RNA–Protein interactions for RNA: ENSMUST00000028280.13

Col5a1-201, Transcript of Collagen alpha-1(V) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col5a1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1-201ENSMUST00000028280 Syndig1lQ3USQ7 237 aa13.59□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Gm906Q3V0M1 1017 aa13.59□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Rhox10Q4TU83 196 aa13.59□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Olfr1308Q7TQX0 320 aa13.59□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Atp13a2Q9CTG6 1169 aa13.59□□□□□ -0.23
Col5a1-201ENSMUST00000028280 AhspQ9CY02 102 aa13.59□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Necab3Q9D6J4 353 aa13.59□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Slco1a4Q9EP96 670 aa13.59□□□□□ -0.23
Col5a1-201ENSMUST00000028280 RxrbP28704 520 aa13.58□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Ldb1P70662 411 aa13.58□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Q3USZ8 430 aa13.58□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Macrod2Q3UYG8 475 aa13.58□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Laptm5Q61168 261 aa13.58□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Znf354aQ61751 572 aa13.58□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Proser3Q7TSA6 634 aa13.58□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Mptx1Q8R1M8 219 aa13.58□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Vmn1r21Q8R2C6 297 aa13.58□□□□□ -0.23
Col5a1-201ENSMUST00000028280 MINDY3Q9CV28 444 aa13.58□□□□□ -0.23
Col5a1-201ENSMUST00000028280 Rpl13a-ps1A0A140T8K2 203 aaKnown RBP13.58□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Gm3259D3YUK0 475 aa13.58□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Dpysl4O35098 572 aa13.58□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Tnfrsf18O35714 228 aa13.58□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Wnt10bP48614 389 aa13.58□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Cpne2P59108 548 aa13.58□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Aarsd1Q3THG9 412 aa13.58□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Eif1aQ60872 144 aaKnown RBP13.58□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Xpnpep1Q6P1B1 623 aa13.58□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Pyhin1Q8BV49 420 aa13.58□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Slco6c1Q8C0X7 706 aa13.58□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Pcdha6Q91Y14 946 aa13.58□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Borcs6Q9D6W8 360 aa13.58□□□□□ -0.24
Col5a1-201ENSMUST00000028280 PmpcaQ9DC61 524 aa13.58□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Sema6cQ9WTM3 931 aa13.58□□□□□ -0.24
Col5a1-201ENSMUST00000028280 A0A1L1SV24 88 aa13.58□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Ighg3A0A1Y7VJN6 399 aa13.58□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Gm6592A2AHC7 168 aa13.58□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Zfp81B8JJZ7 531 aa13.58□□□□□ -0.24
Col5a1-201ENSMUST00000028280 BC117090L7N257 96 aa13.58□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Chrnb1P09690 501 aa13.58□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Cd48P18181 240 aa13.58□□□□□ -0.24
Col5a1-201ENSMUST00000028280 PnpP23492 289 aa13.58□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Meis2P97367 477 aa13.58□□□□□ -0.24
Col5a1-201ENSMUST00000028280 UradQ283N4 178 aa13.58□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Pde12Q3TIU4 608 aa13.58□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Trcg1Q58Y74 825 aa13.58□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Olfr855Q7TRF8 312 aa13.58□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Q8BHB7 409 aa13.58□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Svs2Q8BS30 375 aa13.58□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Bbs4Q8C1Z7 520 aa13.58□□□□□ -0.24
Col5a1-201ENSMUST00000028280 RhoqQ8R527 205 aa13.58□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Wrnip1Q91XU0 660 aa13.58□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Q9DAY5 185 aa13.58□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Gm5724L7N264 670 aa13.58□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Ckmt1P30275 418 aaKnown RBP13.58□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Tas2r123P59528 333 aa13.58□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Serpina7P61939 418 aa13.58□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Rps3aP97351 264 aaKnown RBP13.58□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Tle3Q08122 772 aaKnown RBP13.58□□□□□ -0.24
Col5a1-201ENSMUST00000028280 ADGRF3Q58Y75 991 aa13.58□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Adam29Q811Q4 763 aa13.58□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Galnt12Q8BGT9 576 aa13.58□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Trim61Q8JZK6 461 aa13.58□□□□□ -0.24
Col5a1-201ENSMUST00000028280 SelenomQ8VHC3 145 aa13.58□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Clca3a2Q9EQR4 902 aa13.58□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Clca3a1Q9QX15 902 aa13.58□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Ebf2O08792 575 aa13.58□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Zfp37P17141 594 aa13.58□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Lrrn4P59383 733 aa13.58□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Rit1P70426 219 aa13.58□□□□□ -0.24
Col5a1-201ENSMUST00000028280 BC080695Q66JY9 481 aa13.58□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Best3Q6H1V1 669 aa13.58□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Creb3l2Q8BH52 521 aa13.58□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Samd7Q8C8Y5 445 aa13.58□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Pcdhgc3Q91XX1 934 aa13.58□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Vmn2r21K7N6Y7 853 aa13.58□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Vmn2r20L7N2B1 853 aa13.58□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Nthl1O35980 300 aa13.58□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Mtnd1P03888 318 aa13.58□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Lman2lP59481 347 aa13.58□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Fgf1P61148 155 aa13.58□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Sez6l2Q4V9Z5 910 aa13.58□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Slfnl1Q8BHW9 410 aa13.58□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Sh3rf3Q8C120 878 aa13.58□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Inpp5kQ8C5L6 468 aa13.58□□□□□ -0.24
Col5a1-201ENSMUST00000028280 NoboxQ8VIH1 527 aa13.58□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Havcr2Q8VIM0 281 aa13.58□□□□□ -0.24
Col5a1-201ENSMUST00000028280 CmasQ99KK2 432 aaKnown RBP13.58□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Fank1Q9DAM9 344 aa13.58□□□□□ -0.24
Col5a1-201ENSMUST00000028280 4930558K02RikE0CXC6 182 aa13.57□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Cyp21P03940 487 aa13.57□□□□□ -0.24
Col5a1-201ENSMUST00000028280 LumP51885 338 aa13.57□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Q6P2K3 674 aa13.57□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Phf11aQ8BVM9 293 aa13.57□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Q8C0X8 640 aa13.57□□□□□ -0.24
Col5a1-201ENSMUST00000028280 NdnfQ8C119 568 aa13.57□□□□□ -0.24
Col5a1-201ENSMUST00000028280 AmtQ8CFA2 403 aaKnown RBP13.57□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Slc12a9Q99MR3 914 aa13.57□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Gm7792A0A0J9YU01 481 aa13.57□□□□□ -0.24
Col5a1-201ENSMUST00000028280 BC035947B2RQY6 695 aa13.57□□□□□ -0.24
Col5a1-201ENSMUST00000028280 Gm3183D3YUJ6 481 aa13.57□□□□□ -0.24
Retrieved 100 of 22,080 RNA–protein pairs in 35.6 ms