RNA–Protein interactions for RNA: ENSMUST00000021039.11

Lig3-201, Transcript of DNA ligase 3, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Lig3, Length 5,957 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3-201ENSMUST00000021039 Adamts13Q769J6 1426 aa9.56□□□□□ -0.88
Lig3-201ENSMUST00000021039 Gm7347D3YYI9 267 aa9.56□□□□□ -0.88
Lig3-201ENSMUST00000021039 Speer4aF8VPX6 267 aa9.56□□□□□ -0.88
Lig3-201ENSMUST00000021039 Fam213aQ9CYH2 218 aa9.56□□□□□ -0.88
Lig3-201ENSMUST00000021039 Zap70P43404 618 aa9.55□□□□□ -0.88
Lig3-201ENSMUST00000021039 Kcnh8P59111 1102 aa9.55□□□□□ -0.88
Lig3-201ENSMUST00000021039 Ankrd50F7BE84 1390 aa9.55□□□□□ -0.88
Lig3-201ENSMUST00000021039 Irx3P81067 507 aa9.55□□□□□ -0.88
Lig3-201ENSMUST00000021039 Spg7Q3ULF4 781 aa9.55□□□□□ -0.88
Lig3-201ENSMUST00000021039 Bcl11aQ9QYE3 773 aa9.55□□□□□ -0.88
Lig3-201ENSMUST00000021039 AU015836B2RUM3 263 aa9.55□□□□□ -0.88
Lig3-201ENSMUST00000021039 Slc7a3P70423 618 aa9.55□□□□□ -0.88
Lig3-201ENSMUST00000021039 Esco1Q69Z69 843 aa9.55□□□□□ -0.88
Lig3-201ENSMUST00000021039 Ccp110Q7TSH4 1004 aa9.55□□□□□ -0.88
Lig3-201ENSMUST00000021039 Prkab2Q6PAM0 271 aa9.55□□□□□ -0.88
Lig3-201ENSMUST00000021039 Lmbr1lQ9D1E5 489 aa9.55□□□□□ -0.88
Lig3-201ENSMUST00000021039 Miga2Q8BK03 593 aa9.54□□□□□ -0.88
Lig3-201ENSMUST00000021039 Slc26a8Q8R0C3 999 aa9.54□□□□□ -0.88
Lig3-201ENSMUST00000021039 Kank1E9Q238 1360 aa9.54□□□□□ -0.88
Lig3-201ENSMUST00000021039 Cchcr1Q8K2I2 770 aa9.54□□□□□ -0.88
Lig3-201ENSMUST00000021039 Ak7Q9D2H2 614 aa9.54□□□□□ -0.88
Lig3-201ENSMUST00000021039 Bcl9Q9D219 1425 aa9.54□□□□□ -0.88
Lig3-201ENSMUST00000021039 Ppfibp2O35711 882 aa9.54□□□□□ -0.88
Lig3-201ENSMUST00000021039 CgnP59242 1191 aa9.54□□□□□ -0.88
Lig3-201ENSMUST00000021039 MpndQ3TV65 487 aa9.54□□□□□ -0.88
Lig3-201ENSMUST00000021039 St18Q80TY4 1045 aa9.54□□□□□ -0.88
Lig3-201ENSMUST00000021039 Dydc2Q9D3X8 139 aa9.54□□□□□ -0.88
Lig3-201ENSMUST00000021039 Cyp2ab1S4R196 498 aa9.54□□□□□ -0.88
Lig3-201ENSMUST00000021039 Tspyl2Q7TQI8 677 aa9.54□□□□□ -0.88
Lig3-201ENSMUST00000021039 CemipQ8BI06 1361 aa9.54□□□□□ -0.88
Lig3-201ENSMUST00000021039 Grm8P47743 908 aa9.54□□□□□ -0.88
Lig3-201ENSMUST00000021039 Ptpdc1Q6NZK8 747 aa9.54□□□□□ -0.88
Lig3-201ENSMUST00000021039 Dip2bQ3UH60 1574 aa9.54□□□□□ -0.88
Lig3-201ENSMUST00000021039 Speer4dL7N216 212 aa9.53□□□□□ -0.88
Lig3-201ENSMUST00000021039 Abl1P00520 1123 aa9.53□□□□□ -0.88
Lig3-201ENSMUST00000021039 Odf2lQ9D478 642 aa9.53□□□□□ -0.88
Lig3-201ENSMUST00000021039 Bag3Q9JLV1 577 aaKnown RBP9.53□□□□□ -0.88
Lig3-201ENSMUST00000021039 KdrP35918 1367 aa9.53□□□□□ -0.88
Lig3-201ENSMUST00000021039 Vps33bP59016 617 aa9.53□□□□□ -0.88
Lig3-201ENSMUST00000021039 Ppp6r1Q7TSI3 856 aa9.53□□□□□ -0.88
Lig3-201ENSMUST00000021039 Slc14a2Q8R4T9 930 aa9.53□□□□□ -0.88
Lig3-201ENSMUST00000021039 Hdac6Q9Z2V5 1149 aa9.53□□□□□ -0.88
Lig3-201ENSMUST00000021039 AceP09470 1312 aa9.53□□□□□ -0.88
Lig3-201ENSMUST00000021039 Ttc21aQ8C0S4 1314 aa9.53□□□□□ -0.88
Lig3-201ENSMUST00000021039 Ttc14Q9CSP9 761 aa9.53□□□□□ -0.88
Lig3-201ENSMUST00000021039 Kif18aQ91WD7 886 aa9.52□□□□□ -0.89
Lig3-201ENSMUST00000021039 Erc1Q99MI1 1120 aa9.52□□□□□ -0.89
Lig3-201ENSMUST00000021039 Bicc1Q99MQ1 977 aaKnown RBP9.52□□□□□ -0.89
Lig3-201ENSMUST00000021039 RdxP26043 583 aaKnown RBP9.52□□□□□ -0.89
Lig3-201ENSMUST00000021039 Itsn2Q9Z0R6 1659 aa9.52□□□□□ -0.89
Lig3-201ENSMUST00000021039 Prdm11A2AGX3 565 aa9.52□□□□□ -0.89
Lig3-201ENSMUST00000021039 Phactr2B1AVP0 632 aa9.52□□□□□ -0.89
Lig3-201ENSMUST00000021039 Me1P06801 572 aa9.52□□□□□ -0.89
Lig3-201ENSMUST00000021039 Ipo9Q91YE6 1041 aa9.52□□□□□ -0.89
Lig3-201ENSMUST00000021039 ParvgQ9ERD8 331 aa9.52□□□□□ -0.89
Lig3-201ENSMUST00000021039 Usp19Q3UJD6 1360 aa9.51□□□□□ -0.89
Lig3-201ENSMUST00000021039 Ino80Q6ZPV2 1559 aa9.51□□□□□ -0.89
Lig3-201ENSMUST00000021039 Glg1Q61543 1175 aaKnown RBP9.51□□□□□ -0.89
Lig3-201ENSMUST00000021039 Izumo3A6PWV3 263 aa9.51□□□□□ -0.89
Lig3-201ENSMUST00000021039 Ccdc85cE9Q6B2 420 aa9.51□□□□□ -0.89
Lig3-201ENSMUST00000021039 Eif4a1P60843 406 aaKnown RBP9.51□□□□□ -0.89
Lig3-201ENSMUST00000021039 Srek1Q8BZX4 494 aaKnown RBP9.51□□□□□ -0.89
Lig3-201ENSMUST00000021039 Sde2Q8K1J5 448 aaKnown RBP9.51□□□□□ -0.89
Lig3-201ENSMUST00000021039 Ccdc183A2AJB1 534 aa9.51□□□□□ -0.89
Lig3-201ENSMUST00000021039 Sgsm1Q8BPQ7 1093 aa9.51□□□□□ -0.89
Lig3-201ENSMUST00000021039 Abcc12Q80WJ6 1366 aa9.51□□□□□ -0.89
Lig3-201ENSMUST00000021039 Rabep1O35551 862 aa9.51□□□□□ -0.89
Lig3-201ENSMUST00000021039 Msl1Q6PDM1 616 aa9.51□□□□□ -0.89
Lig3-201ENSMUST00000021039 Sh3tc1G3X9F6 1346 aa9.51□□□□□ -0.89
Lig3-201ENSMUST00000021039 Cep131Q62036 1060 aa9.5□□□□□ -0.89
Lig3-201ENSMUST00000021039 Qser1A2BIE1 1698 aa9.5□□□□□ -0.89
Lig3-201ENSMUST00000021039 Cep170bQ80U49 1574 aa9.5□□□□□ -0.89
Lig3-201ENSMUST00000021039 Snap23O09044 210 aa9.5□□□□□ -0.89
Lig3-201ENSMUST00000021039 Kiaa0754Q69ZZ9 979 aa9.5□□□□□ -0.89
Lig3-201ENSMUST00000021039 SnrkQ8VDU5 748 aa9.5□□□□□ -0.89
Lig3-201ENSMUST00000021039 Pim2Q62070 370 aa9.5□□□□□ -0.89
Lig3-201ENSMUST00000021039 Ints3Q7TPD0 1041 aaKnown RBP9.5□□□□□ -0.89
Lig3-201ENSMUST00000021039 Dcaf5Q80T85 946 aa9.5□□□□□ -0.89
Lig3-201ENSMUST00000021039 Znf18Q810A1 556 aa9.5□□□□□ -0.89
Lig3-201ENSMUST00000021039 Slc39a6Q8C145 765 aa9.5□□□□□ -0.89
Lig3-201ENSMUST00000021039 Ccer1Q9CQL2 403 aa9.5□□□□□ -0.89
Lig3-201ENSMUST00000021039 Ppp4r3aQ6P2K6 820 aa9.5□□□□□ -0.89
Lig3-201ENSMUST00000021039 Brf1Q8CFK2 676 aa9.5□□□□□ -0.89
Lig3-201ENSMUST00000021039 Cog6Q8R3I3 657 aa9.5□□□□□ -0.89
Lig3-201ENSMUST00000021039 Pde3aQ9Z0X4 1141 aa9.5□□□□□ -0.89
Lig3-201ENSMUST00000021039 Bsdc1Q80Y55 427 aa9.49□□□□□ -0.89
Lig3-201ENSMUST00000021039 Gm21969J3QJZ1 289 aa9.49□□□□□ -0.89
Lig3-201ENSMUST00000021039 Casq1O09165 405 aa9.49□□□□□ -0.89
Lig3-201ENSMUST00000021039 Tpd52l1O54818 204 aa9.49□□□□□ -0.89
Lig3-201ENSMUST00000021039 Smarca5Q91ZW3 1051 aaKnown RBP9.49□□□□□ -0.89
Lig3-201ENSMUST00000021039 Foxo3Q9WVH4 672 aa9.49□□□□□ -0.89
Lig3-201ENSMUST00000021039 Simc1E9Q6E9 1354 aa9.49□□□□□ -0.89
Lig3-201ENSMUST00000021039 Rsph3aQ3UFY4 516 aa9.49□□□□□ -0.89
Lig3-201ENSMUST00000021039 SfswapQ3USH5 945 aaKnown RBP9.49□□□□□ -0.89
Lig3-201ENSMUST00000021039 Atp8b2P98199 1209 aa9.49□□□□□ -0.89
Lig3-201ENSMUST00000021039 Igflr1Q3U4N7 345 aa9.49□□□□□ -0.89
Lig3-201ENSMUST00000021039 Rbm17Q8JZX4 405 aaKnown RBP9.49□□□□□ -0.89
Lig3-201ENSMUST00000021039 Aldh1l2Q8K009 923 aa9.49□□□□□ -0.89
Lig3-201ENSMUST00000021039 Polr3dQ91WD1 398 aa9.49□□□□□ -0.89
Lig3-201ENSMUST00000021039 Cnksr1A2A9K7 700 aa9.48□□□□□ -0.89
Retrieved 100 of 22,080 RNA–protein pairs in 17 ms