RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 SLC44A1Q8WWI5 657 aa4.21□□□□□ -1.73
BRCA1-204ENST00000412061 SEMA4DQ92854 862 aa4.21□□□□□ -1.73
BRCA1-204ENST00000412061 RFT1Q96AA3 541 aa4.21□□□□□ -1.73
BRCA1-204ENST00000412061 PGM2Q96G03 612 aa4.21□□□□□ -1.73
BRCA1-204ENST00000412061 TPD52L3Q96J77 140 aa4.21□□□□□ -1.73
BRCA1-204ENST00000412061 LRFN5Q96NI6 719 aa4.21□□□□□ -1.73
BRCA1-204ENST00000412061 PLIN2Q99541 437 aa4.21□□□□□ -1.73
BRCA1-204ENST00000412061 CMKLR1Q99788 373 aa4.21□□□□□ -1.73
BRCA1-204ENST00000412061 NTMT1Q9BV86 223 aa4.21□□□□□ -1.73
BRCA1-204ENST00000412061 RBM38Q9H0Z9 239 aaKnown RBP4.21□□□□□ -1.73
BRCA1-204ENST00000412061 DPEP3Q9H4B8 488 aa4.21□□□□□ -1.73
BRCA1-204ENST00000412061 CLSTN2Q9H4D0 955 aa4.21□□□□□ -1.73
BRCA1-204ENST00000412061 PHPT1Q9NRX4 125 aaPredicted RBP4.21□□□□□ -1.73
BRCA1-204ENST00000412061 B3GAT1Q9P2W7 334 aa4.21□□□□□ -1.73
BRCA1-204ENST00000412061 MALT1Q9UDY8 824 aa4.21□□□□□ -1.73
BRCA1-204ENST00000412061 FZD10Q9ULW2 581 aa4.21□□□□□ -1.73
BRCA1-204ENST00000412061 WDR83OSQ9Y284 106 aa4.21□□□□□ -1.73
BRCA1-204ENST00000412061 TMED3Q9Y3Q3 217 aa4.21□□□□□ -1.73
BRCA1-204ENST00000412061 PFASO15067 1338 aa4.21□□□□□ -1.73
BRCA1-204ENST00000412061 TAF1P21675 1872 aa4.21□□□□□ -1.74
BRCA1-204ENST00000412061 IGHV4-28A0A0C4DH34 117 aa4.21□□□□□ -1.74
BRCA1-204ENST00000412061 TMEM89A2RUT3 159 aa4.21□□□□□ -1.74
BRCA1-204ENST00000412061 CASTOR2A6NHX0 329 aa4.21□□□□□ -1.74
BRCA1-204ENST00000412061 ANKRD30BLA7E2S9 258 aa4.21□□□□□ -1.74
BRCA1-204ENST00000412061 F8VVB4 439 aa4.21□□□□□ -1.74
BRCA1-204ENST00000412061 F8VWA3 439 aa4.21□□□□□ -1.74
BRCA1-204ENST00000412061 H3BMM5 538 aa4.21□□□□□ -1.74
BRCA1-204ENST00000412061 J3KR12 359 aa4.21□□□□□ -1.74
BRCA1-204ENST00000412061 TNFRSF13BO14836 293 aaPredicted RBP4.21□□□□□ -1.74
BRCA1-204ENST00000412061 CTAGE5O15320 804 aa4.21□□□□□ -1.74
BRCA1-204ENST00000412061 RGS14O43566 566 aa4.21□□□□□ -1.74
BRCA1-204ENST00000412061 ACSL4O60488 711 aa4.21□□□□□ -1.74
BRCA1-204ENST00000412061 CIB2O75838 187 aa4.21□□□□□ -1.74
BRCA1-204ENST00000412061 MFN2O95140 757 aa4.21□□□□□ -1.74
BRCA1-204ENST00000412061 RRASP10301 218 aa4.21□□□□□ -1.74
BRCA1-204ENST00000412061 IRF2P14316 349 aa4.21□□□□□ -1.74
BRCA1-204ENST00000412061 HOXB2P14652 356 aa4.21□□□□□ -1.74
BRCA1-204ENST00000412061 PAX7P23759 505 aa4.21□□□□□ -1.74
BRCA1-204ENST00000412061 STX2P32856 288 aa4.21□□□□□ -1.74
BRCA1-204ENST00000412061 RPL21P46778 160 aaKnown RBP4.21□□□□□ -1.74
BRCA1-204ENST00000412061 KCNJ4P48050 445 aa4.21□□□□□ -1.74
BRCA1-204ENST00000412061 RFX5P48382 616 aaPredicted RBP4.21□□□□□ -1.74
BRCA1-204ENST00000412061 NR0B1P51843 470 aaKnown RBP4.21□□□□□ -1.74
BRCA1-204ENST00000412061 CLDN15P56746 228 aa4.21□□□□□ -1.74
BRCA1-204ENST00000412061 MBTD1Q05BQ5 628 aa4.21□□□□□ -1.74
BRCA1-204ENST00000412061 CRYZQ08257 329 aaKnown RBP4.21□□□□□ -1.74
BRCA1-204ENST00000412061 IL10RBQ08334 325 aa4.21□□□□□ -1.74
BRCA1-204ENST00000412061 RASGEF1BQ0VAM2 473 aa4.21□□□□□ -1.74
BRCA1-204ENST00000412061 GPS2Q13227 327 aa4.21□□□□□ -1.74
BRCA1-204ENST00000412061 IDI1Q13907 227 aa4.21□□□□□ -1.74
BRCA1-204ENST00000412061 RCN1Q15293 331 aa4.21□□□□□ -1.74
BRCA1-204ENST00000412061 CMPK2Q5EBM0 449 aa4.21□□□□□ -1.74
BRCA1-204ENST00000412061 GRTP1Q5TC63 336 aa4.21□□□□□ -1.74
BRCA1-204ENST00000412061 ZNF770Q6IQ21 691 aaPredicted RBP4.21□□□□□ -1.74
BRCA1-204ENST00000412061 C11orf87Q6NUJ2 197 aa4.21□□□□□ -1.74
BRCA1-204ENST00000412061 RGMBQ6NW40 437 aa4.21□□□□□ -1.74
BRCA1-204ENST00000412061 CD164L2Q6UWJ8 174 aa4.21□□□□□ -1.74
BRCA1-204ENST00000412061 TTC5Q8N0Z6 440 aa4.21□□□□□ -1.74
BRCA1-204ENST00000412061 OR2AK2Q8NG84 335 aa4.21□□□□□ -1.74
BRCA1-204ENST00000412061 SAP25Q8TEE9 199 aa4.21□□□□□ -1.74
BRCA1-204ENST00000412061 PPP4R1Q8TF05 950 aa4.21□□□□□ -1.74
BRCA1-204ENST00000412061 DHX58Q96C10 678 aa4.21□□□□□ -1.74
BRCA1-204ENST00000412061 FAM71F1Q96KD3 344 aaPredicted RBP4.21□□□□□ -1.74
BRCA1-204ENST00000412061 TSSK2Q96PF2 358 aa4.21□□□□□ -1.74
BRCA1-204ENST00000412061 JPH2Q9BR39 696 aaPredicted RBP4.21□□□□□ -1.74
BRCA1-204ENST00000412061 GPR61Q9BZJ8 451 aa4.21□□□□□ -1.74
BRCA1-204ENST00000412061 DCLRE1BQ9H816 532 aa4.21□□□□□ -1.74
BRCA1-204ENST00000412061 MIOSQ9NXC5 875 aa4.21□□□□□ -1.74
BRCA1-204ENST00000412061 PTTG2Q9NZH5 202 aa4.21□□□□□ -1.74
BRCA1-204ENST00000412061 KLHL8Q9P2G9 620 aaPredicted RBP4.21□□□□□ -1.74
BRCA1-204ENST00000412061 LRWD1Q9UFC0 647 aa4.21□□□□□ -1.74
BRCA1-204ENST00000412061 PCDHA7Q9UN72 937 aa4.21□□□□□ -1.74
BRCA1-204ENST00000412061 TNNQ9UQP3 1299 aa4.21□□□□□ -1.74
BRCA1-204ENST00000412061 LOXL2Q9Y4K0 774 aa4.21□□□□□ -1.74
BRCA1-204ENST00000412061 PTCH1Q13635 1447 aa4.2□□□□□ -1.74
BRCA1-204ENST00000412061 EIF4G1Q04637 1599 aaKnown RBP4.2□□□□□ -1.74
BRCA1-204ENST00000412061 MFSD2BA6NFX1 497 aa4.2□□□□□ -1.74
BRCA1-204ENST00000412061 ANKRD61A6NGH8 418 aa4.2□□□□□ -1.74
BRCA1-204ENST00000412061 NCF1BA6NI72 391 aaPredicted RBP4.2□□□□□ -1.74
BRCA1-204ENST00000412061 OR6C75A6NL08 312 aa4.2□□□□□ -1.74
BRCA1-204ENST00000412061 NCF1CA8MVU1 366 aaPredicted RBP4.2□□□□□ -1.74
BRCA1-204ENST00000412061 H0YIV9 168 aa4.2□□□□□ -1.74
BRCA1-204ENST00000412061 H3BNX3 289 aa4.2□□□□□ -1.74
BRCA1-204ENST00000412061 L7N2F9 121 aa4.2□□□□□ -1.74
BRCA1-204ENST00000412061 PRRG1O14668 218 aa4.2□□□□□ -1.74
BRCA1-204ENST00000412061 MED7O43513 233 aa4.2□□□□□ -1.74
BRCA1-204ENST00000412061 DCXO43602 365 aa4.2□□□□□ -1.74
BRCA1-204ENST00000412061 BUB1O43683 1085 aa4.2□□□□□ -1.74
BRCA1-204ENST00000412061 NME2P1O60361 137 aa4.2□□□□□ -1.74
BRCA1-204ENST00000412061 SNX3O60493 162 aa4.2□□□□□ -1.74
BRCA1-204ENST00000412061 LRP3O75074 770 aa4.2□□□□□ -1.74
BRCA1-204ENST00000412061 BBOX1O75936 387 aa4.2□□□□□ -1.74
BRCA1-204ENST00000412061 STBD1O95210 358 aa4.2□□□□□ -1.74
BRCA1-204ENST00000412061 WDPCPO95876 746 aa4.2□□□□□ -1.74
BRCA1-204ENST00000412061 GNSP15586 552 aa4.2□□□□□ -1.74
BRCA1-204ENST00000412061 HOXD3P31249 432 aaPredicted RBP4.2□□□□□ -1.74
BRCA1-204ENST00000412061 FCGR2BP31994 310 aaPredicted RBP4.2□□□□□ -1.74
BRCA1-204ENST00000412061 OR1D2P34982 312 aa4.2□□□□□ -1.74
BRCA1-204ENST00000412061 RFC4P35249 363 aa4.2□□□□□ -1.74
BRCA1-204ENST00000412061 ADRA1AP35348 466 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms