RNA–Protein interactions for RNA: ENSMUST00000026740.5

Col7a1-201, Transcript of Collagen alpha-1(VII) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col7a1, Length 9,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1-201ENSMUST00000026740 Dnajc2P54103 621 aaKnown RBP16.57■□□□□ 0.24
Col7a1-201ENSMUST00000026740 Kdm2bQ6P1G2 1309 aa16.57■□□□□ 0.24
Col7a1-201ENSMUST00000026740 Strn4P58404 760 aa16.57■□□□□ 0.24
Col7a1-201ENSMUST00000026740 Ces1hD3Z298 562 aa16.57■□□□□ 0.24
Col7a1-201ENSMUST00000026740 Traf3ip1Q149C2 625 aa16.57■□□□□ 0.24
Col7a1-201ENSMUST00000026740 Rapgef3Q8VCC8 918 aa16.57■□□□□ 0.24
Col7a1-201ENSMUST00000026740 Epb41l3Q9WV92 929 aa16.57■□□□□ 0.24
Col7a1-201ENSMUST00000026740 Gas8Q60779 478 aa16.57■□□□□ 0.24
Col7a1-201ENSMUST00000026740 Ppp2r1aQ76MZ3 589 aa16.56■□□□□ 0.24
Col7a1-201ENSMUST00000026740 Znf526Q8BI66 675 aa16.56■□□□□ 0.24
Col7a1-201ENSMUST00000026740 Nfxl1E9Q8I7 918 aaKnown RBP16.56■□□□□ 0.24
Col7a1-201ENSMUST00000026740 Hmg20bQ9Z104 317 aa16.56■□□□□ 0.24
Col7a1-201ENSMUST00000026740 RalylQ8BTF8 293 aa16.56■□□□□ 0.24
Col7a1-201ENSMUST00000026740 Brd3Q8K2F0 726 aaKnown RBP16.56■□□□□ 0.24
Col7a1-201ENSMUST00000026740 Gtf3c5Q8R2T8 520 aa16.56■□□□□ 0.24
Col7a1-201ENSMUST00000026740 Camk4P08414 469 aa16.55■□□□□ 0.24
Col7a1-201ENSMUST00000026740 ZfxP17012 799 aa16.55■□□□□ 0.24
Col7a1-201ENSMUST00000026740 Igf2bp2Q5SF07 592 aaKnown RBP16.55■□□□□ 0.24
Col7a1-201ENSMUST00000026740 Speer4bQ9D9F7 267 aa16.55■□□□□ 0.24
Col7a1-201ENSMUST00000026740 Ift74Q8BKE9 600 aa16.55■□□□□ 0.24
Col7a1-201ENSMUST00000026740 Mtus1Q5HZI1 1210 aa16.55■□□□□ 0.24
Col7a1-201ENSMUST00000026740 Gramd4Q8CB44 633 aa16.55■□□□□ 0.24
Col7a1-201ENSMUST00000026740 Lman1Q9D0F3 517 aa16.55■□□□□ 0.24
Col7a1-201ENSMUST00000026740 Sil1Q9EPK6 465 aa16.55■□□□□ 0.24
Col7a1-201ENSMUST00000026740 Pip4k2bQ80XI4 416 aa16.55■□□□□ 0.24
Col7a1-201ENSMUST00000026740 FerP70451 823 aa16.55■□□□□ 0.24
Col7a1-201ENSMUST00000026740 Ttc21bQ0HA38 1315 aa16.54■□□□□ 0.24
Col7a1-201ENSMUST00000026740 Neurog2P70447 263 aa16.54■□□□□ 0.24
Col7a1-201ENSMUST00000026740 LyarQ08288 388 aaKnown RBP16.54■□□□□ 0.24
Col7a1-201ENSMUST00000026740 Hook2Q7TMK6 716 aa16.54■□□□□ 0.24
Col7a1-201ENSMUST00000026740 Babam1Q3UI43 333 aa16.54■□□□□ 0.24
Col7a1-201ENSMUST00000026740 Cog6Q8R3I3 657 aa16.54■□□□□ 0.24
Col7a1-201ENSMUST00000026740 Znf394Q9Z1D9 521 aa16.54■□□□□ 0.24
Col7a1-201ENSMUST00000026740 Cers3Q1A3B0 383 aa16.54■□□□□ 0.24
Col7a1-201ENSMUST00000026740 Cnga2Q62398 664 aa16.54■□□□□ 0.24
Col7a1-201ENSMUST00000026740 Dact3Q0PHV7 610 aa16.54■□□□□ 0.24
Col7a1-201ENSMUST00000026740 Pik3r4Q8VD65 1358 aa16.54■□□□□ 0.24
Col7a1-201ENSMUST00000026740 Fkbp4P30416 458 aa16.54■□□□□ 0.24
Col7a1-201ENSMUST00000026740 Ssh1Q76I79 1042 aa16.54■□□□□ 0.24
Col7a1-201ENSMUST00000026740 Atp2a2O55143 1044 aaKnown RBP16.54■□□□□ 0.24
Col7a1-201ENSMUST00000026740 Mnat1P51949 309 aa16.54■□□□□ 0.24
Col7a1-201ENSMUST00000026740 Gm21663A0A0G2JE01 267 aa16.54■□□□□ 0.24
Col7a1-201ENSMUST00000026740 5031410I06RikE9Q4E0 267 aa16.54■□□□□ 0.24
Col7a1-201ENSMUST00000026740 Gm5862K7N5V5 267 aa16.54■□□□□ 0.24
Col7a1-201ENSMUST00000026740 Gm10220K7N660 267 aa16.54■□□□□ 0.24
Col7a1-201ENSMUST00000026740 Krt79Q8VED5 531 aa16.54■□□□□ 0.24
Col7a1-201ENSMUST00000026740 Setdb1O88974 1307 aa16.53■□□□□ 0.24
Col7a1-201ENSMUST00000026740 Speer4f2E9Q366 295 aa16.53■□□□□ 0.24
Col7a1-201ENSMUST00000026740 Gse1Q3U3C9 1213 aa16.53■□□□□ 0.24
Col7a1-201ENSMUST00000026740 Tmem266Q8BZB3 538 aa16.53■□□□□ 0.24
Col7a1-201ENSMUST00000026740 Snw1Q9CSN1 536 aaKnown RBP16.53■□□□□ 0.24
Col7a1-201ENSMUST00000026740 Tmc2Q8R4P4 888 aa16.53■□□□□ 0.24
Col7a1-201ENSMUST00000026740 Anapc15-psA0A140T8L6 141 aa16.53■□□□□ 0.24
Col7a1-201ENSMUST00000026740 Smarcad1Q04692 1021 aa16.53■□□□□ 0.24
Col7a1-201ENSMUST00000026740 Map3k9Q3U1V8 1077 aa16.53■□□□□ 0.24
Col7a1-201ENSMUST00000026740 Gas2l3Q3UWW6 683 aa16.53■□□□□ 0.24
Col7a1-201ENSMUST00000026740 Ppip5k1A2ARP1 1436 aa16.53■□□□□ 0.24
Col7a1-201ENSMUST00000026740 Rassf2Q8BMS9 326 aa16.53■□□□□ 0.24
Col7a1-201ENSMUST00000026740 Elp1Q7TT37 1333 aaKnown RBP16.53■□□□□ 0.24
Col7a1-201ENSMUST00000026740 Ssx2ipQ8VC66 615 aa16.53■□□□□ 0.24
Col7a1-201ENSMUST00000026740 Opa1P58281 960 aa16.52■□□□□ 0.24
Col7a1-201ENSMUST00000026740 Specc1Q5SXY1 1067 aa16.52■□□□□ 0.24
Col7a1-201ENSMUST00000026740 Frmd3Q8BHD4 595 aa16.52■□□□□ 0.24
Col7a1-201ENSMUST00000026740 Ptpdc1Q6NZK8 747 aa16.52■□□□□ 0.24
Col7a1-201ENSMUST00000026740 Cdc37l1Q9CZP7 335 aa16.52■□□□□ 0.24
Col7a1-201ENSMUST00000026740 HnrnpmQ9D0E1 729 aaKnown RBP16.52■□□□□ 0.24
Col7a1-201ENSMUST00000026740 Paxip1Q6NZQ4 1056 aa16.52■□□□□ 0.24
Col7a1-201ENSMUST00000026740 GmnnO88513 206 aa16.52■□□□□ 0.24
Col7a1-201ENSMUST00000026740 Kcnh5Q920E3 988 aa16.52■□□□□ 0.24
Col7a1-201ENSMUST00000026740 Fam114a1Q9D281 569 aa16.52■□□□□ 0.23
Col7a1-201ENSMUST00000026740 4933428M09RikQ9D3X3 192 aa16.52■□□□□ 0.23
Col7a1-201ENSMUST00000026740 Zfp444Q3TDV8 331 aaKnown RBP16.52■□□□□ 0.23
Col7a1-201ENSMUST00000026740 Ces1aE9PYP1 563 aa16.52■□□□□ 0.23
Col7a1-201ENSMUST00000026740 Fam114a2Q8VE88 497 aa16.52■□□□□ 0.23
Col7a1-201ENSMUST00000026740 Rnf216P58283 853 aa16.51■□□□□ 0.23
Col7a1-201ENSMUST00000026740 Mtmr3Q8K296 1196 aa16.51■□□□□ 0.23
Col7a1-201ENSMUST00000026740 Riok3Q9DBU3 519 aaKnown RBP16.51■□□□□ 0.23
Col7a1-201ENSMUST00000026740 Ube2hP62257 183 aa16.51■□□□□ 0.23
Col7a1-201ENSMUST00000026740 Pde1cQ64338 706 aa16.51■□□□□ 0.23
Col7a1-201ENSMUST00000026740 Limch1Q3UH68 1057 aa16.51■□□□□ 0.23
Col7a1-201ENSMUST00000026740 Ppip5k2Q6ZQB6 1129 aa16.51■□□□□ 0.23
Col7a1-201ENSMUST00000026740 Specc1lQ2KN98 1118 aaKnown RBP16.51■□□□□ 0.23
Col7a1-201ENSMUST00000026740 Cep19Q9CQA8 163 aa16.51■□□□□ 0.23
Col7a1-201ENSMUST00000026740 Gm28919A0A087WP35 240 aa16.51■□□□□ 0.23
Col7a1-201ENSMUST00000026740 Pde4dQ01063 747 aa16.5■□□□□ 0.23
Col7a1-201ENSMUST00000026740 Mterf4Q8BVN4 346 aa16.5■□□□□ 0.23
Col7a1-201ENSMUST00000026740 Pkd2l2Q9JLG4 621 aa16.5■□□□□ 0.23
Col7a1-201ENSMUST00000026740 Nucb2P81117 420 aa16.5■□□□□ 0.23
Col7a1-201ENSMUST00000026740 Eif2aQ8BJW6 581 aaKnown RBP16.5■□□□□ 0.23
Col7a1-201ENSMUST00000026740 Tmod2Q9JKK7 351 aa16.5■□□□□ 0.23
Col7a1-201ENSMUST00000026740 MycnP03966 462 aaKnown RBP16.5■□□□□ 0.23
Col7a1-201ENSMUST00000026740 NrkQ9R0G8 1455 aa16.5■□□□□ 0.23
Col7a1-201ENSMUST00000026740 Brf1Q8CFK2 676 aa16.5■□□□□ 0.23
Col7a1-201ENSMUST00000026740 Frat2Q8K025 231 aa16.5■□□□□ 0.23
Col7a1-201ENSMUST00000026740 NgdnQ9DB96 315 aaKnown RBP16.5■□□□□ 0.23
Col7a1-201ENSMUST00000026740 Prr29B1ARI9 187 aa16.5■□□□□ 0.23
Col7a1-201ENSMUST00000026740 Dzip1lQ499E4 774 aa16.5■□□□□ 0.23
Col7a1-201ENSMUST00000026740 Krt15Q61414 452 aa16.49■□□□□ 0.23
Col7a1-201ENSMUST00000026740 Jph4Q80WT0 628 aa16.49■□□□□ 0.23
Col7a1-201ENSMUST00000026740 Tnip1Q9WUU8 647 aa16.49■□□□□ 0.23
Retrieved 100 of 22,080 RNA–protein pairs in 36.7 ms