RNA–Protein interactions for RNA: ENST00000556765.1

TRAPPC6B-206, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 3

Gene TRAPPC6B, Length 664 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-206ENST00000556765 PRPF19Q9UMS4 504 aaKnown RBP13.72□□□□□ -0.21
TRAPPC6B-206ENST00000556765 ASB1Q9Y576 335 aa13.72□□□□□ -0.21
TRAPPC6B-206ENST00000556765 PCDHB11Q9Y5F2 797 aa13.72□□□□□ -0.21
TRAPPC6B-206ENST00000556765 HEBP2Q9Y5Z4 205 aa13.72□□□□□ -0.21
TRAPPC6B-206ENST00000556765 HS3ST3A1Q9Y663 406 aa13.72□□□□□ -0.21
TRAPPC6B-206ENST00000556765 KCNE2Q9Y6J6 123 aa13.72□□□□□ -0.21
TRAPPC6B-206ENST00000556765 A1L4Q6 167 aa13.71□□□□□ -0.21
TRAPPC6B-206ENST00000556765 PPP6CO00743 305 aa13.71□□□□□ -0.21
TRAPPC6B-206ENST00000556765 CIB2O75838 187 aa13.71□□□□□ -0.21
TRAPPC6B-206ENST00000556765 SLC35G4P0C7Q5 338 aa13.71□□□□□ -0.21
TRAPPC6B-206ENST00000556765 JMJD7P0C870 316 aa13.71□□□□□ -0.21
TRAPPC6B-206ENST00000556765 GNAZP19086 355 aa13.71□□□□□ -0.21
TRAPPC6B-206ENST00000556765 PRPH2P23942 346 aa13.71□□□□□ -0.21
TRAPPC6B-206ENST00000556765 MAPK1P28482 360 aa13.71□□□□□ -0.21
TRAPPC6B-206ENST00000556765 PRDX3P30048 256 aaKnown RBP13.71□□□□□ -0.21
TRAPPC6B-206ENST00000556765 PGM1P36871 562 aa13.71□□□□□ -0.21
TRAPPC6B-206ENST00000556765 CASP2P42575 452 aa13.71□□□□□ -0.21
TRAPPC6B-206ENST00000556765 CLCNKAP51800 687 aa13.71□□□□□ -0.21
TRAPPC6B-206ENST00000556765 EMX2Q04743 252 aa13.71□□□□□ -0.21
TRAPPC6B-206ENST00000556765 CSTF3Q12996 717 aaKnown RBP13.71□□□□□ -0.21
TRAPPC6B-206ENST00000556765 LRP8Q14114 963 aa13.71□□□□□ -0.21
TRAPPC6B-206ENST00000556765 E2F2Q14209 437 aa13.71□□□□□ -0.21
TRAPPC6B-206ENST00000556765 DEFB133Q30KQ1 61 aa13.71□□□□□ -0.21
TRAPPC6B-206ENST00000556765 FBXO48Q5FWF7 155 aa13.71□□□□□ -0.21
TRAPPC6B-206ENST00000556765 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.71□□□□□ -0.21
TRAPPC6B-206ENST00000556765 CYB5D1Q6P9G0 228 aa13.71□□□□□ -0.21
TRAPPC6B-206ENST00000556765 CRTC3Q6UUV7 619 aa13.71□□□□□ -0.21
TRAPPC6B-206ENST00000556765 HACD2Q6Y1H2 254 aa13.71□□□□□ -0.21
TRAPPC6B-206ENST00000556765 RINLQ6ZS11 566 aa13.71□□□□□ -0.21
TRAPPC6B-206ENST00000556765 TBC1D21Q8IYX1 336 aa13.71□□□□□ -0.21
TRAPPC6B-206ENST00000556765 KIF2BQ8N4N8 673 aa13.71□□□□□ -0.21
TRAPPC6B-206ENST00000556765 KYQ8NBH2 561 aa13.71□□□□□ -0.21
TRAPPC6B-206ENST00000556765 PCYOX1LQ8NBM8 494 aa13.71□□□□□ -0.21
TRAPPC6B-206ENST00000556765 OR5K2Q8NHB8 316 aa13.71□□□□□ -0.21
TRAPPC6B-206ENST00000556765 C9orf43Q8TAL5 461 aaPredicted RBP13.71□□□□□ -0.21
TRAPPC6B-206ENST00000556765 KLK6Q92876 244 aa13.71□□□□□ -0.21
TRAPPC6B-206ENST00000556765 ESAMQ96AP7 390 aa13.71□□□□□ -0.21
TRAPPC6B-206ENST00000556765 KCNA7Q96RP8 456 aa13.71□□□□□ -0.21
TRAPPC6B-206ENST00000556765 CCDC3Q9BQI4 270 aa13.71□□□□□ -0.21
TRAPPC6B-206ENST00000556765 CADM1Q9BY67 442 aaKnown RBP13.71□□□□□ -0.21
TRAPPC6B-206ENST00000556765 MRPL1Q9BYD6 325 aaKnown RBP13.71□□□□□ -0.21
TRAPPC6B-206ENST00000556765 STRADBQ9C0K7 418 aa13.71□□□□□ -0.21
TRAPPC6B-206ENST00000556765 ZNF768Q9H5H4 540 aaKnown RBP13.71□□□□□ -0.21
TRAPPC6B-206ENST00000556765 FZD3Q9NPG1 666 aa13.71□□□□□ -0.21
TRAPPC6B-206ENST00000556765 MBNL1Q9NR56 388 aaKnown RBP13.71□□□□□ -0.21
TRAPPC6B-206ENST00000556765 NOP53Q9NZM5 478 aaKnown RBP13.71□□□□□ -0.21
TRAPPC6B-206ENST00000556765 GULP1Q9UBP9 304 aa13.71□□□□□ -0.21
TRAPPC6B-206ENST00000556765 PISDQ9UG56 409 aa13.71□□□□□ -0.21
TRAPPC6B-206ENST00000556765 PRDM4Q9UKN5 801 aa13.71□□□□□ -0.21
TRAPPC6B-206ENST00000556765 TMED5Q9Y3A6 229 aa13.71□□□□□ -0.21
TRAPPC6B-206ENST00000556765 TIMM22Q9Y584 194 aa13.71□□□□□ -0.21
TRAPPC6B-206ENST00000556765 CSNK1G3Q9Y6M4 447 aa13.71□□□□□ -0.21
TRAPPC6B-206ENST00000556765 DNHD1Q96M86 4753 aa13.71□□□□□ -0.22
TRAPPC6B-206ENST00000556765 PRRC2CQ9Y520 2896 aaKnown RBP13.7□□□□□ -0.22
TRAPPC6B-206ENST00000556765 PRAMEF33A0A0G2JMD5 474 aa13.7□□□□□ -0.22
TRAPPC6B-206ENST00000556765 NTN3O00634 580 aaPredicted RBP13.7□□□□□ -0.22
TRAPPC6B-206ENST00000556765 PRAMEF10O60809 474 aa13.7□□□□□ -0.22
TRAPPC6B-206ENST00000556765 RSL1D1O76021 490 aaKnown RBP13.7□□□□□ -0.22
TRAPPC6B-206ENST00000556765 SNRPB2P08579 225 aaKnown RBP13.7□□□□□ -0.22
TRAPPC6B-206ENST00000556765 LINC00032P0C843 101 aa13.7□□□□□ -0.22
TRAPPC6B-206ENST00000556765 IMPA1P29218 277 aa13.7□□□□□ -0.22
TRAPPC6B-206ENST00000556765 PDHA2P29803 388 aa13.7□□□□□ -0.22
TRAPPC6B-206ENST00000556765 CLDN2P57739 230 aa13.7□□□□□ -0.22
TRAPPC6B-206ENST00000556765 PFN3P60673 137 aa13.7□□□□□ -0.22
TRAPPC6B-206ENST00000556765 LAPTM5Q13571 262 aa13.7□□□□□ -0.22
TRAPPC6B-206ENST00000556765 CUL3Q13618 768 aa13.7□□□□□ -0.22
TRAPPC6B-206ENST00000556765 NFE2L1Q14494 772 aa13.7□□□□□ -0.22
TRAPPC6B-206ENST00000556765 NFATC4Q14934 902 aa13.7□□□□□ -0.22
TRAPPC6B-206ENST00000556765 IMPG1Q17R60 797 aa13.7□□□□□ -0.22
TRAPPC6B-206ENST00000556765 TRMT5Q32P41 509 aaKnown RBP13.7□□□□□ -0.22
TRAPPC6B-206ENST00000556765 FHL5Q5TD97 284 aa13.7□□□□□ -0.22
TRAPPC6B-206ENST00000556765 TMEM198Q66K66 360 aa13.7□□□□□ -0.22
TRAPPC6B-206ENST00000556765 GRHL2Q6ISB3 625 aa13.7□□□□□ -0.22
TRAPPC6B-206ENST00000556765 DOK6Q6PKX4 331 aa13.7□□□□□ -0.22
TRAPPC6B-206ENST00000556765 THOC6Q86W42 341 aaKnown RBP13.7□□□□□ -0.22
TRAPPC6B-206ENST00000556765 SNX32Q86XE0 403 aa13.7□□□□□ -0.22
TRAPPC6B-206ENST00000556765 DTX1Q86Y01 620 aa13.7□□□□□ -0.22
TRAPPC6B-206ENST00000556765 NAT6Q93015 286 aa13.7□□□□□ -0.22
TRAPPC6B-206ENST00000556765 UBE2E3Q969T4 207 aa13.7□□□□□ -0.22
TRAPPC6B-206ENST00000556765 ROPN1LQ96C74 230 aa13.7□□□□□ -0.22
TRAPPC6B-206ENST00000556765 C3orf30Q96M34 536 aa13.7□□□□□ -0.22
TRAPPC6B-206ENST00000556765 PKP4Q99569 1192 aa13.7□□□□□ -0.22
TRAPPC6B-206ENST00000556765 HAUS8Q9BT25 410 aa13.7□□□□□ -0.22
TRAPPC6B-206ENST00000556765 EFCAB11Q9BUY7 163 aa13.7□□□□□ -0.22
TRAPPC6B-206ENST00000556765 TRIT1Q9H3H1 467 aaKnown RBP13.7□□□□□ -0.22
TRAPPC6B-206ENST00000556765 ELOVL6Q9H5J4 265 aa13.7□□□□□ -0.22
TRAPPC6B-206ENST00000556765 AIG1Q9NVV5 245 aa13.7□□□□□ -0.22
TRAPPC6B-206ENST00000556765 KLQ9UEF7 1012 aa13.7□□□□□ -0.22
TRAPPC6B-206ENST00000556765 BCAP29Q9UHQ4 241 aa13.7□□□□□ -0.22
TRAPPC6B-206ENST00000556765 MAPRE3Q9UPY8 281 aa13.7□□□□□ -0.22
TRAPPC6B-206ENST00000556765 EIF3LQ9Y262 564 aaKnown RBP13.7□□□□□ -0.22
TRAPPC6B-206ENST00000556765 BTRCQ9Y297 605 aa13.7□□□□□ -0.22
TRAPPC6B-206ENST00000556765 TMEM98Q9Y2Y6 226 aa13.7□□□□□ -0.22
TRAPPC6B-206ENST00000556765 NDUFAF1Q9Y375 327 aa13.7□□□□□ -0.22
TRAPPC6B-206ENST00000556765 DYRK1BQ9Y463 629 aa13.7□□□□□ -0.22
TRAPPC6B-206ENST00000556765 PCDHGA11Q9Y5H2 935 aa13.7□□□□□ -0.22
TRAPPC6B-206ENST00000556765 MED13Q9UHV7 2174 aa13.69□□□□□ -0.22
TRAPPC6B-206ENST00000556765 PDZD2O15018 2839 aa13.69□□□□□ -0.22
TRAPPC6B-206ENST00000556765 H0YIV9 168 aa13.69□□□□□ -0.22
TRAPPC6B-206ENST00000556765 TMX2-CTNND1H3BSU7 103 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms