RNA–Protein interactions for RNA: ENST00000290650.8

UBR1-201, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR1, Length 7,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-201ENST00000290650 EMX2Q04743 252 aa4.62□□□□□ -1.67
UBR1-201ENST00000290650 LSAMPQ13449 338 aa4.62□□□□□ -1.67
UBR1-201ENST00000290650 CAMK1Q14012 370 aa4.62□□□□□ -1.67
UBR1-201ENST00000290650 HERC3Q15034 1050 aa4.62□□□□□ -1.67
UBR1-201ENST00000290650 TIGD6Q17RP2 521 aa4.62□□□□□ -1.67
UBR1-201ENST00000290650 CYBRD1Q53TN4 286 aa4.62□□□□□ -1.67
UBR1-201ENST00000290650 ZC3H14Q6PJT7 736 aaKnown RBP4.62□□□□□ -1.67
UBR1-201ENST00000290650 ZFP41Q8N8Y5 198 aa4.62□□□□□ -1.67
UBR1-201ENST00000290650 DRAXINQ8NBI3 349 aaPredicted RBP4.62□□□□□ -1.67
UBR1-201ENST00000290650 OR10H4Q8NGA5 316 aa4.62□□□□□ -1.67
UBR1-201ENST00000290650 ZNF563Q8TA94 476 aa4.62□□□□□ -1.67
UBR1-201ENST00000290650 ZSCAN5AQ9BUG6 496 aa4.62□□□□□ -1.67
UBR1-201ENST00000290650 SLC46A2Q9BY10 475 aa4.62□□□□□ -1.67
UBR1-201ENST00000290650 ZIM2Q9NZV7 527 aa4.62□□□□□ -1.67
UBR1-201ENST00000290650 COMMD3Q9UBI1 195 aa4.62□□□□□ -1.67
UBR1-201ENST00000290650 CA5BQ9Y2D0 317 aa4.62□□□□□ -1.67
UBR1-201ENST00000290650 OARD1Q9Y530 152 aa4.62□□□□□ -1.67
UBR1-201ENST00000290650 BRWD1Q9NSI6 2320 aa4.62□□□□□ -1.67
UBR1-201ENST00000290650 ZNF487B1APH4 448 aa4.62□□□□□ -1.67
UBR1-201ENST00000290650 IDH3BO43837 385 aa4.62□□□□□ -1.67
UBR1-201ENST00000290650 IL3P08700 152 aa4.62□□□□□ -1.67
UBR1-201ENST00000290650 LAMP1P11279 417 aa4.62□□□□□ -1.67
UBR1-201ENST00000290650 CEBPBP17676 345 aa4.62□□□□□ -1.67
UBR1-201ENST00000290650 PSMB5P28074 263 aa4.62□□□□□ -1.67
UBR1-201ENST00000290650 SLC6A11P48066 632 aa4.62□□□□□ -1.67
UBR1-201ENST00000290650 LBX1P52954 281 aa4.62□□□□□ -1.67
UBR1-201ENST00000290650 COPZ1P61923 177 aa4.62□□□□□ -1.67
UBR1-201ENST00000290650 PPIGQ13427 754 aaKnown RBP eCLIP4.62□□□□□ -1.673e-6■■□□□ 13.6
UBR1-201ENST00000290650 TAZQ16635 292 aa4.62□□□□□ -1.67
UBR1-201ENST00000290650 IFI44LQ53G44 452 aa4.62□□□□□ -1.67
UBR1-201ENST00000290650 KANK2Q63ZY3 851 aa4.62□□□□□ -1.67
UBR1-201ENST00000290650 C11orf88Q6PI97 169 aa4.62□□□□□ -1.67
UBR1-201ENST00000290650 TMIGD1Q6UXZ0 262 aa4.62□□□□□ -1.67
UBR1-201ENST00000290650 HSDL2Q6YN16 418 aa4.62□□□□□ -1.67
UBR1-201ENST00000290650 USP30Q70CQ3 517 aa4.62□□□□□ -1.67
UBR1-201ENST00000290650 SPATC1Q76KD6 591 aa4.62□□□□□ -1.67
UBR1-201ENST00000290650 TMPRSS9Q7Z410 1059 aa4.62□□□□□ -1.67
UBR1-201ENST00000290650 KBTBD6Q86V97 674 aa4.62□□□□□ -1.67
UBR1-201ENST00000290650 FAM46DQ8NEK8 389 aa4.62□□□□□ -1.67
UBR1-201ENST00000290650 TIFAQ96CG3 184 aa4.62□□□□□ -1.67
UBR1-201ENST00000290650 SLC38A2Q96QD8 506 aa4.62□□□□□ -1.67
UBR1-201ENST00000290650 MGME1Q9BQP7 344 aa4.62□□□□□ -1.67
UBR1-201ENST00000290650 SLC6A17Q9H1V8 727 aa4.62□□□□□ -1.67
UBR1-201ENST00000290650 STARD5Q9NSY2 213 aa4.62□□□□□ -1.67
UBR1-201ENST00000290650 VAPAQ9P0L0 249 aa4.62□□□□□ -1.67
UBR1-201ENST00000290650 ERVK-18Q9QC07 812 aa4.62□□□□□ -1.67
UBR1-201ENST00000290650 ZNF222Q9UK12 451 aa4.62□□□□□ -1.67
UBR1-201ENST00000290650 CORO2BQ9UQ03 480 aa4.62□□□□□ -1.67
UBR1-201ENST00000290650 PLXNA1Q9UIW2 1896 aa4.62□□□□□ -1.67
UBR1-201ENST00000290650 OR52A4PA6NMU1 304 aa4.62□□□□□ -1.67
UBR1-201ENST00000290650 FBP2O00757 339 aa4.62□□□□□ -1.67
UBR1-201ENST00000290650 TULP3O75386 442 aa4.62□□□□□ -1.67
UBR1-201ENST00000290650 SOX30O94993 753 aa4.62□□□□□ -1.67
UBR1-201ENST00000290650 SCELO95171 688 aa4.62□□□□□ -1.67
UBR1-201ENST00000290650 OR6A2O95222 327 aa4.62□□□□□ -1.67
UBR1-201ENST00000290650 MRPL3P09001 348 aaKnown RBP4.62□□□□□ -1.67
UBR1-201ENST00000290650 PRPS2P11908 318 aa4.62□□□□□ -1.67
UBR1-201ENST00000290650 PRPS1L1P21108 318 aa4.62□□□□□ -1.67
UBR1-201ENST00000290650 GTF2E2P29084 291 aaKnown RBP4.62□□□□□ -1.67
UBR1-201ENST00000290650 HLA-FP30511 346 aa4.62□□□□□ -1.67
UBR1-201ENST00000290650 SLC26A3P40879 764 aa4.62□□□□□ -1.67
UBR1-201ENST00000290650 CCR8P51685 355 aa4.62□□□□□ -1.67
UBR1-201ENST00000290650 ARSFP54793 590 aa4.62□□□□□ -1.67
UBR1-201ENST00000290650 GPR33Q49SQ1 333 aa4.62□□□□□ -1.67
UBR1-201ENST00000290650 KCTD11Q693B1 232 aa4.62□□□□□ -1.67
UBR1-201ENST00000290650 SLC8B1Q6J4K2 584 aa4.62□□□□□ -1.67
UBR1-201ENST00000290650 VRK3Q8IV63 474 aa4.62□□□□□ -1.67
UBR1-201ENST00000290650 DTWD1Q8N5C7 304 aa4.62□□□□□ -1.67
UBR1-201ENST00000290650 Q8N9G6 341 aaPredicted RBP4.62□□□□□ -1.67
UBR1-201ENST00000290650 OR5AR1Q8NGP9 310 aa4.62□□□□□ -1.67
UBR1-201ENST00000290650 OR5K1Q8NHB7 308 aa4.62□□□□□ -1.67
UBR1-201ENST00000290650 DEPDC7Q96QD5 511 aa4.62□□□□□ -1.67
UBR1-201ENST00000290650 MTRRQ9UBK8 725 aa4.62□□□□□ -1.67
UBR1-201ENST00000290650 SSR3Q9UNL2 185 aa4.62□□□□□ -1.67
UBR1-201ENST00000290650 ASB1Q9Y576 335 aa4.62□□□□□ -1.67
UBR1-201ENST00000290650 PCDHB3Q9Y5E6 796 aa4.62□□□□□ -1.67
UBR1-201ENST00000290650 WDR81Q562E7 1941 aa4.62□□□□□ -1.67
UBR1-201ENST00000290650 MYO16Q9Y6X6 1858 aa4.62□□□□□ -1.67
UBR1-201ENST00000290650 A0A1B0GTW7 788 aa4.62□□□□□ -1.67
UBR1-201ENST00000290650 QSOX1O00391 747 aa4.62□□□□□ -1.67
UBR1-201ENST00000290650 PMS2P3Q13401 168 aa4.62□□□□□ -1.67
UBR1-201ENST00000290650 IL18R1Q13478 541 aa4.62□□□□□ -1.67
UBR1-201ENST00000290650 TSTQ16762 297 aaKnown RBP4.62□□□□□ -1.67
UBR1-201ENST00000290650 DENND5AQ6IQ26 1287 aa4.62□□□□□ -1.67
UBR1-201ENST00000290650 OLIG3Q7RTU3 272 aa4.62□□□□□ -1.67
UBR1-201ENST00000290650 UBE2Q1Q7Z7E8 422 aa4.62□□□□□ -1.67
UBR1-201ENST00000290650 AMER2Q8N7J2 671 aa4.62□□□□□ -1.67
UBR1-201ENST00000290650 ARRDC2Q8TBH0 407 aa4.62□□□□□ -1.67
UBR1-201ENST00000290650 BPIFB1Q8TDL5 484 aa4.62□□□□□ -1.67
UBR1-201ENST00000290650 TADA1Q96BN2 335 aa4.62□□□□□ -1.67
UBR1-201ENST00000290650 ISOC1Q96CN7 298 aa4.62□□□□□ -1.67
UBR1-201ENST00000290650 ZNF382Q96SR6 550 aa4.62□□□□□ -1.67
UBR1-201ENST00000290650 POLE3Q9NRF9 147 aa4.62□□□□□ -1.67
UBR1-201ENST00000290650 PNO1Q9NRX1 252 aaKnown RBP4.62□□□□□ -1.67
UBR1-201ENST00000290650 MARCH5Q9NX47 278 aa4.62□□□□□ -1.67
UBR1-201ENST00000290650 ELOVL2Q9NXB9 296 aa4.62□□□□□ -1.67
UBR1-201ENST00000290650 BRCA1P38398 1863 aaKnown RBP4.62□□□□□ -1.67
UBR1-201ENST00000290650 DYRK3O43781 588 aa4.62□□□□□ -1.67
UBR1-201ENST00000290650 ADAMTS4O75173 837 aa4.62□□□□□ -1.67
UBR1-201ENST00000290650 CA3P07451 260 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms