RNA–Protein interactions for RNA: ENSMUST00000023154.2

Cldn1-201, Transcript of Claudin-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cldn1, Length 3,247 nt, Biotype protein coding, Subcellular localisation Tight Junction .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn1-201ENSMUST00000023154 Cadps2Q8BYR5 1297 aa11.27□□□□□ -0.61
Cldn1-201ENSMUST00000023154 Atg3Q9CPX6 314 aa11.27□□□□□ -0.61
Cldn1-201ENSMUST00000023154 Nsfl1cQ9CZ44 370 aaKnown RBP11.27□□□□□ -0.61
Cldn1-201ENSMUST00000023154 Nucb1Q02819 459 aaKnown RBP11.27□□□□□ -0.61
Cldn1-201ENSMUST00000023154 Irf9Q61179 399 aa11.27□□□□□ -0.61
Cldn1-201ENSMUST00000023154 Slc39a6Q8C145 765 aa11.27□□□□□ -0.61
Cldn1-201ENSMUST00000023154 ScaperF8VQ70 1398 aaKnown RBP11.27□□□□□ -0.61
Cldn1-201ENSMUST00000023154 Terf2O35144 541 aa11.26□□□□□ -0.61
Cldn1-201ENSMUST00000023154 Cnnm1Q0GA42 951 aa11.26□□□□□ -0.61
Cldn1-201ENSMUST00000023154 4930572O03RikQ8C5Y0 211 aa11.26□□□□□ -0.61
Cldn1-201ENSMUST00000023154 Cdhr2E9Q7P9 1308 aa11.26□□□□□ -0.61
Cldn1-201ENSMUST00000023154 Anapc15-psA0A140T8L6 141 aa11.26□□□□□ -0.61
Cldn1-201ENSMUST00000023154 Slc4a10Q5DTL9 1118 aa11.26□□□□□ -0.61
Cldn1-201ENSMUST00000023154 RestQ8VIG1 1082 aa11.26□□□□□ -0.61
Cldn1-201ENSMUST00000023154 Bicc1Q99MQ1 977 aaKnown RBP11.26□□□□□ -0.61
Cldn1-201ENSMUST00000023154 Q9D2X8 372 aa11.26□□□□□ -0.61
Cldn1-201ENSMUST00000023154 Gm21663A0A0G2JE01 267 aa11.26□□□□□ -0.61
Cldn1-201ENSMUST00000023154 Gm7361D3Z6R1 267 aa11.26□□□□□ -0.61
Cldn1-201ENSMUST00000023154 5031410I06RikE9Q4E0 267 aa11.26□□□□□ -0.61
Cldn1-201ENSMUST00000023154 Gm1979E9QAN3 267 aa11.26□□□□□ -0.61
Cldn1-201ENSMUST00000023154 Gm5862K7N5V5 267 aa11.26□□□□□ -0.61
Cldn1-201ENSMUST00000023154 Gm10220K7N660 267 aa11.26□□□□□ -0.61
Cldn1-201ENSMUST00000023154 Hmox1P14901 289 aa11.26□□□□□ -0.61
Cldn1-201ENSMUST00000023154 Zpr1Q62384 459 aa11.26□□□□□ -0.61
Cldn1-201ENSMUST00000023154 Ptpdc1Q6NZK8 747 aa11.26□□□□□ -0.61
Cldn1-201ENSMUST00000023154 Ssfa2Q922B9 1252 aa11.25□□□□□ -0.61
Cldn1-201ENSMUST00000023154 PrkcshO08795 521 aa11.25□□□□□ -0.61
Cldn1-201ENSMUST00000023154 Ppip5k2Q6ZQB6 1129 aa11.25□□□□□ -0.61
Cldn1-201ENSMUST00000023154 Ddx60E9PZQ1 1711 aa11.25□□□□□ -0.61
Cldn1-201ENSMUST00000023154 Tpx2A2APB8 745 aaKnown RBP11.24□□□□□ -0.61
Cldn1-201ENSMUST00000023154 Stk11ipQ3TAA7 1072 aa11.24□□□□□ -0.61
Cldn1-201ENSMUST00000023154 EngaseQ8BX80 734 aa11.24□□□□□ -0.61
Cldn1-201ENSMUST00000023154 Ints5Q8CHT3 1018 aa11.24□□□□□ -0.61
Cldn1-201ENSMUST00000023154 Pa2g4P50580 394 aaKnown RBP11.24□□□□□ -0.61
Cldn1-201ENSMUST00000023154 Slc5a1Q8C3K6 665 aa11.24□□□□□ -0.61
Cldn1-201ENSMUST00000023154 Efcab2Q9CQ46 164 aa11.24□□□□□ -0.61
Cldn1-201ENSMUST00000023154 Rfx1P48377 963 aa11.24□□□□□ -0.61
Cldn1-201ENSMUST00000023154 Ppm1mQ8BU27 406 aa11.24□□□□□ -0.61
Cldn1-201ENSMUST00000023154 TefQ9JLC6 301 aa11.24□□□□□ -0.61
Cldn1-201ENSMUST00000023154 Gm21680A0A0G2JGR8 267 aa11.23□□□□□ -0.61
Cldn1-201ENSMUST00000023154 Plekhd1B2RPU2 505 aa11.23□□□□□ -0.61
Cldn1-201ENSMUST00000023154 Eif3bQ8JZQ9 803 aaKnown RBP11.23□□□□□ -0.61
Cldn1-201ENSMUST00000023154 Lmbr1lQ9D1E5 489 aa11.23□□□□□ -0.61
Cldn1-201ENSMUST00000023154 Zkscan2G3X952 960 aa11.22□□□□□ -0.61
Cldn1-201ENSMUST00000023154 Slx1bQ8BX32 270 aa11.22□□□□□ -0.61
Cldn1-201ENSMUST00000023154 Dmrtc1Q9D9R7 182 aa11.22□□□□□ -0.61
Cldn1-201ENSMUST00000023154 HellsQ60848 821 aa11.22□□□□□ -0.61
Cldn1-201ENSMUST00000023154 Ccdc9Q8VC31 543 aaKnown RBP11.22□□□□□ -0.61
Cldn1-201ENSMUST00000023154 Tiam2Q6ZPF3 1715 aa11.22□□□□□ -0.61
Cldn1-201ENSMUST00000023154 Grm8P47743 908 aa11.21□□□□□ -0.61
Cldn1-201ENSMUST00000023154 Jarid2Q62315 1234 aa11.21□□□□□ -0.62
Cldn1-201ENSMUST00000023154 Htatsf1Q8BGC0 757 aa11.21□□□□□ -0.62
Cldn1-201ENSMUST00000023154 Akap11E9Q777 1895 aa11.21□□□□□ -0.62
Cldn1-201ENSMUST00000023154 Edc3Q8K2D3 508 aaKnown RBP11.2□□□□□ -0.62
Cldn1-201ENSMUST00000023154 Clcn1Q64347 994 aa11.2□□□□□ -0.62
Cldn1-201ENSMUST00000023154 Unc5clQ6R653 518 aa11.2□□□□□ -0.62
Cldn1-201ENSMUST00000023154 Antxr1Q9CZ52 562 aa11.2□□□□□ -0.62
Cldn1-201ENSMUST00000023154 MypnQ5DTJ9 1315 aa11.2□□□□□ -0.62
Cldn1-201ENSMUST00000023154 Shank3Q4ACU6 1730 aa11.2□□□□□ -0.62
Cldn1-201ENSMUST00000023154 Ets1P27577 440 aa11.2□□□□□ -0.62
Cldn1-201ENSMUST00000023154 Erc2Q6PH08 957 aa11.2□□□□□ -0.62
Cldn1-201ENSMUST00000023154 ZgpatQ8VDM1 511 aa11.2□□□□□ -0.62
Cldn1-201ENSMUST00000023154 Tceal9Q9DD24 104 aa11.2□□□□□ -0.62
Cldn1-201ENSMUST00000023154 Pard3Q99NH2 1333 aa11.2□□□□□ -0.62
Cldn1-201ENSMUST00000023154 Zbtb45Q52KG4 520 aa11.19□□□□□ -0.62
Cldn1-201ENSMUST00000023154 Kiaa0232Q80U59 1396 aaKnown RBP11.19□□□□□ -0.62
Cldn1-201ENSMUST00000023154 AceP09470 1312 aa11.19□□□□□ -0.62
Cldn1-201ENSMUST00000023154 NmiO35309 314 aa11.19□□□□□ -0.62
Cldn1-201ENSMUST00000023154 HdgfP51859 237 aaKnown RBP11.19□□□□□ -0.62
Cldn1-201ENSMUST00000023154 Zbtb3Q91X45 518 aa11.18□□□□□ -0.62
Cldn1-201ENSMUST00000023154 Marf1Q8BJ34 1730 aaKnown RBP11.18□□□□□ -0.62
Cldn1-201ENSMUST00000023154 Shank2Q80Z38 1476 aa11.18□□□□□ -0.62
Cldn1-201ENSMUST00000023154 Eif3aP23116 1344 aaKnown RBP11.18□□□□□ -0.62
Cldn1-201ENSMUST00000023154 Elp1Q7TT37 1333 aaKnown RBP11.18□□□□□ -0.62
Cldn1-201ENSMUST00000023154 Irx3P81067 507 aa11.18□□□□□ -0.62
Cldn1-201ENSMUST00000023154 Abcc4E9Q236 1325 aa11.18□□□□□ -0.62
Cldn1-201ENSMUST00000023154 Nlrp9bQ66X22 1003 aa11.18□□□□□ -0.62
Cldn1-201ENSMUST00000023154 Ank1Q02357 1862 aa11.17□□□□□ -0.62
Cldn1-201ENSMUST00000023154 Cct4P80315 539 aaKnown RBP11.17□□□□□ -0.62
Cldn1-201ENSMUST00000023154 Fam228bQ497Q6 232 aa11.17□□□□□ -0.62
Cldn1-201ENSMUST00000023154 Tshz3Q8CGV9 1081 aa11.17□□□□□ -0.62
Cldn1-201ENSMUST00000023154 Pdlim2Q8R1G6 349 aa11.17□□□□□ -0.62
Cldn1-201ENSMUST00000023154 Kdm4cQ8VCD7 1054 aa11.17□□□□□ -0.62
Cldn1-201ENSMUST00000023154 Stk3Q9JI10 497 aa11.17□□□□□ -0.62
Cldn1-201ENSMUST00000023154 Zkscan16A2ALW2 728 aa11.17□□□□□ -0.62
Cldn1-201ENSMUST00000023154 Nol8Q3UHX0 1147 aaKnown RBP11.17□□□□□ -0.62
Cldn1-201ENSMUST00000023154 EspnlQ3UYR4 1005 aa11.17□□□□□ -0.62
Cldn1-201ENSMUST00000023154 Ripor2Q80U16 1078 aa11.17□□□□□ -0.62
Cldn1-201ENSMUST00000023154 Ddx54Q8K4L0 874 aaKnown RBP11.17□□□□□ -0.62
Cldn1-201ENSMUST00000023154 PappaQ8R4K8 1624 aa11.17□□□□□ -0.62
Cldn1-201ENSMUST00000023154 Adora1Q60612 326 aa11.16□□□□□ -0.62
Cldn1-201ENSMUST00000023154 Hsp90b1P08113 802 aaKnown RBP11.16□□□□□ -0.62
Cldn1-201ENSMUST00000023154 Mum1Q6DID5 682 aa11.16□□□□□ -0.62
Cldn1-201ENSMUST00000023154 1700010I14RikQ7TPG0 532 aa11.16□□□□□ -0.62
Cldn1-201ENSMUST00000023154 Morc2aQ69ZX6 1030 aa11.16□□□□□ -0.62
Cldn1-201ENSMUST00000023154 Znf526Q8BI66 675 aa11.16□□□□□ -0.62
Cldn1-201ENSMUST00000023154 Flad1Q8R123 492 aa11.16□□□□□ -0.62
Cldn1-201ENSMUST00000023154 Syde2E9PUP1 1314 aa11.15□□□□□ -0.62
Cldn1-201ENSMUST00000023154 Ddit3P35639 168 aa11.15□□□□□ -0.62
Cldn1-201ENSMUST00000023154 Gimap5Q8BWF2 308 aa11.15□□□□□ -0.62
Retrieved 100 of 22,080 RNA–protein pairs in 25 ms