RNA–Protein interactions for RNA: ENST00000288840.9

SMAD6-201, Transcript of SMAD family member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD6, Length 3,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-201ENST00000288840 EPHX1P07099 455 aa15.32■□□□□ 0.04
SMAD6-201ENST00000288840 DGKGP49619 791 aa15.32■□□□□ 0.04
SMAD6-201ENST00000288840 TBPL1P62380 186 aa15.32■□□□□ 0.04
SMAD6-201ENST00000288840 EXOC3L2Q2M3D2 409 aa15.32■□□□□ 0.04
SMAD6-201ENST00000288840 CEACAM20Q6UY09 585 aa15.32■□□□□ 0.04
SMAD6-201ENST00000288840 METTL3Q86U44 580 aaKnown RBP15.32■□□□□ 0.04
SMAD6-201ENST00000288840 C17orf64Q86WR6 236 aa15.32■□□□□ 0.04
SMAD6-201ENST00000288840 FAM20CQ8IXL6 584 aa15.32■□□□□ 0.04
SMAD6-201ENST00000288840 MSRB3Q8IXL7 192 aa15.32■□□□□ 0.04
SMAD6-201ENST00000288840 ZNF296Q8WUU4 475 aaPredicted RBP15.32■□□□□ 0.04
SMAD6-201ENST00000288840 ASB11Q8WXH4 323 aa15.32■□□□□ 0.04
SMAD6-201ENST00000288840 KAT2AQ92830 837 aa15.32■□□□□ 0.04
SMAD6-201ENST00000288840 COL21A1Q96P44 957 aa15.32■□□□□ 0.04
SMAD6-201ENST00000288840 ZBTB20Q9HC78 741 aaPredicted RBP15.32■□□□□ 0.04
SMAD6-201ENST00000288840 TVP23BQ9NYZ1 205 aa15.32■□□□□ 0.04
SMAD6-201ENST00000288840 MYOFQ9NZM1 2061 aa15.32■□□□□ 0.04
SMAD6-201ENST00000288840 PIKFYVEQ9Y2I7 2098 aa15.31■□□□□ 0.04
SMAD6-201ENST00000288840 SIP14410 1827 aa15.31■□□□□ 0.04
SMAD6-201ENST00000288840 FAM227AF5H4B4 570 aa15.31■□□□□ 0.04
SMAD6-201ENST00000288840 SNPHO15079 494 aa15.31■□□□□ 0.04
SMAD6-201ENST00000288840 ADAMDEC1O15204 470 aa15.31■□□□□ 0.04
SMAD6-201ENST00000288840 PRR35P0CG20 571 aa15.31■□□□□ 0.04
SMAD6-201ENST00000288840 SSR2P43308 183 aa15.31■□□□□ 0.04
SMAD6-201ENST00000288840 NKX2-5P52952 324 aaPredicted RBP15.31■□□□□ 0.04
SMAD6-201ENST00000288840 ST3GAL4Q11206 333 aa15.31■□□□□ 0.04
SMAD6-201ENST00000288840 UGT8Q16880 541 aa15.31■□□□□ 0.04
SMAD6-201ENST00000288840 DCDC5Q6ZRR9 648 aa15.31■□□□□ 0.04
SMAD6-201ENST00000288840 KLHDC8BQ8IXV7 354 aa15.31■□□□□ 0.04
SMAD6-201ENST00000288840 FIBINQ8TAL6 211 aa15.31■□□□□ 0.04
SMAD6-201ENST00000288840 STARD8Q92502 1023 aa15.31■□□□□ 0.04
SMAD6-201ENST00000288840 FATE1Q969F0 183 aa15.31■□□□□ 0.04
SMAD6-201ENST00000288840 PDLIM5Q96HC4 596 aaKnown RBP15.31■□□□□ 0.04
SMAD6-201ENST00000288840 Q96MT0 163 aa15.31■□□□□ 0.04
SMAD6-201ENST00000288840 MACROD1Q9BQ69 325 aa15.31■□□□□ 0.04
SMAD6-201ENST00000288840 TRMT61BQ9BVS5 477 aaKnown RBP15.31■□□□□ 0.04
SMAD6-201ENST00000288840 PAK1IP1Q9NWT1 392 aaPredicted RBP15.31■□□□□ 0.04
SMAD6-201ENST00000288840 AHSPQ9NZD4 102 aa15.31■□□□□ 0.04
SMAD6-201ENST00000288840 STOX2Q9P2F5 926 aaPredicted RBP15.31■□□□□ 0.04
SMAD6-201ENST00000288840 BTBD3Q9Y2F9 522 aa15.31■□□□□ 0.04
SMAD6-201ENST00000288840 LYVE1Q9Y5Y7 322 aa15.31■□□□□ 0.04
SMAD6-201ENST00000288840 LAMA3Q16787 3333 aa15.31■□□□□ 0.04
SMAD6-201ENST00000288840 FEZF1A0PJY2 475 aa15.31■□□□□ 0.04
SMAD6-201ENST00000288840 C1SP09871 688 aa15.31■□□□□ 0.04
SMAD6-201ENST00000288840 C8orf89P0DMQ9 161 aa15.31■□□□□ 0.04
SMAD6-201ENST00000288840 RXRGP48443 463 aa15.31■□□□□ 0.04
SMAD6-201ENST00000288840 RNF144AP50876 292 aaPredicted RBP15.31■□□□□ 0.04
SMAD6-201ENST00000288840 NFE2L1Q14494 772 aa15.31■□□□□ 0.04
SMAD6-201ENST00000288840 SLAIN1Q8ND83 568 aa15.31■□□□□ 0.04
SMAD6-201ENST00000288840 OVCA2Q8WZ82 227 aa15.31■□□□□ 0.04
SMAD6-201ENST00000288840 SEMA3GQ9NS98 782 aa15.31■□□□□ 0.04
SMAD6-201ENST00000288840 KLHL20Q9Y2M5 609 aa15.31■□□□□ 0.04
SMAD6-201ENST00000288840 CACNA1CQ13936 2221 aa15.31■□□□□ 0.04
SMAD6-201ENST00000288840 FAM155AB1AL88 458 aaPredicted RBP15.31■□□□□ 0.04
SMAD6-201ENST00000288840 H7BY64 318 aa15.31■□□□□ 0.04
SMAD6-201ENST00000288840 H7C0S8 307 aa15.31■□□□□ 0.04
SMAD6-201ENST00000288840 MYL12BO14950 172 aa15.31■□□□□ 0.04
SMAD6-201ENST00000288840 WISP3O95389 354 aaPredicted RBP15.31■□□□□ 0.04
SMAD6-201ENST00000288840 CBSLP0DN79 551 aa15.31■□□□□ 0.04
SMAD6-201ENST00000288840 VIPR1P32241 457 aa15.31■□□□□ 0.04
SMAD6-201ENST00000288840 CBSP35520 551 aa15.31■□□□□ 0.04
SMAD6-201ENST00000288840 TCTN1Q2MV58 587 aa15.31■□□□□ 0.04
SMAD6-201ENST00000288840 SPATS1Q496A3 300 aa15.31■□□□□ 0.04
SMAD6-201ENST00000288840 RPS26P11Q5JNZ5 115 aaPredicted RBP15.31■□□□□ 0.04
SMAD6-201ENST00000288840 ZNF551Q7Z340 670 aaPredicted RBP15.31■□□□□ 0.04
SMAD6-201ENST00000288840 GATAD2AQ86YP4 633 aa15.31■□□□□ 0.04
SMAD6-201ENST00000288840 GLYATL1Q969I3 302 aa15.31■□□□□ 0.04
SMAD6-201ENST00000288840 DUS3LQ96G46 650 aaKnown RBP15.31■□□□□ 0.04
SMAD6-201ENST00000288840 PRAP1Q96NZ9 151 aa15.31■□□□□ 0.04
SMAD6-201ENST00000288840 MBOAT4Q96T53 435 aa15.31■□□□□ 0.04
SMAD6-201ENST00000288840 SNTG1Q9NSN8 517 aa15.31■□□□□ 0.04
SMAD6-201ENST00000288840 FAIMQ9NVQ4 179 aa15.31■□□□□ 0.04
SMAD6-201ENST00000288840 MS4A12Q9NXJ0 267 aa15.31■□□□□ 0.04
SMAD6-201ENST00000288840 PCDHB11Q9Y5F2 797 aa15.31■□□□□ 0.04
SMAD6-201ENST00000288840 LOC110117498-PIK3R3F6TDL0 507 aa15.3■□□□□ 0.04
SMAD6-201ENST00000288840 RETP07949 1114 aa15.3■□□□□ 0.04
SMAD6-201ENST00000288840 CST5P28325 142 aaPredicted RBP15.3■□□□□ 0.04
SMAD6-201ENST00000288840 C8orf82Q6P1X6 216 aaPredicted RBP15.3■□□□□ 0.04
SMAD6-201ENST00000288840 CHPFQ8IZ52 775 aa15.3■□□□□ 0.04
SMAD6-201ENST00000288840 CXorf40AQ8TE69 158 aa15.3■□□□□ 0.04
SMAD6-201ENST00000288840 S100ZQ8WXG8 99 aa15.3■□□□□ 0.04
SMAD6-201ENST00000288840 FERD3LQ96RJ6 166 aa15.3■□□□□ 0.04
SMAD6-201ENST00000288840 XKR8Q9H6D3 395 aa15.3■□□□□ 0.04
SMAD6-201ENST00000288840 IL36AQ9UHA7 158 aa15.3■□□□□ 0.04
SMAD6-201ENST00000288840 ZNF510Q9Y2H8 683 aa15.3■□□□□ 0.04
SMAD6-201ENST00000288840 KLK8O60259 260 aa15.3■□□□□ 0.04
SMAD6-201ENST00000288840 IL3P08700 152 aa15.3■□□□□ 0.04
SMAD6-201ENST00000288840 RPS3P23396 243 aaKnown RBP eCLIP15.3■□□□□ 0.04
SMAD6-201ENST00000288840 IFNA8P32881 189 aa15.3■□□□□ 0.04
SMAD6-201ENST00000288840 VIPR2P41587 438 aa15.3■□□□□ 0.04
SMAD6-201ENST00000288840 PTPN5P54829 565 aa15.3■□□□□ 0.04
SMAD6-201ENST00000288840 TARDBPQ13148 414 aaKnown RBP eCLIP15.3■□□□□ 0.043e-10■■■■■ 46.7
SMAD6-201ENST00000288840 RAB33AQ14088 237 aa15.3■□□□□ 0.04
SMAD6-201ENST00000288840 TSTQ16762 297 aaKnown RBP15.3■□□□□ 0.04
SMAD6-201ENST00000288840 DPY19L1Q2PZI1 675 aa15.3■□□□□ 0.04
SMAD6-201ENST00000288840 CCSAPQ6IQ19 270 aaPredicted RBP15.3■□□□□ 0.04
SMAD6-201ENST00000288840 ZNF852Q6ZMS4 543 aa15.3■□□□□ 0.04
SMAD6-201ENST00000288840 OLIG3Q7RTU3 272 aa15.3■□□□□ 0.04
SMAD6-201ENST00000288840 RIMKLAQ8IXN7 391 aa15.3■□□□□ 0.04
SMAD6-201ENST00000288840 WDR48Q8TAF3 677 aa15.3■□□□□ 0.04
SMAD6-201ENST00000288840 UBASH3BQ8TF42 649 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms