RNA–Protein interactions for RNA: ENSMUST00000014065.15

Clip3-201, Transcript of CAP-Gly domain-containing linker protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Clip3, Length 3,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clip3-201ENSMUST00000014065 Frmd3Q8BHD4 595 aa12.35□□□□□ -0.43
Clip3-201ENSMUST00000014065 Synj2Q9D2G5 1434 aa12.35□□□□□ -0.43
Clip3-201ENSMUST00000014065 Ptgs1P22437 602 aa12.35□□□□□ -0.43
Clip3-201ENSMUST00000014065 Pa2g4P50580 394 aaKnown RBP12.35□□□□□ -0.43
Clip3-201ENSMUST00000014065 Ube2hP62257 183 aa12.35□□□□□ -0.43
Clip3-201ENSMUST00000014065 Iffo2Q8R2V2 512 aa12.35□□□□□ -0.43
Clip3-201ENSMUST00000014065 Fam184aE9PW83 1143 aa12.34□□□□□ -0.43
Clip3-201ENSMUST00000014065 Q3UJC8 639 aa12.34□□□□□ -0.43
Clip3-201ENSMUST00000014065 Rufy3Q9D394 469 aa12.34□□□□□ -0.43
Clip3-201ENSMUST00000014065 Syt1P46096 421 aa12.34□□□□□ -0.43
Clip3-201ENSMUST00000014065 Med4Q9CQA5 270 aa12.34□□□□□ -0.43
Clip3-201ENSMUST00000014065 HypkQ9CR41 129 aa12.34□□□□□ -0.43
Clip3-201ENSMUST00000014065 Ier5O89113 308 aa12.34□□□□□ -0.43
Clip3-201ENSMUST00000014065 Dixdc1Q80Y83 711 aa12.34□□□□□ -0.43
Clip3-201ENSMUST00000014065 Hoxb7P09024 217 aa12.33□□□□□ -0.44
Clip3-201ENSMUST00000014065 Kif3aP28741 701 aa12.33□□□□□ -0.44
Clip3-201ENSMUST00000014065 Zfp51Q3U4L8 781 aa12.33□□□□□ -0.44
Clip3-201ENSMUST00000014065 Nup88Q8CEC0 753 aaKnown RBP12.33□□□□□ -0.44
Clip3-201ENSMUST00000014065 Rbm42Q91V81 474 aaKnown RBP12.33□□□□□ -0.44
Clip3-201ENSMUST00000014065 EzrP26040 586 aaKnown RBP12.33□□□□□ -0.44
Clip3-201ENSMUST00000014065 Edc3Q8K2D3 508 aaKnown RBP12.33□□□□□ -0.44
Clip3-201ENSMUST00000014065 Il1rapl2Q9ERS6 686 aa12.33□□□□□ -0.44
Clip3-201ENSMUST00000014065 Cdca7lQ922M5 438 aa12.32□□□□□ -0.44
Clip3-201ENSMUST00000014065 Ahdc1Q6PAL7 1594 aaKnown RBP12.32□□□□□ -0.44
Clip3-201ENSMUST00000014065 Gm973E9Q295 1059 aa12.32□□□□□ -0.44
Clip3-201ENSMUST00000014065 Znf541Q0GGX2 1363 aa12.32□□□□□ -0.44
Clip3-201ENSMUST00000014065 Rassf8Q8CJ96 419 aa12.32□□□□□ -0.44
Clip3-201ENSMUST00000014065 Bicd2Q921C5 820 aa12.32□□□□□ -0.44
Clip3-201ENSMUST00000014065 Sh3bgrQ9WUZ7 214 aa12.32□□□□□ -0.44
Clip3-201ENSMUST00000014065 Tti2Q8BGV4 512 aa12.32□□□□□ -0.44
Clip3-201ENSMUST00000014065 Disp3A3KFU9 1347 aa12.31□□□□□ -0.44
Clip3-201ENSMUST00000014065 Nol8Q3UHX0 1147 aaKnown RBP12.31□□□□□ -0.44
Clip3-201ENSMUST00000014065 Wdr93Q402B2 695 aa12.31□□□□□ -0.44
Clip3-201ENSMUST00000014065 Zpr1Q62384 459 aa12.31□□□□□ -0.44
Clip3-201ENSMUST00000014065 Zscan22Q8BGS5 496 aa12.31□□□□□ -0.44
Clip3-201ENSMUST00000014065 Sh3bp5Q9Z131 463 aa12.31□□□□□ -0.44
Clip3-201ENSMUST00000014065 Zfp804bA0A0G2JGH6 1343 aa12.31□□□□□ -0.44
Clip3-201ENSMUST00000014065 Cyp2d12Q8BVD2 504 aa12.31□□□□□ -0.44
Clip3-201ENSMUST00000014065 Grpel1Q99LP6 217 aa12.31□□□□□ -0.44
Clip3-201ENSMUST00000014065 Dhx30Q99PU8 1217 aaKnown RBP12.31□□□□□ -0.44
Clip3-201ENSMUST00000014065 Mx2Q9WVP9 655 aa12.31□□□□□ -0.44
Clip3-201ENSMUST00000014065 Abca14E9Q8F8 1683 aa12.31□□□□□ -0.44
Clip3-201ENSMUST00000014065 Rad50P70388 1312 aa12.31□□□□□ -0.44
Clip3-201ENSMUST00000014065 Mctp1E9PV86 951 aa12.31□□□□□ -0.44
Clip3-201ENSMUST00000014065 Cd22P35329 862 aa12.31□□□□□ -0.44
Clip3-201ENSMUST00000014065 Cchcr1Q8K2I2 770 aa12.31□□□□□ -0.44
Clip3-201ENSMUST00000014065 Ndufa8Q9DCJ5 172 aa12.31□□□□□ -0.44
Clip3-201ENSMUST00000014065 RdxP26043 583 aaKnown RBP12.3□□□□□ -0.44
Clip3-201ENSMUST00000014065 Usp25P57080 1055 aa12.3□□□□□ -0.44
Clip3-201ENSMUST00000014065 Ddx11Q6AXC6 880 aa12.3□□□□□ -0.44
Clip3-201ENSMUST00000014065 Rps6ka5Q8C050 863 aa12.3□□□□□ -0.44
Clip3-201ENSMUST00000014065 Wdr24Q8CFJ9 790 aa12.3□□□□□ -0.44
Clip3-201ENSMUST00000014065 DpydQ8CHR6 1025 aa12.3□□□□□ -0.44
Clip3-201ENSMUST00000014065 Neurod6P48986 337 aa12.3□□□□□ -0.44
Clip3-201ENSMUST00000014065 Nom1Q3UFM5 854 aaKnown RBP12.3□□□□□ -0.44
Clip3-201ENSMUST00000014065 Phf23Q8BSN5 401 aa12.3□□□□□ -0.44
Clip3-201ENSMUST00000014065 Amotl2Q8K371 772 aa12.3□□□□□ -0.44
Clip3-201ENSMUST00000014065 Polr3dQ91WD1 398 aa12.3□□□□□ -0.44
Clip3-201ENSMUST00000014065 Ifit2Q64112 472 aa12.29□□□□□ -0.44
Clip3-201ENSMUST00000014065 NaspQ99MD9 773 aaKnown RBP12.29□□□□□ -0.44
Clip3-201ENSMUST00000014065 TnmdQ9EP64 317 aa12.29□□□□□ -0.44
Clip3-201ENSMUST00000014065 Cspp1B2RX88 1205 aa12.29□□□□□ -0.44
Clip3-201ENSMUST00000014065 Ppfia1B2RXQ2 1266 aa12.29□□□□□ -0.44
Clip3-201ENSMUST00000014065 Zkscan7E9PVW1 718 aa12.29□□□□□ -0.44
Clip3-201ENSMUST00000014065 Ms4a2P20490 235 aa12.29□□□□□ -0.44
Clip3-201ENSMUST00000014065 Cct4P80315 539 aaKnown RBP12.29□□□□□ -0.44
Clip3-201ENSMUST00000014065 Ncbp1Q3UYV9 790 aaKnown RBP12.29□□□□□ -0.44
Clip3-201ENSMUST00000014065 Rsph4aQ8BYM7 716 aa12.29□□□□□ -0.44
Clip3-201ENSMUST00000014065 PdcQ9QW08 244 aa12.29□□□□□ -0.44
Clip3-201ENSMUST00000014065 Arhgef28P97433 1693 aa12.28□□□□□ -0.44
Clip3-201ENSMUST00000014065 IghaA0A0A6YXW6 389 aa12.28□□□□□ -0.44
Clip3-201ENSMUST00000014065 Lekr1B2RVN1 116 aa12.28□□□□□ -0.44
Clip3-201ENSMUST00000014065 Nlgn1Q99K10 843 aa12.28□□□□□ -0.44
Clip3-201ENSMUST00000014065 Foxp4Q9DBY0 795 aaKnown RBP12.28□□□□□ -0.44
Clip3-201ENSMUST00000014065 Qser1A2BIE1 1698 aa12.28□□□□□ -0.44
Clip3-201ENSMUST00000014065 Plekhg1F6S200 1446 aa12.28□□□□□ -0.44
Clip3-201ENSMUST00000014065 Brpf3B2KF05 1204 aaKnown RBP12.28□□□□□ -0.44
Clip3-201ENSMUST00000014065 Sass6Q80UK7 654 aa12.28□□□□□ -0.44
Clip3-201ENSMUST00000014065 Slc26a8Q8R0C3 999 aa12.28□□□□□ -0.44
Clip3-201ENSMUST00000014065 Ccdc7Q9D541 371 aa12.28□□□□□ -0.44
Clip3-201ENSMUST00000014065 Mdc1Q5PSV9 1707 aa12.28□□□□□ -0.44
Clip3-201ENSMUST00000014065 4930407I10RikD3Z5T8 1512 aa12.28□□□□□ -0.44
Clip3-201ENSMUST00000014065 Nxf2Q4ZGD8 691 aa12.27□□□□□ -0.44
Clip3-201ENSMUST00000014065 Tgfb1i1Q62219 461 aa12.27□□□□□ -0.44
Clip3-201ENSMUST00000014065 Ano6Q6P9J9 911 aa12.27□□□□□ -0.44
Clip3-201ENSMUST00000014065 Noc3lQ8VI84 807 aaKnown RBP12.27□□□□□ -0.44
Clip3-201ENSMUST00000014065 Tomm22Q9CPQ3 142 aa12.27□□□□□ -0.44
Clip3-201ENSMUST00000014065 Ccdc94Q9D6J3 314 aa12.27□□□□□ -0.44
Clip3-201ENSMUST00000014065 Stk36Q69ZM6 1316 aa12.27□□□□□ -0.44
Clip3-201ENSMUST00000014065 PzpQ61838 1495 aa12.27□□□□□ -0.45
Clip3-201ENSMUST00000014065 Rbm8a2A0A0N4SUH6 174 aa12.27□□□□□ -0.45
Clip3-201ENSMUST00000014065 Pkp1P97350 728 aaKnown RBP12.27□□□□□ -0.45
Clip3-201ENSMUST00000014065 Esyt1Q3U7R1 1092 aaKnown RBP12.27□□□□□ -0.45
Clip3-201ENSMUST00000014065 Rbm8aQ9CWZ3 174 aa12.27□□□□□ -0.45
Clip3-201ENSMUST00000014065 NktrP30415 1453 aa12.27□□□□□ -0.45
Clip3-201ENSMUST00000014065 Idi1P58044 227 aa12.27□□□□□ -0.45
Clip3-201ENSMUST00000014065 Mrpl50Q8VDT9 159 aaKnown RBP12.27□□□□□ -0.45
Clip3-201ENSMUST00000014065 Cyp2d11P24457 504 aa12.26□□□□□ -0.45
Clip3-201ENSMUST00000014065 Ets1P27577 440 aa12.26□□□□□ -0.45
Clip3-201ENSMUST00000014065 Map3k2Q61083 619 aa12.26□□□□□ -0.45
Retrieved 100 of 22,080 RNA–protein pairs in 11.7 ms