RNA–Protein interactions for RNA: ENST00000589541.5

MBD1-218, Transcript of methyl-CpG binding domain protein 1, human

TSL 3

Gene MBD1, Length 836 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MBD1-218	ENST00000589541	MAN1A2	O60476	641 aa		11.13	□□□□□ -0.63
MBD1-218	ENST00000589541	SLC19A2	O60779	497 aa		11.13	□□□□□ -0.63
MBD1-218	ENST00000589541	CYC1	P08574	325 aa		11.13	□□□□□ -0.63
MBD1-218	ENST00000589541	CDH1	P12830	882 aa		11.13	□□□□□ -0.63
MBD1-218	ENST00000589541	CA7	P43166	264 aa		11.13	□□□□□ -0.63
MBD1-218	ENST00000589541	AGTR2	P50052	363 aa		11.13	□□□□□ -0.63
MBD1-218	ENST00000589541	RBPJ	Q06330	500 aa		11.13	□□□□□ -0.63
MBD1-218	ENST00000589541	NAE1	Q13564	534 aa		11.13	□□□□□ -0.63
MBD1-218	ENST00000589541	TUBA3C	Q13748	450 aa		11.13	□□□□□ -0.63
MBD1-218	ENST00000589541	ABRAXAS2	Q15018	415 aa		11.13	□□□□□ -0.63
MBD1-218	ENST00000589541	NSDHL	Q15738	373 aa		11.13	□□□□□ -0.63
MBD1-218	ENST00000589541	ZNF800	Q2TB10	664 aa	Predicted RBP eCLIP	11.13	□□□□□ -0.63
MBD1-218	ENST00000589541	CAPN13	Q6MZZ7	669 aa	Predicted RBP	11.13	□□□□□ -0.63
MBD1-218	ENST00000589541	TUBA3E	Q6PEY2	450 aa		11.13	□□□□□ -0.63
MBD1-218	ENST00000589541	CCDC137	Q6PK04	289 aa	Known RBP	11.13	□□□□□ -0.63
MBD1-218	ENST00000589541	AGTRAP	Q6RW13	159 aa		11.13	□□□□□ -0.63
MBD1-218	ENST00000589541	MRGPRG	Q86SM5	289 aa		11.13	□□□□□ -0.63
MBD1-218	ENST00000589541	ASPG	Q86U10	573 aa		11.13	□□□□□ -0.63
MBD1-218	ENST00000589541	SLC26A11	Q86WA9	606 aa		11.13	□□□□□ -0.63
MBD1-218	ENST00000589541	PALM2	Q8IXS6	379 aa		11.13	□□□□□ -0.63
MBD1-218	ENST00000589541	SERBP1	Q8NC51	408 aa	Known RBP eCLIP	11.13	□□□□□ -0.63
MBD1-218	ENST00000589541	SLC13A3	Q8WWT9	602 aa		11.13	□□□□□ -0.63
MBD1-218	ENST00000589541	TM4SF19	Q96DZ7	209 aa		11.13	□□□□□ -0.63
MBD1-218	ENST00000589541	THAP11	Q96EK4	314 aa		11.13	□□□□□ -0.63
MBD1-218	ENST00000589541	MOCOS	Q96EN8	888 aa		11.13	□□□□□ -0.63
MBD1-218	ENST00000589541	SIGLEC10	Q96LC7	697 aa		11.13	□□□□□ -0.63
MBD1-218	ENST00000589541	ZNF354B	Q96LW1	612 aa		11.13	□□□□□ -0.63
MBD1-218	ENST00000589541	SIGLEC12	Q96PQ1	595 aa		11.13	□□□□□ -0.63
MBD1-218	ENST00000589541	FAM167B	Q9BTA0	163 aa		11.13	□□□□□ -0.63
MBD1-218	ENST00000589541	KCNK13	Q9HB14	408 aa		11.13	□□□□□ -0.63
MBD1-218	ENST00000589541	PARVB	Q9HBI1	364 aa		11.13	□□□□□ -0.63
MBD1-218	ENST00000589541	KLHL1	Q9NR64	748 aa		11.13	□□□□□ -0.63
MBD1-218	ENST00000589541	IARS2	Q9NSE4	1012 aa	Known RBP	11.13	□□□□□ -0.63
MBD1-218	ENST00000589541	NAALAD2	Q9Y3Q0	740 aa		11.13	□□□□□ -0.63
MBD1-218	ENST00000589541	NEU2	Q9Y3R4	380 aa		11.13	□□□□□ -0.63
MBD1-218	ENST00000589541	KLF2	Q9Y5W3	355 aa	Predicted RBP	11.13	□□□□□ -0.63
MBD1-218	ENST00000589541	CPAMD8	Q8IZJ3	1885 aa		11.12	□□□□□ -0.63
MBD1-218	ENST00000589541	DCHS2	Q6V1P9	2916 aa		11.12	□□□□□ -0.63
MBD1-218	ENST00000589541	EIF3F	O00303	357 aa	Predicted RBP	11.12	□□□□□ -0.63
MBD1-218	ENST00000589541	C8G	P07360	202 aa		11.12	□□□□□ -0.63
MBD1-218	ENST00000589541	SNRPB2	P08579	225 aa	Known RBP	11.12	□□□□□ -0.63
MBD1-218	ENST00000589541	SLC35G6	P0C7Q6	338 aa		11.12	□□□□□ -0.63
MBD1-218	ENST00000589541	NPPB	P16860	134 aa		11.12	□□□□□ -0.63
MBD1-218	ENST00000589541	HTR1E	P28566	365 aa		11.12	□□□□□ -0.63
MBD1-218	ENST00000589541	GRK3	P35626	688 aa		11.12	□□□□□ -0.63
MBD1-218	ENST00000589541	CD96	P40200	585 aa		11.12	□□□□□ -0.63
MBD1-218	ENST00000589541	RGS4	P49798	205 aa		11.12	□□□□□ -0.63
MBD1-218	ENST00000589541	CASP6	P55212	293 aa		11.12	□□□□□ -0.63
MBD1-218	ENST00000589541	CDKN2D	P55273	166 aa		11.12	□□□□□ -0.63
MBD1-218	ENST00000589541	TIAL1	Q01085	375 aa	Known RBP eCLIP	11.12	□□□□□ -0.63
MBD1-218	ENST00000589541	MEF2A	Q02078	507 aa	Predicted RBP	11.12	□□□□□ -0.63
MBD1-218	ENST00000589541	ACTN3	Q08043	901 aa	Predicted RBP	11.12	□□□□□ -0.63
MBD1-218	ENST00000589541	OR1C1	Q15619	314 aa		11.12	□□□□□ -0.63
MBD1-218	ENST00000589541	EXT1	Q16394	746 aa		11.12	□□□□□ -0.63
MBD1-218	ENST00000589541	PHKG1	Q16816	387 aa		11.12	□□□□□ -0.63
MBD1-218	ENST00000589541	SFT2D3	Q587I9	215 aa		11.12	□□□□□ -0.63
MBD1-218	ENST00000589541	LRRC8E	Q6NSJ5	796 aa		11.12	□□□□□ -0.63
MBD1-218	ENST00000589541	UGT3A1	Q6NUS8	523 aa		11.12	□□□□□ -0.63
MBD1-218	ENST00000589541	H3F3C	Q6NXT2	135 aa		11.12	□□□□□ -0.63
MBD1-218	ENST00000589541	MTFR2	Q6P444	385 aa		11.12	□□□□□ -0.63
MBD1-218	ENST00000589541	PAPD4	Q6PIY7	484 aa	Known RBP	11.12	□□□□□ -0.63
MBD1-218	ENST00000589541	PAQR3	Q6TCH7	311 aa		11.12	□□□□□ -0.63
MBD1-218	ENST00000589541	CRLF3	Q8IUI8	442 aa		11.12	□□□□□ -0.63
MBD1-218	ENST00000589541	MYO1H	Q8N1T3	1032 aa		11.12	□□□□□ -0.63
MBD1-218	ENST00000589541	RASGEF1C	Q8N431	466 aa		11.12	□□□□□ -0.63
MBD1-218	ENST00000589541	NAT8L	Q8N9F0	302 aa		11.12	□□□□□ -0.63
MBD1-218	ENST00000589541	OR5T3	Q8NGG3	340 aa		11.12	□□□□□ -0.63
MBD1-218	ENST00000589541	PEX11G	Q96HA9	241 aa		11.12	□□□□□ -0.63
MBD1-218	ENST00000589541	UTP23	Q9BRU9	249 aa	Known RBP	11.12	□□□□□ -0.63
MBD1-218	ENST00000589541	SGPP1	Q9BX95	441 aa		11.12	□□□□□ -0.63
MBD1-218	ENST00000589541	HES7	Q9BYE0	225 aa		11.12	□□□□□ -0.63
MBD1-218	ENST00000589541	TSPAN10	Q9H1Z9	355 aa	Predicted RBP	11.12	□□□□□ -0.63
MBD1-218	ENST00000589541	RUBCNL	Q9H714	662 aa		11.12	□□□□□ -0.63
MBD1-218	ENST00000589541	TAS2R13	Q9NYV9	303 aa		11.12	□□□□□ -0.63
MBD1-218	ENST00000589541	TINAG	Q9UJW2	476 aa		11.12	□□□□□ -0.63
MBD1-218	ENST00000589541	MYO7B	Q6PIF6	2116 aa		11.12	□□□□□ -0.63
MBD1-218	ENST00000589541	TTI1	O43156	1089 aa		11.11	□□□□□ -0.63
MBD1-218	ENST00000589541	NDUFS4	O43181	175 aa		11.11	□□□□□ -0.63
MBD1-218	ENST00000589541	OR1F1	O43749	312 aa		11.11	□□□□□ -0.63
MBD1-218	ENST00000589541	PGAM1	P18669	254 aa		11.11	□□□□□ -0.63
MBD1-218	ENST00000589541	CCND1	P24385	295 aa		11.11	□□□□□ -0.63
MBD1-218	ENST00000589541	ELAVL4	P26378	380 aa	Known RBP	11.11	□□□□□ -0.63
MBD1-218	ENST00000589541	GABRB3	P28472	473 aa		11.11	□□□□□ -0.63
MBD1-218	ENST00000589541	RHAG	Q02094	409 aa		11.11	□□□□□ -0.63
MBD1-218	ENST00000589541	OC90	Q02509	493 aa	Predicted RBP	11.11	□□□□□ -0.63
MBD1-218	ENST00000589541	DHX9	Q08211	1270 aa	Known RBP	11.11	□□□□□ -0.63
MBD1-218	ENST00000589541	SP140	Q13342	867 aa		11.11	□□□□□ -0.63
MBD1-218	ENST00000589541	CRYM	Q14894	314 aa		11.11	□□□□□ -0.63
MBD1-218	ENST00000589541	HERC3	Q15034	1050 aa		11.11	□□□□□ -0.63
MBD1-218	ENST00000589541	C3AR1	Q16581	482 aa		11.11	□□□□□ -0.63
MBD1-218	ENST00000589541	CYP1B1	Q16678	543 aa		11.11	□□□□□ -0.63
MBD1-218	ENST00000589541	MEP1A	Q16819	746 aa		11.11	□□□□□ -0.63
MBD1-218	ENST00000589541	RBM20	Q5T481	1227 aa	Known RBP	11.11	□□□□□ -0.63
MBD1-218	ENST00000589541	SPINK14	Q6IE38	97 aa		11.11	□□□□□ -0.63
MBD1-218	ENST00000589541	RPTN	Q6XPR3	784 aa		11.11	□□□□□ -0.63
MBD1-218	ENST00000589541	BNC2	Q6ZN30	1099 aa	Predicted RBP	11.11	□□□□□ -0.63
MBD1-218	ENST00000589541	PCGF5	Q86SE9	256 aa		11.11	□□□□□ -0.63
MBD1-218	ENST00000589541	LRRC8A	Q8IWT6	810 aa		11.11	□□□□□ -0.63
MBD1-218	ENST00000589541	PPIL6	Q8IXY8	311 aa		11.11	□□□□□ -0.63
MBD1-218	ENST00000589541	ZNF808	Q8N4W9	903 aa	Predicted RBP	11.11	□□□□□ -0.63

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