RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 C5orf58C9J3I9 102 aa13.15□□□□□ -0.3
PRPF40B-209ENST00000548825 WNT9AO14904 365 aa13.15□□□□□ -0.3
PRPF40B-209ENST00000548825 RGS5O15539 181 aa13.15□□□□□ -0.3
PRPF40B-209ENST00000548825 DNAJA1P31689 397 aaKnown RBP13.15□□□□□ -0.3
PRPF40B-209ENST00000548825 HPCAL1P37235 193 aa13.15□□□□□ -0.3
PRPF40B-209ENST00000548825 CTSKP43235 329 aa13.15□□□□□ -0.3
PRPF40B-209ENST00000548825 RNF144AP50876 292 aaPredicted RBP13.15□□□□□ -0.3
PRPF40B-209ENST00000548825 ZNF691Q5VV52 312 aa13.15□□□□□ -0.3
PRPF40B-209ENST00000548825 LAIR2Q6ISS4 152 aa13.15□□□□□ -0.3
PRPF40B-209ENST00000548825 MED27Q6P2C8 311 aa13.15□□□□□ -0.3
PRPF40B-209ENST00000548825 SETD9Q8NE22 299 aa13.15□□□□□ -0.3
PRPF40B-209ENST00000548825 ZNF480Q8WV37 535 aa13.15□□□□□ -0.3
PRPF40B-209ENST00000548825 IL1RAPQ9NPH3 570 aa13.15□□□□□ -0.3
PRPF40B-209ENST00000548825 IL36AQ9UHA7 158 aa13.15□□□□□ -0.3
PRPF40B-209ENST00000548825 SGTAO43765 313 aa13.15□□□□□ -0.3
PRPF40B-209ENST00000548825 PCDHGA12O60330 932 aa13.15□□□□□ -0.3
PRPF40B-209ENST00000548825 FUCA1P04066 466 aa13.15□□□□□ -0.3
PRPF40B-209ENST00000548825 RETP07949 1114 aa13.15□□□□□ -0.3
PRPF40B-209ENST00000548825 GSTM2P28161 218 aa13.15□□□□□ -0.3
PRPF40B-209ENST00000548825 VIPR1P32241 457 aa13.15□□□□□ -0.3
PRPF40B-209ENST00000548825 IRS1P35568 1242 aa13.15□□□□□ -0.3
PRPF40B-209ENST00000548825 HNMTP50135 292 aa13.15□□□□□ -0.3
PRPF40B-209ENST00000548825 SRSF11Q05519 484 aaKnown RBP13.15□□□□□ -0.3
PRPF40B-209ENST00000548825 KRT33BQ14525 404 aa13.15□□□□□ -0.3
PRPF40B-209ENST00000548825 ADPRMQ3LIE5 342 aa13.15□□□□□ -0.3
PRPF40B-209ENST00000548825 COLEC12Q5KU26 742 aa13.15□□□□□ -0.3
PRPF40B-209ENST00000548825 COMMD6Q7Z4G1 85 aa13.15□□□□□ -0.3
PRPF40B-209ENST00000548825 C11orf65Q8NCR3 313 aa13.15□□□□□ -0.3
PRPF40B-209ENST00000548825 XKR8Q9H6D3 395 aa13.15□□□□□ -0.3
PRPF40B-209ENST00000548825 ZNF556Q9HAH1 456 aa13.15□□□□□ -0.3
PRPF40B-209ENST00000548825 SACM1LQ9NTJ5 587 aa13.15□□□□□ -0.3
PRPF40B-209ENST00000548825 CXXC1Q9P0U4 656 aaPredicted RBP13.15□□□□□ -0.3
PRPF40B-209ENST00000548825 DNMT3BQ9UBC3 853 aaKnown RBP13.15□□□□□ -0.3
PRPF40B-209ENST00000548825 BRWD1Q9NSI6 2320 aa13.15□□□□□ -0.3
PRPF40B-209ENST00000548825 ATP6V1G1O75348 118 aa13.15□□□□□ -0.31
PRPF40B-209ENST00000548825 ERAL1O75616 437 aaKnown RBP13.15□□□□□ -0.31
PRPF40B-209ENST00000548825 POP7O75817 140 aaKnown RBP13.15□□□□□ -0.31
PRPF40B-209ENST00000548825 PCCBP05166 539 aa13.15□□□□□ -0.31
PRPF40B-209ENST00000548825 STSP08842 583 aa13.15□□□□□ -0.31
PRPF40B-209ENST00000548825 SLC6A11P48066 632 aa13.15□□□□□ -0.31
PRPF40B-209ENST00000548825 DGKGP49619 791 aa13.15□□□□□ -0.31
PRPF40B-209ENST00000548825 EIF2B2P49770 351 aaKnown RBP13.15□□□□□ -0.31
PRPF40B-209ENST00000548825 NPRL3Q12980 569 aa13.15□□□□□ -0.31
PRPF40B-209ENST00000548825 CLCA4Q14CN2 919 aa13.15□□□□□ -0.31
PRPF40B-209ENST00000548825 ARHGAP15Q53QZ3 475 aa13.15□□□□□ -0.31
PRPF40B-209ENST00000548825 CCDC149Q6ZUS6 474 aa13.15□□□□□ -0.31
PRPF40B-209ENST00000548825 ADIPOR2Q86V24 386 aa13.15□□□□□ -0.31
PRPF40B-209ENST00000548825 PTOV1Q86YD1 416 aa13.15□□□□□ -0.31
PRPF40B-209ENST00000548825 ZNF420Q8TAQ5 688 aaPredicted RBP13.15□□□□□ -0.31
PRPF40B-209ENST00000548825 COX4I2Q96KJ9 171 aa13.15□□□□□ -0.31
PRPF40B-209ENST00000548825 HERC2P3Q9BVR0 1158 aa13.15□□□□□ -0.31
PRPF40B-209ENST00000548825 RDH14Q9HBH5 336 aa13.15□□□□□ -0.31
PRPF40B-209ENST00000548825 USE1Q9NZ43 259 aa13.15□□□□□ -0.31
PRPF40B-209ENST00000548825 TAC3Q9UHF0 121 aa13.15□□□□□ -0.31
PRPF40B-209ENST00000548825 RFXAPO00287 272 aa13.14□□□□□ -0.31
PRPF40B-209ENST00000548825 NUAK1O60285 661 aa13.14□□□□□ -0.31
PRPF40B-209ENST00000548825 SYN1P17600 705 aa13.14□□□□□ -0.31
PRPF40B-209ENST00000548825 CAPN13Q6MZZ7 669 aaPredicted RBP13.14□□□□□ -0.31
PRPF40B-209ENST00000548825 PARS2Q7L3T8 475 aaKnown RBP13.14□□□□□ -0.31
PRPF40B-209ENST00000548825 LGI4Q8N135 537 aa13.14□□□□□ -0.31
PRPF40B-209ENST00000548825 OR10G2Q8NGC3 310 aa13.14□□□□□ -0.31
PRPF40B-209ENST00000548825 OR5AR1Q8NGP9 310 aa13.14□□□□□ -0.31
PRPF40B-209ENST00000548825 PHF10Q8WUB8 498 aaKnown RBP13.14□□□□□ -0.31
PRPF40B-209ENST00000548825 DNASE1L2Q92874 299 aa13.14□□□□□ -0.31
PRPF40B-209ENST00000548825 CHD9Q3L8U1 2897 aa13.14□□□□□ -0.31
PRPF40B-209ENST00000548825 ANKRD33BA6NCL7 494 aa13.14□□□□□ -0.31
PRPF40B-209ENST00000548825 A8MU76 341 aa13.14□□□□□ -0.31
PRPF40B-209ENST00000548825 TBX1O43435 398 aa13.14□□□□□ -0.31
PRPF40B-209ENST00000548825 SEC14L2O76054 403 aa13.14□□□□□ -0.31
PRPF40B-209ENST00000548825 IL3P08700 152 aa13.14□□□□□ -0.31
PRPF40B-209ENST00000548825 FPR1P21462 350 aa13.14□□□□□ -0.31
PRPF40B-209ENST00000548825 GPC1P35052 558 aa13.14□□□□□ -0.31
PRPF40B-209ENST00000548825 NKX3-2P78367 333 aa13.14□□□□□ -0.31
PRPF40B-209ENST00000548825 RGNQ15493 299 aa13.14□□□□□ -0.31
PRPF40B-209ENST00000548825 EXOC3L2Q2M3D2 409 aa13.14□□□□□ -0.31
PRPF40B-209ENST00000548825 TTC23LQ6PF05 361 aa13.14□□□□□ -0.31
PRPF40B-209ENST00000548825 BCDIN3DQ7Z5W3 292 aaKnown RBP13.14□□□□□ -0.31
PRPF40B-209ENST00000548825 C12orf40Q86WS4 652 aa13.14□□□□□ -0.31
PRPF40B-209ENST00000548825 BTN2A2Q8WVV5 523 aa13.14□□□□□ -0.31
PRPF40B-209ENST00000548825 FAR1Q8WVX9 515 aa13.14□□□□□ -0.31
PRPF40B-209ENST00000548825 TAMM41Q96BW9 452 aa13.14□□□□□ -0.31
PRPF40B-209ENST00000548825 NIPSNAP1Q9BPW8 284 aa13.14□□□□□ -0.31
PRPF40B-209ENST00000548825 CAPN10Q9HC96 672 aa13.14□□□□□ -0.31
PRPF40B-209ENST00000548825 HS3ST2Q9Y278 367 aa13.14□□□□□ -0.31
PRPF40B-209ENST00000548825 KLHL20Q9Y2M5 609 aa13.14□□□□□ -0.31
PRPF40B-209ENST00000548825 CACNA1IQ9P0X4 2223 aa13.14□□□□□ -0.31
PRPF40B-209ENST00000548825 H7BY64 318 aa13.13□□□□□ -0.31
PRPF40B-209ENST00000548825 PPM1DO15297 605 aa13.13□□□□□ -0.31
PRPF40B-209ENST00000548825 UGT2B11O75310 529 aa13.13□□□□□ -0.31
PRPF40B-209ENST00000548825 CBSLP0DN79 551 aa13.13□□□□□ -0.31
PRPF40B-209ENST00000548825 CBSP35520 551 aa13.13□□□□□ -0.31
PRPF40B-209ENST00000548825 RXRGP48443 463 aa13.13□□□□□ -0.31
PRPF40B-209ENST00000548825 AP1S2P56377 157 aa13.13□□□□□ -0.31
PRPF40B-209ENST00000548825 SCARB2Q14108 478 aa13.13□□□□□ -0.31
PRPF40B-209ENST00000548825 HIST2H2ACQ16777 129 aaPredicted RBP13.13□□□□□ -0.31
PRPF40B-209ENST00000548825 SLC5A12Q1EHB4 618 aa13.13□□□□□ -0.31
PRPF40B-209ENST00000548825 HIST2H2AA3Q6FI13 130 aa13.13□□□□□ -0.31
PRPF40B-209ENST00000548825 CROCCP3Q8IVE0 287 aa13.13□□□□□ -0.31
PRPF40B-209ENST00000548825 CELF5Q8N6W0 485 aaKnown RBP13.13□□□□□ -0.31
PRPF40B-209ENST00000548825 POF1BQ8WVV4 589 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms