J6 650 aaKnown RBP17.51■□□□□ 0.39
Rtf1-201ENSMUST00000028767 Kiaa0754Q69ZZ9 979 aa17.51■□□□□ 0.39
Rtf1-201ENSMUST00000028767 Myo5cE9Q1F5 1742 aa17.51■□□□□ 0.39
Rtf1-201ENSMUST00000028767 EappQ5BU09 281 aa17.51■□□□□ 0.39
Rtf1-201ENSMUST00000028767 Bicc1Q99MQ1 977 aaKnown RBP17.51■□□□□ 0.39
Rtf1-201ENSMUST00000028767 Cplx2P84086 134 aa17.51■□□□□ 0.39
Rtf1-201ENSMUST00000028767 Taf7Q9R1C0 341 aa17.51■□□□□ 0.39
Rtf1-201ENSMUST00000028767 Hoxa7P02830 229 aa17.5■□□□□ 0.39
Rtf1-201ENSMUST00000028767 Strn4P58404 760 aa17.5■□□□□ 0.39
Rtf1-201ENSMUST00000028767 Hook1Q8BIL5 728 aa17.5■□□□□ 0.39
Rtf1-201ENSMUST00000028767 Prkab2Q6PAM0 271 aa17.5■□□□□ 0.39
Rtf1-201ENSMUST00000028767 Fsd1Q7TPM6 496 aa17.5■□□□□ 0.39
Rtf1-201ENSMUST00000028767 Edc3Q8K2D3 508 aaKnown RBP17.5■□□□□ 0.39
Rtf1-201ENSMUST00000028767 Mlh1Q9JK91 760 aa17.5■□□□□ 0.39
Rtf1-201ENSMUST00000028767 Ddx19aQ61655 478 aaKnown RBP17.5■□□□□ 0.39
Rtf1-201ENSMUST00000028767 Znf335A2A5K6 1337 aa17.49■□□□□ 0.39
Rtf1-201ENSMUST00000028767 Ccdc173A0JLY1 547 aa17.49■□□□□ 0.39
Rtf1-201ENSMUST00000028767 Samd1D3YXK1 519 aa17.49■□□□□ 0.39
Rtf1-201ENSMUST00000028767 Ddx46Q569Z5 1032 aaKnown RBP17.49■□□□□ 0.39
Rtf1-201ENSMUST00000028767 Spty2d1Q68FG3 682 aa17.49■□□□□ 0.39
Rtf1-201ENSMUST00000028767 Igflr1Q3U4N7 345 aa17.49■□□□□ 0.39
Rtf1-201ENSMUST00000028767 Ccdc66Q6NS45 935 aa17.49■□□□□ 0.39
Rtf1-201ENSMUST00000028767 Cep57l1Q8VDS7 400 aa17.49■□□□□ 0.39
Rtf1-201ENSMUST00000028767 Zbtb3Q91X45 518 aa17.49■□□□□ 0.39
Rtf1-201ENSMUST00000028767 Stx6Q9JKK1 255 aa17.49■□□□□ 0.39
Rtf1-201ENSMUST00000028767 Ercc6l2Q9JIM3 1537 aa17.49■□□□□ 0.39
Rtf1-201ENSMUST00000028767 Me1P06801 572 aa17.49■□□□□ 0.39
Rtf1-201ENSMUST00000028767 ThemisQ8BGW0 636 aa17.49■□□□□ 0.39
Rtf1-201ENSMUST00000028767 Ccdc47Q9D024 483 aaKnown RBP17.49■□□□□ 0.39
Rtf1-201ENSMUST00000028767 Cfap99A0A140LIX9 648 aa17.48■□□□□ 0.39
Rtf1-201ENSMUST00000028767 Nup88Q8CEC0 753 aaKnown RBP17.48■□□□□ 0.39
Rtf1-201ENSMUST00000028767 Kdm4cQ8VCD7 1054 aa17.48■□□□□ 0.39
Rtf1-201ENSMUST00000028767 PdcQ9QW08 244 aa17.48■□□□□ 0.39
Rtf1-201ENSMUST00000028767 Gpatch3Q8BIY1 525 aa17.48■□□□□ 0.39
Rtf1-201ENSMUST00000028767 Disp3A3KFU9 1347 aa17.48■□□□□ 0.39
Rtf1-201ENSMUST00000028767 Kif20aP97329 887 aa17.48■□□□□ 0.39
Rtf1-201ENSMUST00000028767 SympkQ80X82 1284 aa17.48■□□□□ 0.39
Rtf1-201ENSMUST00000028767 Eif4a1P60843 406 aaKnown RBP17.47■□□□□ 0.39
Rtf1-201ENSMUST00000028767 Arhgef1Q61210 920 aaKnown RBP17.47■□□□□ 0.39
Rtf1-201ENSMUST00000028767 Pdzrn3Q69ZS0 1063 aa17.47■□□□□ 0.39
Rtf1-201ENSMUST00000028767 Golim4Q8BXA1 655 aa17.47■□□□□ 0.39
Rtf1-201ENSMUST00000028767 Slain2Q8CI08 581 aa17.47■□□□□ 0.39
Rtf1-201ENSMUST00000028767 Rbm8a2A0A0N4SUH6 174 aa17.47■□□□□ 0.39
Rtf1-201ENSMUST00000028767 Abl1P00520 1123 aa17.47■□□□□ 0.39
Rtf1-201ENSMUST00000028767 Fez1Q8K0X8 392 aa17.47■□□□□ 0.39
Rtf1-201ENSMUST00000028767 Rbm8aQ9CWZ3 174 aa17.47■□□□□ 0.39
Rtf1-201ENSMUST00000028767 Mctp1E9PV86 951 aa17.47■□□□□ 0.39
Rtf1-201ENSMUST00000028767 Myd88P22366 296 aa17.47■□□□□ 0.39
Rtf1-201ENSMUST00000028767 Ddx58Q6Q899 926 aa17.47■□□□□ 0.39
Rtf1-201ENSMUST00000028767 Foxp4Q9DBY0 795 aaKnown RBP17.47■□□□□ 0.39
Rtf1-201ENSMUST00000028767 Tlr7P58681 1050 aa17.47■□□□□ 0.39
Rtf1-201ENSMUST00000028767 Gsdma2Q32M21 443 aa17.47■□□□□ 0.39
Rtf1-201ENSMUST00000028767 Pms1Q8K119 917 aa17.47■□□□□ 0.39
Rtf1-201ENSMUST00000028767 TnmdQ9EP64 317 aa17.47■□□□□ 0.39
Rtf1-201ENSMUST00000028767 Noc3lQ8VI84 807 aaKnown RBP17.46■□□□□ 0.39
Rtf1-201ENSMUST00000028767 Tpm3-rs7D3Z2H9 248 aa17.46■□□□□ 0.39
Rtf1-201ENSMUST00000028767 Rbm10Q99KG3 930 aaKnown RBP17.46■□□□□ 0.39
Rtf1-201ENSMUST00000028767 Cdc42bpgQ80UW5 1551 aa17.46■□□□□ 0.39
Rtf1-201ENSMUST00000028767 Ppp6r1Q7TSI3 856 aa17.46■□□□□ 0.39
Rtf1-201ENSMUST00000028767 Srek1Q8BZX4 494 aaKnown RBP17.46■□□□□ 0.39
Rtf1-201ENSMUST00000028767 Dnajc5gQ8C632 165 aa17.46■□□□□ 0.39
Rtf1-201ENSMUST00000028767 Krt85Q9Z2T6 507 aa17.46■□□□□ 0.39
Rtf1-201ENSMUST00000028767 Stk36Q69ZM6 1316 aa17.45■□□□□ 0.38
Rtf1-201ENSMUST00000028767 EspnlQ3UYR4 1005 aa17.45■□□□□ 0.38
Rtf1-201ENSMUST00000028767 Erc1Q99MI1 1120 aa17.45■□□□□ 0.38
Rtf1-201ENSMUST00000028767 Efcab2Q9CQ46 164 aa17.45■□□□□ 0.38
Rtf1-201ENSMUST00000028767 Rcan3Q9JKK0 239 aa17.45■□□□□ 0.38
Rtf1-201ENSMUST00000028767 Agtpbp1Q641K1 1218 aa17.45■□□□□ 0.38
Rtf1-201ENSMUST00000028767 Rec8Q8C5S7 591 aa17.45■□□□□ 0.38
Rtf1-201ENSMUST00000028767 Pdcd11Q6NS46 1862 aaKnown RBP17.45■□□□□ 0.38
Rtf1-201ENSMUST00000028767 Gnat3Q3V3I2 354 aa17.45■□□□□ 0.38
Rtf1-201ENSMUST00000028767 Ankle2Q6P1H6 964 aa17.44■□□□□ 0.38
Rtf1-201ENSMUST00000028767 LratQ9JI60 231 aa17.44■□□□□ 0.38
Rtf1-201ENSMUST00000028767 Mroh1E0CZ22 1640 aa17.44■□□□□ 0.38
Rtf1-201ENSMUST00000028767 Washc4Q3UMB9 1173 aa17.44■□□□□ 0.38
Rtf1-201ENSMUST00000028767 Bms1Q6PGF5 1284 aaKnown RBP17.44■□□□□ 0.38
Rtf1-201ENSMUST00000028767 Pmfbp1Q9WVQ0 1022 aa17.44■□□□□ 0.38
Rtf1-201ENSMUST00000028767 Rbbp8nlA2ABX0 614 aa17.44■□□□□ 0.38
Rtf1-201ENSMUST00000028767 Mdm2P23804 489 aa17.44■□□□□ 0.38
Rtf1-201ENSMUST00000028767 Cct2P80314 535 aaKnown RBP17.44■□□□□ 0.38
Rtf1-201ENSMUST00000028767 Med4Q9CQA5 270 aa17.44■□□□□ 0.38
Rtf1-201ENSMUST00000028767 CrklP47941 303 aa17.43■□□□□ 0.38
Rtf1-201ENSMUST00000028767 Dnajc2P54103 621 aaKnown RBP17.43■□□□□ 0.38
Rtf1-201ENSMUST00000028767 Akap12Q9WTQ5 1684 aa17.43■□□□□ 0.38
Rtf1-201ENSMUST00000028767 Kiaa0556Q8C753 1610 aa17.43■□□□□ 0.38
Retrieved 100 of 22,080 RNA–protein pairs in 31.8 ms