RNA–Protein interactions for RNA: ENSMUST00000085546.12

Hmgb1-201, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 2,838 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-201ENSMUST00000085546 2610008E11RikG3X964 669 aa9.43□□□□□ -0.9
Hmgb1-201ENSMUST00000085546 Polr2jO08740 117 aaKnown RBP9.43□□□□□ -0.9
Hmgb1-201ENSMUST00000085546 Stc2O88452 296 aa9.43□□□□□ -0.9
Hmgb1-201ENSMUST00000085546 Tpst2O88856 376 aa9.43□□□□□ -0.9
Hmgb1-201ENSMUST00000085546 Slc11a1P41251 548 aa9.43□□□□□ -0.9
Hmgb1-201ENSMUST00000085546 Rpl6P47911 296 aaKnown RBP9.43□□□□□ -0.9
Hmgb1-201ENSMUST00000085546 SftpdP50404 374 aa9.43□□□□□ -0.9
Hmgb1-201ENSMUST00000085546 Tbx1P70323 479 aa9.43□□□□□ -0.9
Hmgb1-201ENSMUST00000085546 Dnajb14Q149L6 379 aa9.43□□□□□ -0.9
Hmgb1-201ENSMUST00000085546 Rtkn2Q14B46 604 aa9.43□□□□□ -0.9
Hmgb1-201ENSMUST00000085546 Slc2a9Q3T9X0 538 aa9.43□□□□□ -0.9
Hmgb1-201ENSMUST00000085546 Srebf2Q3U1N2 1130 aa9.43□□□□□ -0.9
Hmgb1-201ENSMUST00000085546 MagixQ4KL35 324 aa9.43□□□□□ -0.9
Hmgb1-201ENSMUST00000085546 Coq8bQ566J8 533 aa9.43□□□□□ -0.9
Hmgb1-201ENSMUST00000085546 Scnn1aQ61180 699 aa9.43□□□□□ -0.9
Hmgb1-201ENSMUST00000085546 Phlda1Q62392 405 aa9.43□□□□□ -0.9
Hmgb1-201ENSMUST00000085546 Alg8Q6P8H8 526 aa9.43□□□□□ -0.9
Hmgb1-201ENSMUST00000085546 Ip6k1Q6PD10 433 aa9.43□□□□□ -0.9
Hmgb1-201ENSMUST00000085546 Klhl6Q6V595 619 aa9.43□□□□□ -0.9
Hmgb1-201ENSMUST00000085546 Ssx9Q6XAS3 170 aa9.43□□□□□ -0.9
Hmgb1-201ENSMUST00000085546 Fnip2Q80TD3 1108 aa9.43□□□□□ -0.9
Hmgb1-201ENSMUST00000085546 Adam30Q811Q3 732 aa9.43□□□□□ -0.9
Hmgb1-201ENSMUST00000085546 Dcaf12l1Q8CBW4 501 aa9.43□□□□□ -0.9
Hmgb1-201ENSMUST00000085546 Hpf1Q8CFE2 346 aa9.43□□□□□ -0.9
Hmgb1-201ENSMUST00000085546 Esco2Q8CIB9 592 aaKnown RBP9.43□□□□□ -0.9
Hmgb1-201ENSMUST00000085546 Q8K039 155 aa9.43□□□□□ -0.9
Hmgb1-201ENSMUST00000085546 Pitrm1Q8K411 1036 aaKnown RBP9.43□□□□□ -0.9
Hmgb1-201ENSMUST00000085546 Glb1lQ8VC60 646 aa9.43□□□□□ -0.9
Hmgb1-201ENSMUST00000085546 Olfr390Q8VEZ7 311 aa9.43□□□□□ -0.9
Hmgb1-201ENSMUST00000085546 TirapQ99JY1 241 aa9.43□□□□□ -0.9
Hmgb1-201ENSMUST00000085546 Pink1Q99MQ3 580 aa9.43□□□□□ -0.9
Hmgb1-201ENSMUST00000085546 Pdzk1ip1Q9CQH0 114 aa9.43□□□□□ -0.9
Hmgb1-201ENSMUST00000085546 Cotl1Q9CQI6 142 aa9.43□□□□□ -0.9
Hmgb1-201ENSMUST00000085546 Mrps14Q9CR88 128 aa9.43□□□□□ -0.9
Hmgb1-201ENSMUST00000085546 Med7Q9CZB6 233 aa9.43□□□□□ -0.9
Hmgb1-201ENSMUST00000085546 Ints12Q9D168 461 aa9.43□□□□□ -0.9
Hmgb1-201ENSMUST00000085546 Mrps15Q9DC71 258 aaKnown RBP9.43□□□□□ -0.9
Hmgb1-201ENSMUST00000085546 Xylt2Q9EPL0 865 aa9.43□□□□□ -0.9
Hmgb1-201ENSMUST00000085546 Ddi2A2ADY9 399 aa9.43□□□□□ -0.9
Hmgb1-201ENSMUST00000085546 Wdr76A6PWY4 622 aa9.43□□□□□ -0.9
Hmgb1-201ENSMUST00000085546 Zfp738B8JJX8 793 aa9.43□□□□□ -0.9
Hmgb1-201ENSMUST00000085546 Mterf1bB9EJ57 379 aa9.43□□□□□ -0.9
Hmgb1-201ENSMUST00000085546 Vmn2r84D3YWE3 849 aa9.43□□□□□ -0.9
Hmgb1-201ENSMUST00000085546 Vmn2r7E9PYL5 915 aa9.43□□□□□ -0.9
Hmgb1-201ENSMUST00000085546 Olfr1360K9J6X0 313 aa9.43□□□□□ -0.9
Hmgb1-201ENSMUST00000085546 DhodhO35435 395 aa9.43□□□□□ -0.9
Hmgb1-201ENSMUST00000085546 Hsd17b12O70503 312 aa9.43□□□□□ -0.9
Hmgb1-201ENSMUST00000085546 Zfp60P16374 707 aa9.43□□□□□ -0.9
Hmgb1-201ENSMUST00000085546 Il7rP16872 459 aa9.43□□□□□ -0.9
Hmgb1-201ENSMUST00000085546 FurinP23188 793 aa9.43□□□□□ -0.9
Hmgb1-201ENSMUST00000085546 Mep1aP28825 747 aa9.43□□□□□ -0.9
Hmgb1-201ENSMUST00000085546 Rab23P35288 237 aa9.43□□□□□ -0.9
Hmgb1-201ENSMUST00000085546 Sox3P53784 375 aa9.43□□□□□ -0.9
Hmgb1-201ENSMUST00000085546 Mccc2Q3ULD5 563 aa9.43□□□□□ -0.9
Hmgb1-201ENSMUST00000085546 SelenohQ3UQA7 116 aa9.43□□□□□ -0.9
Hmgb1-201ENSMUST00000085546 Ccdc185Q3V118 621 aa9.43□□□□□ -0.9
Hmgb1-201ENSMUST00000085546 Cfhr2Q4LDF6 332 aa9.43□□□□□ -0.9
Hmgb1-201ENSMUST00000085546 Tspan7Q62283 249 aa9.43□□□□□ -0.9
Hmgb1-201ENSMUST00000085546 Cntn4Q69Z26 1026 aa9.43□□□□□ -0.9
Hmgb1-201ENSMUST00000085546 Ggt6Q6PDE7 497 aa9.43□□□□□ -0.9
Hmgb1-201ENSMUST00000085546 Olfr1359Q7TQU5 313 aa9.43□□□□□ -0.9
Hmgb1-201ENSMUST00000085546 Zfp606Q7TSV0 794 aa9.43□□□□□ -0.9
Hmgb1-201ENSMUST00000085546 Tdp1Q8BJ37 609 aa9.43□□□□□ -0.9
Hmgb1-201ENSMUST00000085546 Tmbim1Q8BJZ3 309 aa9.43□□□□□ -0.9
Hmgb1-201ENSMUST00000085546 Leng9Q8BTN6 485 aa9.43□□□□□ -0.9
Hmgb1-201ENSMUST00000085546 Ptges2Q8BWM0 384 aa9.43□□□□□ -0.9
Hmgb1-201ENSMUST00000085546 Pnpla8Q8K1N1 776 aa9.43□□□□□ -0.9
Hmgb1-201ENSMUST00000085546 Wdr11Q8K1X1 1223 aa9.43□□□□□ -0.9
Hmgb1-201ENSMUST00000085546 Fam199xQ8K2D0 388 aa9.43□□□□□ -0.9
Hmgb1-201ENSMUST00000085546 Pcdhb16Q91Y03 802 aa9.43□□□□□ -0.9
Hmgb1-201ENSMUST00000085546 St3gal4Q91Y74 333 aa9.43□□□□□ -0.9
Hmgb1-201ENSMUST00000085546 Dio3Q91ZI8 304 aa9.43□□□□□ -0.9
Hmgb1-201ENSMUST00000085546 TrabdQ99JY4 376 aa9.43□□□□□ -0.9
Hmgb1-201ENSMUST00000085546 Rassf1Q99MK9 340 aa9.43□□□□□ -0.9
Hmgb1-201ENSMUST00000085546 Scd3Q99PL7 359 aa9.43□□□□□ -0.9
Hmgb1-201ENSMUST00000085546 Use1Q9CQ56 270 aa9.43□□□□□ -0.9
Hmgb1-201ENSMUST00000085546 Dnmt3lQ9CWR8 421 aaKnown RBP9.43□□□□□ -0.9
Hmgb1-201ENSMUST00000085546 Snx20Q9D2Y5 313 aa9.43□□□□□ -0.9
Hmgb1-201ENSMUST00000085546 Samt4Q9D4X6 233 aa9.43□□□□□ -0.9
Hmgb1-201ENSMUST00000085546 PgcQ9D7R7 392 aa9.43□□□□□ -0.9
Hmgb1-201ENSMUST00000085546 Doc2gQ9ESN1 387 aa9.43□□□□□ -0.9
Hmgb1-201ENSMUST00000085546 Upk1bQ9Z2C6 260 aa9.43□□□□□ -0.9
Hmgb1-201ENSMUST00000085546 Oasl2Q9Z2F2 508 aa9.43□□□□□ -0.9
Hmgb1-201ENSMUST00000085546 Heg1E9Q7X6 1337 aa9.42□□□□□ -0.9
Hmgb1-201ENSMUST00000085546 D3Z070 196 aa9.42□□□□□ -0.9
Hmgb1-201ENSMUST00000085546 Lipo4D3Z608 396 aa9.42□□□□□ -0.9
Hmgb1-201ENSMUST00000085546 Mt-CybP00158 381 aa9.42□□□□□ -0.9
Hmgb1-201ENSMUST00000085546 Ap2a1P17426 977 aaKnown RBP9.42□□□□□ -0.9
Hmgb1-201ENSMUST00000085546 Hnf4aP49698 474 aa9.42□□□□□ -0.9
Hmgb1-201ENSMUST00000085546 P58686 83 aa9.42□□□□□ -0.9
Hmgb1-201ENSMUST00000085546 PamP97467 979 aa9.42□□□□□ -0.9
Hmgb1-201ENSMUST00000085546 G6pdxQ00612 515 aa9.42□□□□□ -0.9
Hmgb1-201ENSMUST00000085546 Epha4Q03137 986 aa9.42□□□□□ -0.9
Hmgb1-201ENSMUST00000085546 Tmem173Q3TBT3 378 aa9.42□□□□□ -0.9
Hmgb1-201ENSMUST00000085546 Sec24aQ3U2P1 1090 aa9.42□□□□□ -0.9
Hmgb1-201ENSMUST00000085546 TepsinQ3U3N6 573 aa9.42□□□□□ -0.9
Hmgb1-201ENSMUST00000085546 Mtmr11Q3V1L6 700 aa9.42□□□□□ -0.9
Hmgb1-201ENSMUST00000085546 Sgk494Q5SYL1 278 aa9.42□□□□□ -0.9
Hmgb1-201ENSMUST00000085546 Ripk1Q60855 656 aa9.42□□□□□ -0.9
Hmgb1-201ENSMUST00000085546 Ift52Q62559 426 aa9.42□□□□□ -0.9
Retrieved 100 of 22,080 RNA–protein pairs in 40.2 ms