RNA–Protein interactions for RNA: ENST00000636792.1

UPF3B-205, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3B, Length 834 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-205ENST00000636792 SIM1P81133 766 aaPredicted RBP6.44□□□□□ -1.38
UPF3B-205ENST00000636792 IRF8Q02556 426 aa6.44□□□□□ -1.38
UPF3B-205ENST00000636792 CSTF3Q12996 717 aaKnown RBP6.44□□□□□ -1.38
UPF3B-205ENST00000636792 TRAF3Q13114 568 aa6.44□□□□□ -1.38
UPF3B-205ENST00000636792 FASTKQ14296 549 aaKnown RBP6.44□□□□□ -1.38
UPF3B-205ENST00000636792 IL11RAQ14626 422 aa6.44□□□□□ -1.38
UPF3B-205ENST00000636792 ZXDCQ2QGD7 858 aaPredicted RBP6.44□□□□□ -1.38
UPF3B-205ENST00000636792 UNC50Q53HI1 259 aa6.44□□□□□ -1.38
UPF3B-205ENST00000636792 CACHD1Q5VU97 1274 aa6.44□□□□□ -1.38
UPF3B-205ENST00000636792 GARNL3Q5VVW2 1013 aa6.44□□□□□ -1.38
UPF3B-205ENST00000636792 MED27Q6P2C8 311 aa6.44□□□□□ -1.38
UPF3B-205ENST00000636792 C16orf46Q6P387 395 aa6.44□□□□□ -1.38
UPF3B-205ENST00000636792 NXPE4Q6UWF7 544 aa6.44□□□□□ -1.38
UPF3B-205ENST00000636792 SUSD1Q6UWL2 747 aa6.44□□□□□ -1.38
UPF3B-205ENST00000636792 GPRIN3Q6ZVF9 776 aa6.44□□□□□ -1.38
UPF3B-205ENST00000636792 C10orf107Q8IVU9 208 aa6.44□□□□□ -1.38
UPF3B-205ENST00000636792 LAS2Q8IYD9 372 aa6.44□□□□□ -1.38
UPF3B-205ENST00000636792 TEX9Q8N6V9 391 aa6.44□□□□□ -1.38
UPF3B-205ENST00000636792 ANKRD42Q8N9B4 389 aa6.44□□□□□ -1.38
UPF3B-205ENST00000636792 SNX31Q8N9S9 440 aa6.44□□□□□ -1.38
UPF3B-205ENST00000636792 CAMKVQ8NCB2 501 aa6.44□□□□□ -1.38
UPF3B-205ENST00000636792 PPFIBP2Q8ND30 876 aa6.44□□□□□ -1.38
UPF3B-205ENST00000636792 SRFBP1Q8NEF9 429 aaKnown RBP6.44□□□□□ -1.38
UPF3B-205ENST00000636792 DEFB124Q8NES8 71 aa6.44□□□□□ -1.38
UPF3B-205ENST00000636792 AGAP11Q8TF27 550 aa6.44□□□□□ -1.38
UPF3B-205ENST00000636792 DYDC1Q8WWB3 177 aa6.44□□□□□ -1.38
UPF3B-205ENST00000636792 MVB12AQ96EY5 273 aa6.44□□□□□ -1.38
UPF3B-205ENST00000636792 MAGEB18Q96M61 343 aa6.44□□□□□ -1.38
UPF3B-205ENST00000636792 C7orf26Q96N11 449 aa6.44□□□□□ -1.38
UPF3B-205ENST00000636792 ZNF285Q96NJ3 590 aa6.44□□□□□ -1.38
UPF3B-205ENST00000636792 TRAPPC9Q96Q05 1148 aa6.44□□□□□ -1.38
UPF3B-205ENST00000636792 MAP3K3Q99759 626 aa6.44□□□□□ -1.38
UPF3B-205ENST00000636792 NUDT22Q9BRQ3 303 aa6.44□□□□□ -1.38
UPF3B-205ENST00000636792 CENPKQ9BS16 269 aa6.44□□□□□ -1.38
UPF3B-205ENST00000636792 DPH7Q9BTV6 452 aa6.44□□□□□ -1.38
UPF3B-205ENST00000636792 NLNQ9BYT8 704 aa6.44□□□□□ -1.38
UPF3B-205ENST00000636792 UNKQ9C0B0 810 aaKnown RBP6.44□□□□□ -1.38
UPF3B-205ENST00000636792 XKR8Q9H6D3 395 aa6.44□□□□□ -1.38
UPF3B-205ENST00000636792 ACTR8Q9H981 624 aa6.44□□□□□ -1.38
UPF3B-205ENST00000636792 BRF2Q9HAW0 419 aa6.44□□□□□ -1.38
UPF3B-205ENST00000636792 CLK4Q9HAZ1 481 aaKnown RBP6.44□□□□□ -1.38
UPF3B-205ENST00000636792 ZBTB26Q9HCK0 441 aa6.44□□□□□ -1.38
UPF3B-205ENST00000636792 SLC6A20Q9NP91 592 aa6.44□□□□□ -1.38
UPF3B-205ENST00000636792 MRGBPQ9NV56 204 aa6.44□□□□□ -1.38
UPF3B-205ENST00000636792 THAP1Q9NVV9 213 aa6.44□□□□□ -1.38
UPF3B-205ENST00000636792 SOHLH2Q9NX45 425 aa6.44□□□□□ -1.38
UPF3B-205ENST00000636792 SPHK1Q9NYA1 384 aa6.44□□□□□ -1.38
UPF3B-205ENST00000636792 PLAGL1Q9UM63 463 aa6.44□□□□□ -1.38
UPF3B-205ENST00000636792 SNX6Q9UNH7 406 aa6.44□□□□□ -1.38
UPF3B-205ENST00000636792 SRPK3Q9UPE1 567 aa6.44□□□□□ -1.38
UPF3B-205ENST00000636792 PLCL2Q9UPR0 1127 aa6.44□□□□□ -1.38
UPF3B-205ENST00000636792 RAP2CQ9Y3L5 183 aa6.44□□□□□ -1.38
UPF3B-205ENST00000636792 PCDHGA8Q9Y5G5 932 aa6.44□□□□□ -1.38
UPF3B-205ENST00000636792 AP1M2Q9Y6Q5 423 aa6.44□□□□□ -1.38
UPF3B-205ENST00000636792 PTPRZ1P23471 2315 aaPredicted RBP6.43□□□□□ -1.38
UPF3B-205ENST00000636792 MYO15AQ9UKN7 3530 aa6.43□□□□□ -1.38
UPF3B-205ENST00000636792 A0A088AWK7 358 aa6.43□□□□□ -1.38
UPF3B-205ENST00000636792 PRAMEF33A0A0G2JMD5 474 aa6.43□□□□□ -1.38
UPF3B-205ENST00000636792 FITM1A5D6W6 292 aa6.43□□□□□ -1.38
UPF3B-205ENST00000636792 FOXO6A8MYZ6 492 aa6.43□□□□□ -1.38
UPF3B-205ENST00000636792 E7EQ34 232 aa6.43□□□□□ -1.38
UPF3B-205ENST00000636792 FOXE1O00358 373 aaPredicted RBP6.43□□□□□ -1.38
UPF3B-205ENST00000636792 SNNO75324 88 aaPredicted RBP6.43□□□□□ -1.38
UPF3B-205ENST00000636792 CLEC3AO75596 197 aa6.43□□□□□ -1.38
UPF3B-205ENST00000636792 RASSF9O75901 435 aa6.43□□□□□ -1.38
UPF3B-205ENST00000636792 SEMA3DO95025 777 aa6.43□□□□□ -1.38
UPF3B-205ENST00000636792 SIX3O95343 332 aaPredicted RBP6.43□□□□□ -1.38
UPF3B-205ENST00000636792 MT-CO3P00414 261 aa6.43□□□□□ -1.38
UPF3B-205ENST00000636792 HBQ1P09105 142 aa6.43□□□□□ -1.38
UPF3B-205ENST00000636792 UROSP10746 265 aa6.43□□□□□ -1.38
UPF3B-205ENST00000636792 CDH1P12830 882 aa6.43□□□□□ -1.38
UPF3B-205ENST00000636792 HGFP14210 728 aa6.43□□□□□ -1.38
UPF3B-205ENST00000636792 ST6GAL1P15907 406 aa6.43□□□□□ -1.38
UPF3B-205ENST00000636792 EPORP19235 508 aa6.43□□□□□ -1.38
UPF3B-205ENST00000636792 ZNF10P21506 573 aaPredicted RBP6.43□□□□□ -1.38
UPF3B-205ENST00000636792 CD82P27701 267 aa6.43□□□□□ -1.38
UPF3B-205ENST00000636792 PSMB5P28074 263 aa6.43□□□□□ -1.38
UPF3B-205ENST00000636792 GDF5P43026 501 aa6.43□□□□□ -1.38
UPF3B-205ENST00000636792 GSTM5P46439 218 aa6.43□□□□□ -1.38
UPF3B-205ENST00000636792 PPM1FP49593 454 aaPredicted RBP6.43□□□□□ -1.38
UPF3B-205ENST00000636792 AGTR2P50052 363 aa6.43□□□□□ -1.38
UPF3B-205ENST00000636792 PDX1P52945 283 aa6.43□□□□□ -1.38
UPF3B-205ENST00000636792 ARSFP54793 590 aa6.43□□□□□ -1.38
UPF3B-205ENST00000636792 GFERP55789 205 aa6.43□□□□□ -1.38
UPF3B-205ENST00000636792 ABCE1P61221 599 aaKnown RBP6.43□□□□□ -1.38
UPF3B-205ENST00000636792 STXBP1P61764 594 aaKnown RBP6.43□□□□□ -1.38
UPF3B-205ENST00000636792 CSNK1G2P78368 415 aa6.43□□□□□ -1.38
UPF3B-205ENST00000636792 CFHR1Q03591 330 aa6.43□□□□□ -1.38
UPF3B-205ENST00000636792 CHIT1Q13231 466 aa6.43□□□□□ -1.38
UPF3B-205ENST00000636792 STX3Q13277 289 aa6.43□□□□□ -1.38
UPF3B-205ENST00000636792 PWP1Q13610 501 aa6.43□□□□□ -1.38
UPF3B-205ENST00000636792 TSTA3Q13630 321 aaPredicted RBP6.43□□□□□ -1.38
UPF3B-205ENST00000636792 MPP2Q14168 576 aa6.43□□□□□ -1.38
UPF3B-205ENST00000636792 CHI3L2Q15782 390 aa6.43□□□□□ -1.38
UPF3B-205ENST00000636792 ISXQ2M1V0 245 aa6.43□□□□□ -1.38
UPF3B-205ENST00000636792 SMU1Q2TAY7 513 aa6.43□□□□□ -1.38
UPF3B-205ENST00000636792 AMZ1Q400G9 498 aa6.43□□□□□ -1.38
UPF3B-205ENST00000636792 XKR6Q5GH73 641 aa6.43□□□□□ -1.38
UPF3B-205ENST00000636792 HES3Q5TGS1 186 aa6.43□□□□□ -1.38
UPF3B-205ENST00000636792 KIAA1614Q5VZ46 1190 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms