RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 TNNQ9UQP3 1299 aa4.81□□□□□ -1.64
HMGB1P3-201ENST00000502802 NSG2Q9Y328 171 aa4.81□□□□□ -1.64
HMGB1P3-201ENST00000502802 WDR7Q9Y4E6 1490 aa4.81□□□□□ -1.64
HMGB1P3-201ENST00000502802 SAMD9Q5K651 1589 aa4.8□□□□□ -1.64
HMGB1P3-201ENST00000502802 TRBV5-5A0A0J9YX44 114 aa4.8□□□□□ -1.64
HMGB1P3-201ENST00000502802 H3BMM5 538 aa4.8□□□□□ -1.64
HMGB1P3-201ENST00000502802 GRAP2O75791 330 aa4.8□□□□□ -1.64
HMGB1P3-201ENST00000502802 DFFBO76075 338 aa4.8□□□□□ -1.64
HMGB1P3-201ENST00000502802 BMP15O95972 392 aa4.8□□□□□ -1.64
HMGB1P3-201ENST00000502802 GAS8O95995 478 aa4.8□□□□□ -1.64
HMGB1P3-201ENST00000502802 RAF1P04049 648 aa4.8□□□□□ -1.64
HMGB1P3-201ENST00000502802 YES1P07947 543 aa4.8□□□□□ -1.64
HMGB1P3-201ENST00000502802 MMP10P09238 476 aa4.8□□□□□ -1.64
HMGB1P3-201ENST00000502802 IGHV4-38-2P0DP08 117 aa4.8□□□□□ -1.64
HMGB1P3-201ENST00000502802 SFNP31947 248 aa4.8□□□□□ -1.64
HMGB1P3-201ENST00000502802 GPC3P51654 580 aa4.8□□□□□ -1.64
HMGB1P3-201ENST00000502802 HUNKP57058 714 aa4.8□□□□□ -1.64
HMGB1P3-201ENST00000502802 POLR2FP61218 127 aaKnown RBP4.8□□□□□ -1.64
HMGB1P3-201ENST00000502802 HTD2P86397 168 aa4.8□□□□□ -1.64
HMGB1P3-201ENST00000502802 SQLEQ14534 574 aa4.8□□□□□ -1.64
HMGB1P3-201ENST00000502802 ZC2HC1CQ53FD0 456 aaPredicted RBP4.8□□□□□ -1.64
HMGB1P3-201ENST00000502802 NADSYN1Q6IA69 706 aa4.8□□□□□ -1.64
HMGB1P3-201ENST00000502802 NFE4Q86UQ8 179 aa4.8□□□□□ -1.64
HMGB1P3-201ENST00000502802 ELMOD2Q8IZ81 293 aa4.8□□□□□ -1.64
HMGB1P3-201ENST00000502802 KDM8Q8N371 416 aa4.8□□□□□ -1.64
HMGB1P3-201ENST00000502802 GBP7Q8N8V2 638 aaPredicted RBP4.8□□□□□ -1.64
HMGB1P3-201ENST00000502802 ZNF383Q8NA42 475 aa4.8□□□□□ -1.64
HMGB1P3-201ENST00000502802 OR13A1Q8NGR1 328 aa4.8□□□□□ -1.64
HMGB1P3-201ENST00000502802 WBP2Q969T9 261 aa4.8□□□□□ -1.64
HMGB1P3-201ENST00000502802 SLCO4A1Q96BD0 722 aa4.8□□□□□ -1.64
HMGB1P3-201ENST00000502802 C4orf45Q96LM5 186 aa4.8□□□□□ -1.64
HMGB1P3-201ENST00000502802 DDX47Q9H0S4 455 aaKnown RBP4.8□□□□□ -1.64
HMGB1P3-201ENST00000502802 CARD9Q9H257 536 aa4.8□□□□□ -1.64
HMGB1P3-201ENST00000502802 C5orf66Q9H5L9 145 aa4.8□□□□□ -1.64
HMGB1P3-201ENST00000502802 ZDHHC6Q9H6R6 413 aa4.8□□□□□ -1.64
HMGB1P3-201ENST00000502802 KCNMB3Q9NPA1 279 aa4.8□□□□□ -1.64
HMGB1P3-201ENST00000502802 CD93Q9NPY3 652 aa4.8□□□□□ -1.64
HMGB1P3-201ENST00000502802 TMOD3Q9NYL9 352 aa4.8□□□□□ -1.64
HMGB1P3-201ENST00000502802 TAS2R3Q9NYW6 316 aa4.8□□□□□ -1.64
HMGB1P3-201ENST00000502802 KCNN3Q9UGI6 736 aa4.8□□□□□ -1.64
HMGB1P3-201ENST00000502802 IL36AQ9UHA7 158 aa4.8□□□□□ -1.64
HMGB1P3-201ENST00000502802 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.79□□□□□ -1.64
HMGB1P3-201ENST00000502802 CFAP73A6NFT4 308 aa4.79□□□□□ -1.64
HMGB1P3-201ENST00000502802 LACTBL1A8MY62 500 aa4.79□□□□□ -1.64
HMGB1P3-201ENST00000502802 FRMD6-AS1P0C7T7 363 aa4.79□□□□□ -1.64
HMGB1P3-201ENST00000502802 CETPP11597 493 aa4.79□□□□□ -1.64
HMGB1P3-201ENST00000502802 CDK4P11802 303 aa4.79□□□□□ -1.64
HMGB1P3-201ENST00000502802 ZNF18P17022 549 aa4.79□□□□□ -1.64
HMGB1P3-201ENST00000502802 SRD5A2P31213 254 aa4.79□□□□□ -1.64
HMGB1P3-201ENST00000502802 NR0B1P51843 470 aaKnown RBP4.79□□□□□ -1.64
HMGB1P3-201ENST00000502802 SRP54P61011 504 aaKnown RBP4.79□□□□□ -1.64
HMGB1P3-201ENST00000502802 MYL7Q01449 175 aa4.79□□□□□ -1.64
HMGB1P3-201ENST00000502802 PPP1R8Q12972 351 aaKnown RBP4.79□□□□□ -1.64
HMGB1P3-201ENST00000502802 INAQ16352 499 aa4.79□□□□□ -1.64
HMGB1P3-201ENST00000502802 LCN1P1Q5VSP4 162 aa4.79□□□□□ -1.64
HMGB1P3-201ENST00000502802 UGT3A1Q6NUS8 523 aa4.79□□□□□ -1.64
HMGB1P3-201ENST00000502802 CD164L2Q6UWJ8 174 aa4.79□□□□□ -1.64
HMGB1P3-201ENST00000502802 PRSS57Q6UWY2 283 aa4.79□□□□□ -1.64
HMGB1P3-201ENST00000502802 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.79□□□□□ -1.64
HMGB1P3-201ENST00000502802 FOXL2NBQ6ZUU3 175 aa4.79□□□□□ -1.64
HMGB1P3-201ENST00000502802 ADAMTSL2Q86TH1 951 aa4.79□□□□□ -1.64
HMGB1P3-201ENST00000502802 ADCK1Q86TW2 530 aa4.79□□□□□ -1.64
HMGB1P3-201ENST00000502802 ISCA2Q86U28 154 aa4.79□□□□□ -1.64
HMGB1P3-201ENST00000502802 NLRP14Q86W24 1093 aa4.79□□□□□ -1.64
HMGB1P3-201ENST00000502802 FBXW8Q8N3Y1 598 aa4.79□□□□□ -1.64
HMGB1P3-201ENST00000502802 TMEM99Q8N816 258 aa4.79□□□□□ -1.64
HMGB1P3-201ENST00000502802 KBTBD3Q8NAB2 608 aa4.79□□□□□ -1.64
HMGB1P3-201ENST00000502802 SMYD1Q8NB12 490 aa4.79□□□□□ -1.64
HMGB1P3-201ENST00000502802 TMEM185AQ8NFB2 350 aa4.79□□□□□ -1.64
HMGB1P3-201ENST00000502802 SLC24A4Q8NFF2 622 aa4.79□□□□□ -1.64
HMGB1P3-201ENST00000502802 DMBX1Q8NFW5 382 aa4.79□□□□□ -1.64
HMGB1P3-201ENST00000502802 OR7A2PQ8NGA2 310 aa4.79□□□□□ -1.64
HMGB1P3-201ENST00000502802 OR4C15Q8NGM1 316 aa4.79□□□□□ -1.64
HMGB1P3-201ENST00000502802 NUDCD2Q8WVJ2 157 aa4.79□□□□□ -1.64
HMGB1P3-201ENST00000502802 ULK4Q96C45 1275 aa4.79□□□□□ -1.64
HMGB1P3-201ENST00000502802 C16orf45Q96MC5 204 aaPredicted RBP4.79□□□□□ -1.64
HMGB1P3-201ENST00000502802 NSMCE2Q96MF7 247 aa4.79□□□□□ -1.64
HMGB1P3-201ENST00000502802 WWTR1Q9GZV5 400 aa4.79□□□□□ -1.64
HMGB1P3-201ENST00000502802 FLRT3Q9NZU0 649 aa4.79□□□□□ -1.64
HMGB1P3-201ENST00000502802 C19orf25Q9UFG5 118 aaPredicted RBP4.79□□□□□ -1.64
HMGB1P3-201ENST00000502802 MAN1B1Q9UKM7 699 aa4.79□□□□□ -1.64
HMGB1P3-201ENST00000502802 DNPEPQ9ULA0 475 aa4.79□□□□□ -1.64
HMGB1P3-201ENST00000502802 NCKAP1Q9Y2A7 1128 aa4.79□□□□□ -1.64
HMGB1P3-201ENST00000502802 TMED7Q9Y3B3 224 aa4.79□□□□□ -1.64
HMGB1P3-201ENST00000502802 ADGRL1O94910 1474 aa4.79□□□□□ -1.64
HMGB1P3-201ENST00000502802 TEX14Q8IWB6 1497 aa4.79□□□□□ -1.64
HMGB1P3-201ENST00000502802 RAPGEF6Q8TEU7 1601 aa4.79□□□□□ -1.64
HMGB1P3-201ENST00000502802 MAGI3Q5TCQ9 1506 aa4.78□□□□□ -1.64
HMGB1P3-201ENST00000502802 ATP10BO94823 1461 aa4.78□□□□□ -1.64
HMGB1P3-201ENST00000502802 ARHGAP42A6NI28 874 aa4.78□□□□□ -1.64
HMGB1P3-201ENST00000502802 SLC15A5A6NIM6 579 aa4.78□□□□□ -1.64
HMGB1P3-201ENST00000502802 SLC28A1O00337 649 aa4.78□□□□□ -1.64
HMGB1P3-201ENST00000502802 MAGEB2O15479 319 aa4.78□□□□□ -1.64
HMGB1P3-201ENST00000502802 PSMD3O43242 534 aa4.78□□□□□ -1.64
HMGB1P3-201ENST00000502802 GLRA3O75311 464 aa4.78□□□□□ -1.64
HMGB1P3-201ENST00000502802 MT-ATP6P00846 226 aa4.78□□□□□ -1.64
HMGB1P3-201ENST00000502802 TSHBP01222 138 aa4.78□□□□□ -1.64
HMGB1P3-201ENST00000502802 ATP1B1P05026 303 aa4.78□□□□□ -1.64
HMGB1P3-201ENST00000502802 SKILP12757 684 aa4.78□□□□□ -1.64
HMGB1P3-201ENST00000502802 ARF4P18085 180 aaPredicted RBP4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms